RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 FAM47CQ5HY64 1035 aa20.3■□□□□ 0.84
NUP50-208ENST00000430547 FANCBQ8NB91 859 aa20.3■□□□□ 0.84
NUP50-208ENST00000430547 SMARCC2Q8TAQ2 1214 aa20.3■□□□□ 0.84
NUP50-208ENST00000430547 RNPC3Q96LT9 517 aaKnown RBP20.3■□□□□ 0.84
NUP50-208ENST00000430547 B4GALT4O60513 344 aa20.29■□□□□ 0.84
NUP50-208ENST00000430547 REC8O95072 547 aa20.29■□□□□ 0.84
NUP50-208ENST00000430547 ADCK5Q3MIX3 580 aa20.29■□□□□ 0.84
NUP50-208ENST00000430547 KCNV1Q6PIU1 500 aa20.29■□□□□ 0.84
NUP50-208ENST00000430547 RASEFQ8IZ41 740 aa20.29■□□□□ 0.84
NUP50-208ENST00000430547 CMTR1Q8N1G2 835 aaKnown RBP20.29■□□□□ 0.84
NUP50-208ENST00000430547 CCDC82Q8N4S0 544 aa20.29■□□□□ 0.84
NUP50-208ENST00000430547 SRBD1Q8N5C6 995 aaKnown RBP20.29■□□□□ 0.84
NUP50-208ENST00000430547 AFG1LQ8WV93 481 aa20.29■□□□□ 0.84
NUP50-208ENST00000430547 TCEANC2Q96MN5 208 aa20.29■□□□□ 0.84
NUP50-208ENST00000430547 ALDH8A1Q9H2A2 487 aaPredicted RBP20.29■□□□□ 0.84
NUP50-208ENST00000430547 HIPK3Q9H422 1215 aa20.29■□□□□ 0.84
NUP50-208ENST00000430547 MMP3P08254 477 aa20.28■□□□□ 0.84
NUP50-208ENST00000430547 SUPT20HL2P0C7V6 817 aa20.28■□□□□ 0.84
NUP50-208ENST00000430547 CHMP4BP1P59074 171 aa20.28■□□□□ 0.84
NUP50-208ENST00000430547 ARHGAP1Q07960 439 aa20.28■□□□□ 0.84
NUP50-208ENST00000430547 APOA5Q6Q788 366 aa20.28■□□□□ 0.84
NUP50-208ENST00000430547 DEFB123Q8N688 67 aa20.28■□□□□ 0.84
NUP50-208ENST00000430547 TRPV6Q9H1D0 765 aa20.28■□□□□ 0.84
NUP50-208ENST00000430547 RBM28Q9NW13 759 aaKnown RBP20.28■□□□□ 0.84
NUP50-208ENST00000430547 DDX41Q9UJV9 622 aaKnown RBP20.28■□□□□ 0.84
NUP50-208ENST00000430547 ZBTB43O43298 467 aa20.27■□□□□ 0.84
NUP50-208ENST00000430547 CYP2C18P33260 490 aa20.27■□□□□ 0.84
NUP50-208ENST00000430547 EXOSC10Q01780 885 aaKnown RBP20.27■□□□□ 0.84
NUP50-208ENST00000430547 LAMC2Q13753 1193 aa20.27■□□□□ 0.84
NUP50-208ENST00000430547 NBPF20Q3BBV1 942 aa20.27■□□□□ 0.84
NUP50-208ENST00000430547 TMTC3Q6ZXV5 915 aa20.27■□□□□ 0.84
NUP50-208ENST00000430547 VSIG10LQ86VR7 867 aa20.27■□□□□ 0.84
NUP50-208ENST00000430547 DHX37Q8IY37 1157 aaKnown RBP20.27■□□□□ 0.84
NUP50-208ENST00000430547 IL31RAQ8NI17 732 aa20.27■□□□□ 0.84
NUP50-208ENST00000430547 NAP1L2Q9ULW6 460 aaPredicted RBP20.27■□□□□ 0.84
NUP50-208ENST00000430547 LAMA2P24043 3122 aaKnown RBP20.26■□□□□ 0.83
NUP50-208ENST00000430547 CSF2RAP15509 400 aa20.26■□□□□ 0.83
NUP50-208ENST00000430547 CASTP20810 708 aaKnown RBP20.26■□□□□ 0.83
NUP50-208ENST00000430547 EPHB4P54760 987 aa20.26■□□□□ 0.83
NUP50-208ENST00000430547 DGKDQ16760 1214 aa20.26■□□□□ 0.83
NUP50-208ENST00000430547 RTN1Q16799 776 aa20.26■□□□□ 0.83
NUP50-208ENST00000430547 GNPTABQ3T906 1256 aa20.26■□□□□ 0.83
NUP50-208ENST00000430547 NFRKBQ6P4R8 1299 aa20.26■□□□□ 0.83
NUP50-208ENST00000430547 NOD1Q9Y239 953 aa20.26■□□□□ 0.83
NUP50-208ENST00000430547 DOCK5Q9H7D0 1870 aa20.26■□□□□ 0.83
NUP50-208ENST00000430547 KLF18A0A0U1RQI7 1052 aa20.25■□□□□ 0.83
NUP50-208ENST00000430547 STAM2O75886 525 aa20.25■□□□□ 0.83
NUP50-208ENST00000430547 TGFB3P10600 412 aa20.25■□□□□ 0.83
NUP50-208ENST00000430547 HSPA4P34932 840 aa20.25■□□□□ 0.83
NUP50-208ENST00000430547 PSRC1Q6PGN9 363 aaPredicted RBP20.25■□□□□ 0.83
NUP50-208ENST00000430547 USP17L6PQ6QN14 398 aa20.25■□□□□ 0.83
NUP50-208ENST00000430547 Q7L0L9 218 aa20.25■□□□□ 0.83
NUP50-208ENST00000430547 EMID1Q96A84 441 aaPredicted RBP20.25■□□□□ 0.83
NUP50-208ENST00000430547 JAKMIP1Q96N16 626 aaKnown RBP20.25■□□□□ 0.83
NUP50-208ENST00000430547 TRMT13Q9NUP7 481 aaKnown RBP20.25■□□□□ 0.83
NUP50-208ENST00000430547 FRMPD4Q14CM0 1322 aa20.25■□□□□ 0.83
NUP50-208ENST00000430547 hCG_1642624A0A1W2PR95 340 aa20.24■□□□□ 0.83
NUP50-208ENST00000430547 GOLGA8AA7E2F4 631 aa20.24■□□□□ 0.83
NUP50-208ENST00000430547 GOLGA8BA8MQT2 603 aa20.24■□□□□ 0.83
NUP50-208ENST00000430547 PIK3CDO00329 1044 aa20.24■□□□□ 0.83
NUP50-208ENST00000430547 RGS20O76081 388 aa20.24■□□□□ 0.83
NUP50-208ENST00000430547 PTPN11Q06124 597 aaPredicted RBP20.24■□□□□ 0.83
NUP50-208ENST00000430547 BLOC1S2Q6QNY1 142 aa20.24■□□□□ 0.83
NUP50-208ENST00000430547 HEATR3Q7Z4Q2 680 aa20.24■□□□□ 0.83
NUP50-208ENST00000430547 PPTC7Q8NI37 304 aa20.24■□□□□ 0.83
NUP50-208ENST00000430547 ZFP91Q96JP5 570 aaPredicted RBP20.24■□□□□ 0.83
NUP50-208ENST00000430547 NOC4LQ9BVI4 516 aaKnown RBP20.24■□□□□ 0.83
NUP50-208ENST00000430547 KATNAL1Q9BW62 490 aa20.24■□□□□ 0.83
NUP50-208ENST00000430547 PSTPIP2Q9H939 334 aa20.24■□□□□ 0.83
NUP50-208ENST00000430547 PPP4R2Q9NY27 417 aa20.24■□□□□ 0.83
NUP50-208ENST00000430547 BRPF3Q9ULD4 1205 aa20.24■□□□□ 0.83
NUP50-208ENST00000430547 GGPS1O95749 300 aa20.23■□□□□ 0.83
NUP50-208ENST00000430547 CENPBP07199 599 aaPredicted RBP20.23■□□□□ 0.83
NUP50-208ENST00000430547 CCL23P55773 120 aa20.23■□□□□ 0.83
NUP50-208ENST00000430547 ZNF697Q5TEC3 545 aa20.23■□□□□ 0.83
NUP50-208ENST00000430547 SPATA33Q96N06 139 aa20.23■□□□□ 0.83
NUP50-208ENST00000430547 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.23■□□□□ 0.837e-6■□□□□ 9.4
NUP50-208ENST00000430547 TANC1Q9C0D5 1861 aa20.23■□□□□ 0.83
NUP50-208ENST00000430547 MLXIPQ9HAP2 919 aa20.23■□□□□ 0.83
NUP50-208ENST00000430547 IL23AQ9NPF7 189 aa20.23■□□□□ 0.83
NUP50-208ENST00000430547 SNX14Q9Y5W7 946 aa20.23■□□□□ 0.83
NUP50-208ENST00000430547 UMODL1Q5DID0 1318 aa20.23■□□□□ 0.83
NUP50-208ENST00000430547 CNTNAP5Q8WYK1 1306 aa20.23■□□□□ 0.83
NUP50-208ENST00000430547 SPDYE3A6NKU9 549 aa20.22■□□□□ 0.83
NUP50-208ENST00000430547 MEIS2O14770 477 aa20.22■□□□□ 0.83
NUP50-208ENST00000430547 SORBS3O60504 671 aa20.22■□□□□ 0.83
NUP50-208ENST00000430547 ACRP10323 421 aa20.22■□□□□ 0.83
NUP50-208ENST00000430547 CYP2C9P11712 490 aa20.22■□□□□ 0.83
NUP50-208ENST00000430547 UBA1P22314 1058 aaKnown RBP20.22■□□□□ 0.83
NUP50-208ENST00000430547 PSMA5P28066 241 aa20.22■□□□□ 0.83
NUP50-208ENST00000430547 SMAD3P84022 425 aaKnown RBP20.22■□□□□ 0.83
NUP50-208ENST00000430547 CELF3Q5SZQ8 465 aaKnown RBP20.22■□□□□ 0.83
NUP50-208ENST00000430547 MYSM1Q5VVJ2 828 aa20.22■□□□□ 0.83
NUP50-208ENST00000430547 ERICH6BQ5W0A0 696 aa20.22■□□□□ 0.83
NUP50-208ENST00000430547 XRRA1Q6P2D8 792 aa20.22■□□□□ 0.83
NUP50-208ENST00000430547 PPP1R13LQ8WUF5 828 aa20.22■□□□□ 0.83
NUP50-208ENST00000430547 GPKOWQ92917 476 aaPredicted RBP eCLIP20.22■□□□□ 0.83
NUP50-208ENST00000430547 KCNB2Q92953 911 aa20.22■□□□□ 0.83
NUP50-208ENST00000430547 MTIF3Q9H2K0 278 aaKnown RBP20.22■□□□□ 0.83
NUP50-208ENST00000430547 TRIP12Q14669 1992 aaPredicted RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms