RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 MYH8P13535 1937 aa11.59□□□□□ -0.55
CD44-210ENST00000434472 EDIL3O43854 480 aa11.59□□□□□ -0.55
CD44-210ENST00000434472 USO1O60763 962 aaKnown RBP11.59□□□□□ -0.55
CD44-210ENST00000434472 NPM3O75607 178 aaKnown RBP11.59□□□□□ -0.55
CD44-210ENST00000434472 USP11P51784 963 aa11.59□□□□□ -0.55
CD44-210ENST00000434472 EIF6P56537 245 aaKnown RBP11.59□□□□□ -0.55
CD44-210ENST00000434472 HDLBPQ00341 1268 aaKnown RBP11.59□□□□□ -0.55
CD44-210ENST00000434472 SPA17Q15506 151 aa11.59□□□□□ -0.55
CD44-210ENST00000434472 UBE2SQ16763 222 aa11.59□□□□□ -0.55
CD44-210ENST00000434472 LONRF2Q1L5Z9 754 aa11.59□□□□□ -0.55
CD44-210ENST00000434472 HDXQ7Z353 690 aa11.59□□□□□ -0.55
CD44-210ENST00000434472 TRAPPC11Q7Z392 1133 aa11.59□□□□□ -0.55
CD44-210ENST00000434472 PODNQ7Z5L7 613 aa11.59□□□□□ -0.55
CD44-210ENST00000434472 CCDC65Q8IXS2 484 aa11.59□□□□□ -0.55
CD44-210ENST00000434472 MYOCDQ8IZQ8 938 aa11.59□□□□□ -0.55
CD44-210ENST00000434472 DDX12PQ92771 950 aa11.59□□□□□ -0.55
CD44-210ENST00000434472 CCDC42Q96M95 316 aa11.59□□□□□ -0.55
CD44-210ENST00000434472 ANKZF1Q9H8Y5 726 aa11.59□□□□□ -0.55
CD44-210ENST00000434472 ATF5Q9Y2D1 282 aaPredicted RBP11.59□□□□□ -0.55
CD44-210ENST00000434472 RASSF10A6NK89 507 aa11.58□□□□□ -0.56
CD44-210ENST00000434472 PPP1R11O60927 126 aaPredicted RBP11.58□□□□□ -0.56
CD44-210ENST00000434472 EIF3JO75822 258 aaKnown RBP11.58□□□□□ -0.56
CD44-210ENST00000434472 GNA14O95837 355 aa11.58□□□□□ -0.56
CD44-210ENST00000434472 IDEP14735 1019 aa11.58□□□□□ -0.56
CD44-210ENST00000434472 CRKP46108 304 aa11.58□□□□□ -0.56
CD44-210ENST00000434472 VAV2P52735 878 aa11.58□□□□□ -0.56
CD44-210ENST00000434472 EHHADHQ08426 723 aa11.58□□□□□ -0.56
CD44-210ENST00000434472 KIF5AQ12840 1032 aa11.58□□□□□ -0.56
CD44-210ENST00000434472 AP3B2Q13367 1082 aa11.58□□□□□ -0.56
CD44-210ENST00000434472 IQCEQ6IPM2 695 aa11.58□□□□□ -0.56
CD44-210ENST00000434472 DYMQ7RTS9 669 aa11.58□□□□□ -0.56
CD44-210ENST00000434472 SLFN12Q8IYM2 578 aa11.58□□□□□ -0.56
CD44-210ENST00000434472 FLAD1Q8NFF5 587 aa11.58□□□□□ -0.56
CD44-210ENST00000434472 MASTLQ96GX5 879 aa11.58□□□□□ -0.56
CD44-210ENST00000434472 CEP63Q96MT8 703 aa11.58□□□□□ -0.56
CD44-210ENST00000434472 ZDHHC15Q96MV8 337 aa11.58□□□□□ -0.56
CD44-210ENST00000434472 FUT8Q9BYC5 575 aa11.58□□□□□ -0.56
CD44-210ENST00000434472 NUCKS1Q9H1E3 243 aaKnown RBP11.58□□□□□ -0.56
CD44-210ENST00000434472 EPC1Q9H2F5 836 aa11.58□□□□□ -0.56
CD44-210ENST00000434472 ZSWIM4Q9H7M6 989 aa11.58□□□□□ -0.56
CD44-210ENST00000434472 KANSL2Q9H9L4 492 aa11.58□□□□□ -0.56
CD44-210ENST00000434472 AGPAT5Q9NUQ2 364 aa11.58□□□□□ -0.56
CD44-210ENST00000434472 PCDHA12Q9UN75 941 aa11.58□□□□□ -0.56
CD44-210ENST00000434472 SIK3Q9Y2K2 1263 aa11.58□□□□□ -0.56
CD44-210ENST00000434472 SAR1BQ9Y6B6 198 aa11.58□□□□□ -0.56
CD44-210ENST00000434472 GREB1LQ9C091 1923 aaPredicted RBP11.58□□□□□ -0.56
CD44-210ENST00000434472 CYP3A7-CYP3A51PA0A087WV96 503 aa11.57□□□□□ -0.56
CD44-210ENST00000434472 POTEMA6NI47 508 aa11.57□□□□□ -0.56
CD44-210ENST00000434472 USP17L10C9JJH3 530 aa11.57□□□□□ -0.56
CD44-210ENST00000434472 MAP2K7O14733 419 aa11.57□□□□□ -0.56
CD44-210ENST00000434472 CYP3A7P24462 503 aa11.57□□□□□ -0.56
CD44-210ENST00000434472 SCNN1DP51172 638 aa11.57□□□□□ -0.56
CD44-210ENST00000434472 ATP2B2Q01814 1243 aa11.57□□□□□ -0.56
CD44-210ENST00000434472 SMC1AQ14683 1233 aaKnown RBP11.57□□□□□ -0.56
CD44-210ENST00000434472 DOK7Q18PE1 504 aa11.57□□□□□ -0.56
CD44-210ENST00000434472 TTBK2Q6IQ55 1244 aa11.57□□□□□ -0.56
CD44-210ENST00000434472 APOBEC3HQ6NTF7 200 aaKnown RBP11.57□□□□□ -0.56
CD44-210ENST00000434472 HAS1Q92839 578 aa11.57□□□□□ -0.56
CD44-210ENST00000434472 PURBQ96QR8 312 aaKnown RBP11.57□□□□□ -0.56
CD44-210ENST00000434472 TRIM34Q9BYJ4 488 aa11.57□□□□□ -0.56
CD44-210ENST00000434472 ACBD3Q9H3P7 528 aa11.57□□□□□ -0.56
CD44-210ENST00000434472 PANK4Q9NVE7 773 aa11.57□□□□□ -0.56
CD44-210ENST00000434472 PLAGL2Q9UPG8 496 aa11.57□□□□□ -0.56
CD44-210ENST00000434472 NRXN2Q9P2S2 1712 aa11.57□□□□□ -0.56
CD44-210ENST00000434472 TBX3O15119 743 aa11.57□□□□□ -0.56
CD44-210ENST00000434472 TACC1O75410 805 aa11.57□□□□□ -0.56
CD44-210ENST00000434472 LCA5LO95447 670 aa11.57□□□□□ -0.56
CD44-210ENST00000434472 ABL1P00519 1130 aa11.57□□□□□ -0.56
CD44-210ENST00000434472 FKBP3Q00688 224 aaKnown RBP11.57□□□□□ -0.56
CD44-210ENST00000434472 COASYQ13057 564 aa11.57□□□□□ -0.56
CD44-210ENST00000434472 FAM26FQ5R3K3 315 aa11.57□□□□□ -0.56
CD44-210ENST00000434472 TAF3Q5VWG9 929 aa11.57□□□□□ -0.56
CD44-210ENST00000434472 WDR93Q6P2C0 686 aa11.57□□□□□ -0.56
CD44-210ENST00000434472 KRT27Q7Z3Y8 459 aa11.57□□□□□ -0.56
CD44-210ENST00000434472 TEX2Q8IWB9 1127 aa11.57□□□□□ -0.56
CD44-210ENST00000434472 NEK11Q8NG66 645 aa11.57□□□□□ -0.56
CD44-210ENST00000434472 SECISBP2LQ93073 1101 aaKnown RBP11.57□□□□□ -0.56
CD44-210ENST00000434472 DNAJC19Q96DA6 116 aa11.57□□□□□ -0.56
CD44-210ENST00000434472 MBOAT7Q96N66 472 aa11.57□□□□□ -0.56
CD44-210ENST00000434472 IDI2Q9BXS1 227 aa11.57□□□□□ -0.56
CD44-210ENST00000434472 PI4KBQ9UBF8 816 aa11.57□□□□□ -0.56
CD44-210ENST00000434472 CCDC66A2RUB6 948 aa11.56□□□□□ -0.56
CD44-210ENST00000434472 SASH3O75995 380 aa11.56□□□□□ -0.56
CD44-210ENST00000434472 FOSP01100 380 aaPredicted RBP11.56□□□□□ -0.56
CD44-210ENST00000434472 OAS2P29728 719 aaKnown RBP11.56□□□□□ -0.56
CD44-210ENST00000434472 SLC16A2P36021 539 aa11.56□□□□□ -0.56
CD44-210ENST00000434472 SLC1A4P43007 532 aa11.56□□□□□ -0.56
CD44-210ENST00000434472 KLK7P49862 253 aa11.56□□□□□ -0.56
CD44-210ENST00000434472 TRAF1Q13077 416 aa11.56□□□□□ -0.56
CD44-210ENST00000434472 QRICH1Q2TAL8 776 aa11.56□□□□□ -0.56
CD44-210ENST00000434472 MAP9Q49MG5 647 aa11.56□□□□□ -0.56
CD44-210ENST00000434472 CERKLQ49MI3 558 aaPredicted RBP11.56□□□□□ -0.56
CD44-210ENST00000434472 CCDC40Q4G0X9 1142 aa11.56□□□□□ -0.56
CD44-210ENST00000434472 BEND6Q5SZJ8 279 aaPredicted RBP11.56□□□□□ -0.56
CD44-210ENST00000434472 STRIP1Q5VSL9 837 aa11.56□□□□□ -0.56
CD44-210ENST00000434472 HAUS3Q68CZ6 603 aa11.56□□□□□ -0.56
CD44-210ENST00000434472 SLFN13Q68D06 897 aa11.56□□□□□ -0.56
CD44-210ENST00000434472 PPP4R3CPQ6ZMV5 832 aa11.56□□□□□ -0.56
CD44-210ENST00000434472 LRRC55Q6ZSA7 311 aa11.56□□□□□ -0.56
CD44-210ENST00000434472 KCTD1Q719H9 257 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms