RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 MRPL42Q9Y6G3 142 aaKnown RBP5.44□□□□□ -1.54
TRAPPC13-204ENST00000438419 A0A1W2PQJ5 194 aa5.43□□□□□ -1.54
TRAPPC13-204ENST00000438419 TLDC2A0PJX2 215 aa5.43□□□□□ -1.54
TRAPPC13-204ENST00000438419 ABLIM1O14639 778 aa5.43□□□□□ -1.54
TRAPPC13-204ENST00000438419 GLDCP23378 1020 aa5.43□□□□□ -1.54
TRAPPC13-204ENST00000438419 MAPKAPK2P49137 400 aa5.43□□□□□ -1.54
TRAPPC13-204ENST00000438419 GTF2A2P52657 109 aa5.43□□□□□ -1.54
TRAPPC13-204ENST00000438419 DLG4P78352 724 aa5.43□□□□□ -1.54
TRAPPC13-204ENST00000438419 STYK1Q6J9G0 422 aa5.43□□□□□ -1.54
TRAPPC13-204ENST00000438419 GIMAP6Q6P9H5 292 aa5.43□□□□□ -1.54
TRAPPC13-204ENST00000438419 MAMDC2Q7Z304 686 aaPredicted RBP5.43□□□□□ -1.54
TRAPPC13-204ENST00000438419 Q8N1Y9 231 aa5.43□□□□□ -1.54
TRAPPC13-204ENST00000438419 SYNPOQ8N3V7 929 aa5.43□□□□□ -1.54
TRAPPC13-204ENST00000438419 CDIP1Q9H305 208 aa5.43□□□□□ -1.54
TRAPPC13-204ENST00000438419 GPR27Q9NS67 375 aa5.43□□□□□ -1.54
TRAPPC13-204ENST00000438419 BTG4Q9NY30 223 aa5.43□□□□□ -1.54
TRAPPC13-204ENST00000438419 JAG2Q9Y219 1238 aa5.43□□□□□ -1.54
TRAPPC13-204ENST00000438419 SHROOM4Q9ULL8 1493 aa5.43□□□□□ -1.54
TRAPPC13-204ENST00000438419 ESYT3A0FGR9 886 aa5.42□□□□□ -1.54
TRAPPC13-204ENST00000438419 C22orf46C9J442 243 aa5.42□□□□□ -1.54
TRAPPC13-204ENST00000438419 F8W031 263 aaPredicted RBP5.42□□□□□ -1.54
TRAPPC13-204ENST00000438419 SEMA7AO75326 666 aa5.42□□□□□ -1.54
TRAPPC13-204ENST00000438419 TSPAN15O95858 294 aa5.42□□□□□ -1.54
TRAPPC13-204ENST00000438419 NTRK1P04629 796 aa5.42□□□□□ -1.54
TRAPPC13-204ENST00000438419 FPR2P25090 351 aa5.42□□□□□ -1.54
TRAPPC13-204ENST00000438419 CDR1P51861 262 aa5.42□□□□□ -1.54
TRAPPC13-204ENST00000438419 EPHB3P54753 998 aa5.42□□□□□ -1.54
TRAPPC13-204ENST00000438419 RPL11P62913 178 aaKnown RBP5.42□□□□□ -1.54
TRAPPC13-204ENST00000438419 GABREP78334 506 aa5.42□□□□□ -1.54
TRAPPC13-204ENST00000438419 PRR5P85299 388 aa5.42□□□□□ -1.54
TRAPPC13-204ENST00000438419 KCNT2Q6UVM3 1135 aa5.42□□□□□ -1.54
TRAPPC13-204ENST00000438419 TMC6Q7Z403 805 aa5.42□□□□□ -1.54
TRAPPC13-204ENST00000438419 APPBP2Q92624 585 aa5.42□□□□□ -1.54
TRAPPC13-204ENST00000438419 PTPRN2Q92932 1015 aa5.42□□□□□ -1.54
TRAPPC13-204ENST00000438419 SLC38A3Q99624 504 aa5.42□□□□□ -1.54
TRAPPC13-204ENST00000438419 PHF20Q9BVI0 1012 aa5.42□□□□□ -1.54
TRAPPC13-204ENST00000438419 MRPL4Q9BYD3 311 aaKnown RBP5.42□□□□□ -1.54
TRAPPC13-204ENST00000438419 KANSL2Q9H9L4 492 aa5.42□□□□□ -1.54
TRAPPC13-204ENST00000438419 CD320Q9NPF0 282 aa5.42□□□□□ -1.54
TRAPPC13-204ENST00000438419 SIRT5Q9NXA8 310 aa5.42□□□□□ -1.54
TRAPPC13-204ENST00000438419 SIT1Q9Y3P8 196 aa5.42□□□□□ -1.54
TRAPPC13-204ENST00000438419 PCDHA2Q9Y5H9 948 aa5.42□□□□□ -1.54
TRAPPC13-204ENST00000438419 ENPP3O14638 875 aa5.41□□□□□ -1.54
TRAPPC13-204ENST00000438419 CDC45O75419 566 aa5.41□□□□□ -1.54
TRAPPC13-204ENST00000438419 TMEM253P0C7T8 217 aa5.41□□□□□ -1.54
TRAPPC13-204ENST00000438419 FBLN1P23142 703 aa5.41□□□□□ -1.54
TRAPPC13-204ENST00000438419 WWC2Q6AWC2 1192 aa5.41□□□□□ -1.54
TRAPPC13-204ENST00000438419 TMEM132EQ6IEE7 984 aa5.41□□□□□ -1.54
TRAPPC13-204ENST00000438419 ZC3H14Q6PJT7 736 aaKnown RBP5.41□□□□□ -1.54
TRAPPC13-204ENST00000438419 ATG14Q6ZNE5 492 aa5.41□□□□□ -1.54
TRAPPC13-204ENST00000438419 CEP68Q76N32 757 aa5.41□□□□□ -1.54
TRAPPC13-204ENST00000438419 LDHDQ86WU2 507 aa5.41□□□□□ -1.54
TRAPPC13-204ENST00000438419 NETO2Q8NC67 525 aa5.41□□□□□ -1.54
TRAPPC13-204ENST00000438419 USP33Q8TEY7 942 aa5.41□□□□□ -1.54
TRAPPC13-204ENST00000438419 PPP1R16BQ96T49 567 aa5.41□□□□□ -1.54
TRAPPC13-204ENST00000438419 X6R8D5 127 aa5.41□□□□□ -1.54
TRAPPC13-204ENST00000438419 ASXL2Q76L83 1435 aa5.41□□□□□ -1.54
TRAPPC13-204ENST00000438419 IRS2Q9Y4H2 1338 aa5.41□□□□□ -1.54
TRAPPC13-204ENST00000438419 AQP7O14520 342 aa5.4□□□□□ -1.54
TRAPPC13-204ENST00000438419 EFCAB14O75071 495 aa5.4□□□□□ -1.54
TRAPPC13-204ENST00000438419 APPP05067 770 aa5.4□□□□□ -1.54
TRAPPC13-204ENST00000438419 C6orf222P0C671 652 aaPredicted RBP5.4□□□□□ -1.54
TRAPPC13-204ENST00000438419 NAT1P18440 290 aa5.4□□□□□ -1.54
TRAPPC13-204ENST00000438419 GPR85P60893 370 aa5.4□□□□□ -1.54
TRAPPC13-204ENST00000438419 TMEM62Q0P6H9 643 aa5.4□□□□□ -1.54
TRAPPC13-204ENST00000438419 LSAMPQ13449 338 aa5.4□□□□□ -1.54
TRAPPC13-204ENST00000438419 TRIM61Q5EBN2 209 aa5.4□□□□□ -1.54
TRAPPC13-204ENST00000438419 CABP7Q86V35 215 aa5.4□□□□□ -1.54
TRAPPC13-204ENST00000438419 IGDCC3Q8IVU1 814 aa5.4□□□□□ -1.54
TRAPPC13-204ENST00000438419 IFNL3Q8IZI9 196 aa5.4□□□□□ -1.54
TRAPPC13-204ENST00000438419 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.4□□□□□ -1.54
TRAPPC13-204ENST00000438419 BCAS3Q9H6U6 928 aa5.4□□□□□ -1.54
TRAPPC13-204ENST00000438419 NCOA5Q9HCD5 579 aaKnown RBP5.4□□□□□ -1.54
TRAPPC13-204ENST00000438419 FANCLQ9NW38 375 aa5.4□□□□□ -1.54
TRAPPC13-204ENST00000438419 SFMBT1Q9UHJ3 866 aa5.4□□□□□ -1.54
TRAPPC13-204ENST00000438419 SMG5Q9UPR3 1016 aaKnown RBP5.4□□□□□ -1.54
TRAPPC13-204ENST00000438419 PCDHA5Q9Y5H7 936 aa5.4□□□□□ -1.54
TRAPPC13-204ENST00000438419 NFIBO00712 420 aa5.4□□□□□ -1.55
TRAPPC13-204ENST00000438419 PLD2O14939 933 aa5.4□□□□□ -1.55
TRAPPC13-204ENST00000438419 N4BP3O15049 544 aa5.4□□□□□ -1.55
TRAPPC13-204ENST00000438419 RAP1GAPP47736 663 aa5.4□□□□□ -1.55
TRAPPC13-204ENST00000438419 NCKAP1LP55160 1127 aa5.4□□□□□ -1.55
TRAPPC13-204ENST00000438419 ZNF200P98182 395 aaPredicted RBP5.4□□□□□ -1.55
TRAPPC13-204ENST00000438419 TCEA2Q15560 299 aa5.4□□□□□ -1.55
TRAPPC13-204ENST00000438419 OLFML2BQ68BL8 750 aa5.4□□□□□ -1.55
TRAPPC13-204ENST00000438419 SDE2Q6IQ49 451 aa5.4□□□□□ -1.55
TRAPPC13-204ENST00000438419 C16orf86Q6ZW13 317 aa5.4□□□□□ -1.55
TRAPPC13-204ENST00000438419 RIOX2Q8IUF8 465 aa5.4□□□□□ -1.55
TRAPPC13-204ENST00000438419 NLGN1Q8N2Q7 840 aa5.4□□□□□ -1.55
TRAPPC13-204ENST00000438419 MZB1Q8WU39 189 aa5.4□□□□□ -1.55
TRAPPC13-204ENST00000438419 TSPAN17Q96FV3 270 aa5.4□□□□□ -1.55
TRAPPC13-204ENST00000438419 TRMT2BQ96GJ1 504 aaKnown RBP5.4□□□□□ -1.55
TRAPPC13-204ENST00000438419 TMEM169Q96HH4 297 aa5.4□□□□□ -1.55
TRAPPC13-204ENST00000438419 PPARGC1AQ9UBK2 798 aaKnown RBP5.4□□□□□ -1.55
TRAPPC13-204ENST00000438419 H7BY64 318 aa5.39□□□□□ -1.55
TRAPPC13-204ENST00000438419 IRS4O14654 1257 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC13-204ENST00000438419 SGSM2O43147 1006 aa5.39□□□□□ -1.55
TRAPPC13-204ENST00000438419 ASMTLO95671 621 aa5.39□□□□□ -1.55
TRAPPC13-204ENST00000438419 KIZQ2M2Z5 673 aa5.39□□□□□ -1.55
TRAPPC13-204ENST00000438419 FNDC3BQ53EP0 1204 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 518.7 ms