RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 PANX2Q96RD6 677 aa17.62■□□□□ 0.41
TVP23C-203ENST00000428082 SLF1Q9BQI6 1058 aa17.62■□□□□ 0.41
TVP23C-203ENST00000428082 PPP2R2CQ9Y2T4 447 aa17.62■□□□□ 0.41
TVP23C-203ENST00000428082 VWA3AA6NCI4 1184 aa17.61■□□□□ 0.41
TVP23C-203ENST00000428082 AFMP43652 599 aa17.61■□□□□ 0.41
TVP23C-203ENST00000428082 SPAG1Q07617 926 aa17.61■□□□□ 0.41
TVP23C-203ENST00000428082 MOGSQ13724 837 aa17.61■□□□□ 0.41
TVP23C-203ENST00000428082 TYW1BQ6NUM6 668 aa17.61■□□□□ 0.41
TVP23C-203ENST00000428082 PPFIBP1Q86W92 1011 aa17.61■□□□□ 0.41
TVP23C-203ENST00000428082 TMEM139Q8IV31 216 aa17.61■□□□□ 0.41
TVP23C-203ENST00000428082 REXO1L1PQ8IX06 675 aa17.61■□□□□ 0.41
TVP23C-203ENST00000428082 PROCA1Q8NCQ7 364 aaPredicted RBP17.61■□□□□ 0.41
TVP23C-203ENST00000428082 CCDC148Q8NFR7 591 aa17.61■□□□□ 0.41
TVP23C-203ENST00000428082 DNAI1Q9UI46 699 aa17.61■□□□□ 0.41
TVP23C-203ENST00000428082 AKR1B15C9JRZ8 316 aaPredicted RBP17.6■□□□□ 0.41
TVP23C-203ENST00000428082 GTPBP6O43824 516 aaPredicted RBP17.6■□□□□ 0.41
TVP23C-203ENST00000428082 CUL4BQ13620 913 aa17.6■□□□□ 0.41
TVP23C-203ENST00000428082 CATSPERGQ6ZRH7 1159 aa17.6■□□□□ 0.41
TVP23C-203ENST00000428082 PIK3AP1Q6ZUJ8 805 aa17.6■□□□□ 0.41
TVP23C-203ENST00000428082 TRMT44Q8IYL2 757 aaKnown RBP17.6■□□□□ 0.41
TVP23C-203ENST00000428082 BLIDQ8IZY5 108 aa17.6■□□□□ 0.41
TVP23C-203ENST00000428082 PRPF38AQ8NAV1 312 aaKnown RBP17.6■□□□□ 0.41
TVP23C-203ENST00000428082 ANKRD20A12PQ8NF67 263 aa17.6■□□□□ 0.41
TVP23C-203ENST00000428082 BARHL2Q9NY43 387 aa17.6■□□□□ 0.41
TVP23C-203ENST00000428082 SMCHD1A6NHR9 2005 aa17.6■□□□□ 0.41
TVP23C-203ENST00000428082 STXBP3O00186 592 aa17.6■□□□□ 0.41
TVP23C-203ENST00000428082 CBX1P83916 185 aa17.6■□□□□ 0.41
TVP23C-203ENST00000428082 FSTL1Q12841 308 aa17.6■□□□□ 0.41
TVP23C-203ENST00000428082 SNAPC2Q13487 334 aa17.6■□□□□ 0.41
TVP23C-203ENST00000428082 CDKAL1Q5VV42 579 aa17.6■□□□□ 0.41
TVP23C-203ENST00000428082 SPRYD7Q5W111 196 aa17.6■□□□□ 0.41
TVP23C-203ENST00000428082 TC2NQ8N9U0 490 aa17.6■□□□□ 0.41
TVP23C-203ENST00000428082 COA7Q96BR5 231 aa17.6■□□□□ 0.41
TVP23C-203ENST00000428082 CCDC51Q96ER9 411 aa17.6■□□□□ 0.41
TVP23C-203ENST00000428082 SAMSN1Q9NSI8 373 aaKnown RBP17.6■□□□□ 0.41
TVP23C-203ENST00000428082 DDX41Q9UJV9 622 aaKnown RBP17.6■□□□□ 0.41
TVP23C-203ENST00000428082 PPP1R9AQ9ULJ8 1098 aa17.6■□□□□ 0.41
TVP23C-203ENST00000428082 PCDHA4Q9UN74 947 aa17.6■□□□□ 0.41
TVP23C-203ENST00000428082 TLL2Q9Y6L7 1015 aa17.6■□□□□ 0.41
TVP23C-203ENST00000428082 A0A087X0B3 334 aa17.59■□□□□ 0.41
TVP23C-203ENST00000428082 USP17L15C9J2P7 530 aa17.59■□□□□ 0.41
TVP23C-203ENST00000428082 USP17L13C9JLJ4 530 aa17.59■□□□□ 0.41
TVP23C-203ENST00000428082 USP17L11C9JVI0 530 aa17.59■□□□□ 0.41
TVP23C-203ENST00000428082 USP17L18D6R9N7 530 aa17.59■□□□□ 0.41
TVP23C-203ENST00000428082 USP17L22D6RA61 530 aa17.59■□□□□ 0.41
TVP23C-203ENST00000428082 USP17L17D6RBQ6 530 aa17.59■□□□□ 0.41
TVP23C-203ENST00000428082 USP17L19D6RCP7 530 aa17.59■□□□□ 0.41
TVP23C-203ENST00000428082 USP17L20D6RJB6 530 aa17.59■□□□□ 0.41
TVP23C-203ENST00000428082 ZNF157P51786 506 aaPredicted RBP17.59■□□□□ 0.41
TVP23C-203ENST00000428082 USP17L24Q0WX57 530 aa17.59■□□□□ 0.41
TVP23C-203ENST00000428082 TRIM65Q6PJ69 517 aa17.59■□□□□ 0.41
TVP23C-203ENST00000428082 MS4A4AQ96JQ5 239 aa17.59■□□□□ 0.41
TVP23C-203ENST00000428082 RANBP17Q9H2T7 1088 aaKnown RBP17.59■□□□□ 0.41
TVP23C-203ENST00000428082 TMEM88BA6NKF7 163 aa17.59■□□□□ 0.41
TVP23C-203ENST00000428082 LAD1O00515 517 aa17.59■□□□□ 0.41
TVP23C-203ENST00000428082 MYL1P05976 194 aa17.59■□□□□ 0.41
TVP23C-203ENST00000428082 ZBTB48P10074 688 aaPredicted RBP17.59■□□□□ 0.41
TVP23C-203ENST00000428082 E2F4Q16254 413 aa17.59■□□□□ 0.41
TVP23C-203ENST00000428082 CCDC174Q6PII3 467 aa17.59■□□□□ 0.41
TVP23C-203ENST00000428082 DAGLBQ8NCG7 672 aa17.59■□□□□ 0.41
TVP23C-203ENST00000428082 ITIH6Q6UXX5 1313 aa17.58■□□□□ 0.41
TVP23C-203ENST00000428082 COL11A1P12107 1806 aaPredicted RBP17.58■□□□□ 0.41
TVP23C-203ENST00000428082 PPP1R3GB7ZBB8 358 aa17.58■□□□□ 0.4
TVP23C-203ENST00000428082 TAL1P17542 331 aaPredicted RBP17.58■□□□□ 0.4
TVP23C-203ENST00000428082 CASQ1P31415 396 aa17.58■□□□□ 0.4
TVP23C-203ENST00000428082 NAPAP54920 295 aa17.58■□□□□ 0.4
TVP23C-203ENST00000428082 COG2Q14746 738 aa17.58■□□□□ 0.4
TVP23C-203ENST00000428082 ELF2Q15723 593 aa17.58■□□□□ 0.4
TVP23C-203ENST00000428082 RGMBQ6NW40 437 aa17.58■□□□□ 0.4
TVP23C-203ENST00000428082 FASTKD5Q7L8L6 764 aaKnown RBP17.58■□□□□ 0.4
TVP23C-203ENST00000428082 RASAL3Q86YV0 1011 aa17.58■□□□□ 0.4
TVP23C-203ENST00000428082 MNS1Q8NEH6 495 aa17.58■□□□□ 0.4
TVP23C-203ENST00000428082 ATG4CQ96DT6 458 aa17.58■□□□□ 0.4
TVP23C-203ENST00000428082 GTPBP4Q9BZE4 634 aaKnown RBP17.58■□□□□ 0.4
TVP23C-203ENST00000428082 RWDD2AQ9UIY3 292 aa17.58■□□□□ 0.4
TVP23C-203ENST00000428082 AGTPBP1Q9UPW5 1226 aa17.58■□□□□ 0.4
TVP23C-203ENST00000428082 hCG_1984214I3L0E3 225 aa17.57■□□□□ 0.4
TVP23C-203ENST00000428082 HOXA7P31268 230 aaPredicted RBP17.57■□□□□ 0.4
TVP23C-203ENST00000428082 DSG3P32926 999 aa17.57■□□□□ 0.4
TVP23C-203ENST00000428082 MCM7P33993 719 aa17.57■□□□□ 0.4
TVP23C-203ENST00000428082 GTF2A2P52657 109 aa17.57■□□□□ 0.4
TVP23C-203ENST00000428082 NAA30Q147X3 362 aaPredicted RBP17.57■□□□□ 0.4
TVP23C-203ENST00000428082 UTP14CQ5TAP6 766 aaKnown RBP17.57■□□□□ 0.4
TVP23C-203ENST00000428082 GPAT2Q6NUI2 795 aa17.57■□□□□ 0.4
TVP23C-203ENST00000428082 FBXO11Q86XK2 927 aa17.57■□□□□ 0.4
TVP23C-203ENST00000428082 CNGA4Q8IV77 575 aa17.57■□□□□ 0.4
TVP23C-203ENST00000428082 ZNF713Q8N859 430 aaPredicted RBP17.57■□□□□ 0.4
TVP23C-203ENST00000428082 MED15Q96RN5 788 aa17.57■□□□□ 0.4
TVP23C-203ENST00000428082 ARGLU1Q9NWB6 273 aaPredicted RBP17.57■□□□□ 0.4
TVP23C-203ENST00000428082 ADD3Q9UEY8 706 aaKnown RBP17.57■□□□□ 0.4
TVP23C-203ENST00000428082 ABT1Q9ULW3 272 aaKnown RBP17.57■□□□□ 0.4
TVP23C-203ENST00000428082 CCDC194A0A1B0GVG4 234 aa17.57■□□□□ 0.4
TVP23C-203ENST00000428082 ADAMTS3O15072 1205 aa17.57■□□□□ 0.4
TVP23C-203ENST00000428082 CCDC175P0C221 793 aa17.57■□□□□ 0.4
TVP23C-203ENST00000428082 TRIM14Q14142 442 aa17.57■□□□□ 0.4
TVP23C-203ENST00000428082 USH1GQ495M9 461 aa17.57■□□□□ 0.4
TVP23C-203ENST00000428082 HSP90AA4PQ58FG1 418 aa17.57■□□□□ 0.4
TVP23C-203ENST00000428082 KLHL10Q6JEL2 608 aa17.57■□□□□ 0.4
TVP23C-203ENST00000428082 PDXDC2PQ6P474 469 aa17.57■□□□□ 0.4
TVP23C-203ENST00000428082 IGSF22Q8N9C0 903 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms