RNA–Protein interactions for RNA: ENST00000440652.5

UBE2D4-203, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 1,299 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-203ENST00000440652 ZNF512BQ96KM6 892 aaPredicted RBP8.12□□□□□ -1.11
UBE2D4-203ENST00000440652 TM6SF1Q9BZW5 370 aa8.12□□□□□ -1.11
UBE2D4-203ENST00000440652 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.12□□□□□ -1.11
UBE2D4-203ENST00000440652 OSBPL5Q9H0X9 879 aaPredicted RBP8.12□□□□□ -1.11
UBE2D4-203ENST00000440652 GNL3LQ9NVN8 582 aaKnown RBP8.12□□□□□ -1.11
UBE2D4-203ENST00000440652 PRKAG2Q9UGJ0 569 aa8.12□□□□□ -1.11
UBE2D4-203ENST00000440652 DENND2AQ9ULE3 1009 aa8.12□□□□□ -1.11
UBE2D4-203ENST00000440652 PALD1Q9ULE6 856 aa8.12□□□□□ -1.11
UBE2D4-203ENST00000440652 RBM8AQ9Y5S9 174 aaKnown RBP8.12□□□□□ -1.11
UBE2D4-203ENST00000440652 A0A0D9SFI3 127 aa8.11□□□□□ -1.11
UBE2D4-203ENST00000440652 SHISA8B8ZZ34 492 aa8.11□□□□□ -1.11
UBE2D4-203ENST00000440652 CYP2C19P33261 490 aa8.11□□□□□ -1.11
UBE2D4-203ENST00000440652 CAP2P40123 477 aa8.11□□□□□ -1.11
UBE2D4-203ENST00000440652 ERVK-24P63145 666 aa8.11□□□□□ -1.11
UBE2D4-203ENST00000440652 KRT32Q14532 448 aa8.11□□□□□ -1.11
UBE2D4-203ENST00000440652 NECTIN1Q15223 517 aa8.11□□□□□ -1.11
UBE2D4-203ENST00000440652 TEAD4Q15561 434 aa8.11□□□□□ -1.11
UBE2D4-203ENST00000440652 TRIM60Q495X7 471 aa8.11□□□□□ -1.11
UBE2D4-203ENST00000440652 ZMYM1Q5SVZ6 1142 aa8.11□□□□□ -1.11
UBE2D4-203ENST00000440652 GJC2Q5T442 439 aaPredicted RBP8.11□□□□□ -1.11
UBE2D4-203ENST00000440652 CREB3L3Q68CJ9 461 aa8.11□□□□□ -1.11
UBE2D4-203ENST00000440652 PPM1EQ8WY54 764 aa8.11□□□□□ -1.11
UBE2D4-203ENST00000440652 DNAJC18Q9H819 358 aa8.11□□□□□ -1.11
UBE2D4-203ENST00000440652 TMOD4Q9NZQ9 345 aa8.11□□□□□ -1.11
UBE2D4-203ENST00000440652 HMG20BQ9P0W2 317 aa8.11□□□□□ -1.11
UBE2D4-203ENST00000440652 RBPJLQ9UBG7 517 aa8.11□□□□□ -1.11
UBE2D4-203ENST00000440652 DDX20Q9UHI6 824 aaKnown RBP8.11□□□□□ -1.11
UBE2D4-203ENST00000440652 GDF2Q9UK05 429 aaPredicted RBP8.11□□□□□ -1.11
UBE2D4-203ENST00000440652 CYP46A1Q9Y6A2 500 aa8.11□□□□□ -1.11
UBE2D4-203ENST00000440652 DNMT3AQ9Y6K1 912 aaPredicted RBP8.11□□□□□ -1.11
UBE2D4-203ENST00000440652 RLFQ13129 1914 aa8.1□□□□□ -1.11
UBE2D4-203ENST00000440652 SLC27A2O14975 620 aa8.1□□□□□ -1.11
UBE2D4-203ENST00000440652 DKK1O94907 266 aa8.1□□□□□ -1.11
UBE2D4-203ENST00000440652 BMP4P12644 408 aa8.1□□□□□ -1.11
UBE2D4-203ENST00000440652 XRCC5P13010 732 aaKnown RBP8.1□□□□□ -1.11
UBE2D4-203ENST00000440652 MAPK4P31152 587 aa8.1□□□□□ -1.11
UBE2D4-203ENST00000440652 ZAP70P43403 619 aa8.1□□□□□ -1.11
UBE2D4-203ENST00000440652 EPHB4P54760 987 aa8.1□□□□□ -1.11
UBE2D4-203ENST00000440652 NUCB2P80303 420 aa8.1□□□□□ -1.11
UBE2D4-203ENST00000440652 TNP2Q05952 138 aa8.1□□□□□ -1.11
UBE2D4-203ENST00000440652 PLEKHH3Q7Z736 793 aa8.1□□□□□ -1.11
UBE2D4-203ENST00000440652 TRPV1Q8NER1 839 aa8.1□□□□□ -1.11
UBE2D4-203ENST00000440652 NEDD1Q8NHV4 660 aa8.1□□□□□ -1.11
UBE2D4-203ENST00000440652 USP6NLQ92738 828 aa8.1□□□□□ -1.11
UBE2D4-203ENST00000440652 ZSCAN31Q96LW9 406 aaPredicted RBP8.1□□□□□ -1.11
UBE2D4-203ENST00000440652 JAKMIP1Q96N16 626 aaKnown RBP8.1□□□□□ -1.11
UBE2D4-203ENST00000440652 IL25Q9H293 177 aa8.1□□□□□ -1.11
UBE2D4-203ENST00000440652 AS3MTQ9HBK9 375 aa8.1□□□□□ -1.11
UBE2D4-203ENST00000440652 PDLIM7Q9NR12 457 aa8.1□□□□□ -1.11
UBE2D4-203ENST00000440652 PDRG1Q9NUG6 133 aa8.1□□□□□ -1.11
UBE2D4-203ENST00000440652 CTNNA3Q9UI47 895 aa8.1□□□□□ -1.11
UBE2D4-203ENST00000440652 LIMCH1Q9UPQ0 1083 aa8.1□□□□□ -1.11
UBE2D4-203ENST00000440652 GPR75-ASB3A0A0A6YYF3 556 aa8.09□□□□□ -1.11
UBE2D4-203ENST00000440652 TRIM43BA6NCK2 446 aa8.09□□□□□ -1.11
UBE2D4-203ENST00000440652 DNM1LO00429 736 aa8.09□□□□□ -1.11
UBE2D4-203ENST00000440652 ATXN7O15265 892 aaPredicted RBP8.09□□□□□ -1.11
UBE2D4-203ENST00000440652 CNMDO75829 334 aa8.09□□□□□ -1.11
UBE2D4-203ENST00000440652 CASTP20810 708 aaKnown RBP8.09□□□□□ -1.11
UBE2D4-203ENST00000440652 PTMSP20962 102 aa8.09□□□□□ -1.11
UBE2D4-203ENST00000440652 ITGB8P26012 769 aa8.09□□□□□ -1.11
UBE2D4-203ENST00000440652 TXLNAP40222 546 aa8.09□□□□□ -1.11
UBE2D4-203ENST00000440652 BACE1P56817 501 aa8.09□□□□□ -1.11
UBE2D4-203ENST00000440652 GRIN2CQ14957 1233 aa8.09□□□□□ -1.11
UBE2D4-203ENST00000440652 ANKRD1Q15327 319 aa8.09□□□□□ -1.11
UBE2D4-203ENST00000440652 SAMD5Q5TGI4 173 aa8.09□□□□□ -1.11
UBE2D4-203ENST00000440652 VPS53Q5VIR6 699 aa8.09□□□□□ -1.11
UBE2D4-203ENST00000440652 SLCO4C1Q6ZQN7 724 aa8.09□□□□□ -1.11
UBE2D4-203ENST00000440652 SLC9A9Q8IVB4 645 aa8.09□□□□□ -1.11
UBE2D4-203ENST00000440652 TEX11Q8IYF3 940 aa8.09□□□□□ -1.11
UBE2D4-203ENST00000440652 ZGPATQ8N5A5 531 aaKnown RBP8.09□□□□□ -1.11
UBE2D4-203ENST00000440652 BEND7Q8N7W2 519 aaPredicted RBP8.09□□□□□ -1.11
UBE2D4-203ENST00000440652 GOLGA6L1Q8N7Z2 621 aa8.09□□□□□ -1.11
UBE2D4-203ENST00000440652 TPCN2Q8NHX9 752 aa8.09□□□□□ -1.11
UBE2D4-203ENST00000440652 NPLOC4Q8TAT6 608 aa8.09□□□□□ -1.11
UBE2D4-203ENST00000440652 SH3RF3Q8TEJ3 882 aaPredicted RBP8.09□□□□□ -1.11
UBE2D4-203ENST00000440652 FERMT2Q96AC1 680 aa8.09□□□□□ -1.11
UBE2D4-203ENST00000440652 TRIM43Q96BQ3 446 aaPredicted RBP8.09□□□□□ -1.11
UBE2D4-203ENST00000440652 TMX3Q96JJ7 454 aa8.09□□□□□ -1.11
UBE2D4-203ENST00000440652 RNPC3Q96LT9 517 aaKnown RBP8.09□□□□□ -1.11
UBE2D4-203ENST00000440652 GBP4Q96PP9 640 aa8.09□□□□□ -1.11
UBE2D4-203ENST00000440652 UPF3BQ9BZI7 483 aaKnown RBP8.09□□□□□ -1.11
UBE2D4-203ENST00000440652 CDK5RAP2Q96SN8 1893 aa8.09□□□□□ -1.12
UBE2D4-203ENST00000440652 A6NJR5 290 aa8.08□□□□□ -1.12
UBE2D4-203ENST00000440652 EML1O00423 815 aa8.08□□□□□ -1.12
UBE2D4-203ENST00000440652 FAM157BP0CG42 384 aa8.08□□□□□ -1.12
UBE2D4-203ENST00000440652 ARAFP10398 606 aa8.08□□□□□ -1.12
UBE2D4-203ENST00000440652 MAPTP10636 758 aaKnown RBP8.08□□□□□ -1.12
UBE2D4-203ENST00000440652 HOXB4P17483 251 aaPredicted RBP8.08□□□□□ -1.12
UBE2D4-203ENST00000440652 ARID4AP29374 1257 aaPredicted RBP8.08□□□□□ -1.12
UBE2D4-203ENST00000440652 DDIT3P35638 169 aa8.08□□□□□ -1.12
UBE2D4-203ENST00000440652 PLA2G5P39877 138 aa8.08□□□□□ -1.12
UBE2D4-203ENST00000440652 ATP1A2P50993 1020 aa8.08□□□□□ -1.12
UBE2D4-203ENST00000440652 SMAD3P84022 425 aaKnown RBP8.08□□□□□ -1.12
UBE2D4-203ENST00000440652 MAP3K12Q12852 859 aa8.08□□□□□ -1.12
UBE2D4-203ENST00000440652 CUL4AQ13619 759 aa8.08□□□□□ -1.12
UBE2D4-203ENST00000440652 ARSJQ5FYB0 599 aaPredicted RBP8.08□□□□□ -1.12
UBE2D4-203ENST00000440652 MFSD14CQ5VZR4 134 aa8.08□□□□□ -1.12
UBE2D4-203ENST00000440652 BLOC1S2Q6QNY1 142 aa8.08□□□□□ -1.12
UBE2D4-203ENST00000440652 RUFY3Q7L099 469 aa8.08□□□□□ -1.12
UBE2D4-203ENST00000440652 MAPKAPK5Q8IW41 473 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms