RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 H0Y3Z8 333 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 J3QW42 95 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 NBNO60934 754 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 ECEL1O95672 775 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 FAM157BP0CG42 384 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 SLC5A1P13866 664 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 PHKG2P15735 406 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 DDIT3P35638 169 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 IGFALSP35858 605 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 UBA7P41226 1012 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 PDE4BQ07343 736 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 ABCB5Q2M3G0 1257 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 KIAA1614Q5VZ46 1190 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 UBE2R2Q712K3 238 aaPredicted RBP6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 MCM10Q7L590 875 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 PDZD3Q86UT5 571 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 MIGA1Q8NAN2 632 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 BHMTQ93088 406 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 SH3KBP1Q96B97 665 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 STRBPQ96SI9 672 aaKnown RBP6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 NELL2Q99435 816 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 CSRNP2Q9H175 543 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 NUCKS1Q9H1E3 243 aaKnown RBP6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 SLC52A2Q9HAB3 445 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 DIAPH3Q9NSV4 1193 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 FAM86C1Q9NVL1 165 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 CEP131Q9UPN4 1083 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 SNCAIPQ9Y6H5 919 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 FAM135AQ9P2D6 1515 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 CLASP1Q7Z460 1538 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 ANO9A1A5B4 782 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 EFSO43281 561 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 DNAJA2O60884 412 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 SMNDC1O75940 238 aaKnown RBP eCLIP6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 TPM3P06753 285 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 ID4P47928 161 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 GABREP78334 506 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 SMC1AQ14683 1233 aaKnown RBP6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 KIF22Q14807 665 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 IQSEC1Q6DN90 963 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 FGD2Q7Z6J4 655 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 DHRS1Q96LJ7 313 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 GRPEL1Q9HAV7 217 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 LRRC4BQ9NT99 713 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 PNMA8BQ9ULN7 279 aaPredicted RBP6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 ANKRD6Q9Y2G4 727 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 IPPQ9Y573 584 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 MAGED1Q9Y5V3 778 aaPredicted RBP6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 UHRF1BP1LA0JNW5 1464 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 RALGAPBQ86X10 1494 aa6.7□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 ZCCHC11Q5TAX3 1644 aaKnown RBP6.69□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 PLXNC1O60486 1568 aa6.69□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 ATXN7O15265 892 aaPredicted RBP6.69□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 APBA3O96018 575 aa6.69□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 GHRHP01286 108 aa6.69□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 F11P03951 625 aa6.69□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 ITGAVP06756 1048 aa6.69□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 MYBL2P10244 700 aa6.69□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 PF4V1P10720 104 aa6.69□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 RAG1P15918 1043 aa6.69□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 BPIP17213 487 aa6.69□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 SPEM2Q0P670 501 aa6.69□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 GRB10Q13322 594 aa6.69□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 SART3Q15020 963 aaKnown RBP6.69□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 CEP135Q66GS9 1140 aa6.69□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 FIGNL1Q6PIW4 674 aa6.69□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 HDXQ7Z353 690 aa6.69□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 CLIP3Q96DZ5 547 aa6.69□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 PLPPR2Q96GM1 343 aa6.69□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 MENTQ9BUN1 341 aa6.69□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 CARD11Q9BXL7 1154 aa6.69□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 MRGBPQ9NV56 204 aa6.69□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 TRMT1Q9NXH9 659 aaKnown RBP6.69□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 NUDCQ9Y266 331 aa6.69□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 DCDC2BA2VCK2 349 aa6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 GSTP1P09211 210 aaKnown RBP6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 SETSIPP0DME0 302 aa6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 SLC19A1P41440 591 aa6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 GRIA2P42262 883 aa6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 HFE2Q6ZVN8 426 aa6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 RSRC2Q7L4I2 434 aaKnown RBP6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 TTC17Q96AE7 1141 aa6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 TCF7L1Q9HCS4 588 aa6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 MAN1C1Q9NR34 630 aa6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 FAM50BQ9Y247 325 aa6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 MORC2Q9Y6X9 1032 aaPredicted RBP6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 CCDC144AA2RUR9 1427 aa6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 PLCH2O75038 1416 aa6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 UNC13BO14795 1591 aa6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 KDM5CP41229 1560 aa6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 CCDC66A2RUB6 948 aa6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 J3QL48 77 aa6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 PGRP06401 933 aa6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 EPHX1P07099 455 aa6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 C6orf222P0C671 652 aaPredicted RBP6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 ZNF853P0CG23 659 aa6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 KCNJ4P48050 445 aa6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 COPAP53621 1224 aa6.68□□□□□ -1.34
ALMS1-IT1-201ENST00000441587 FOXC1Q12948 553 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms