RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 ACVR2BQ13705 512 aa27.44■■□□□ 1.98
APOE-202ENST00000425718 PIK3AP1Q6ZUJ8 805 aa27.44■■□□□ 1.98
APOE-202ENST00000425718 NIPA1Q7RTP0 329 aa27.44■■□□□ 1.98
APOE-202ENST00000425718 BRAPQ7Z569 592 aa27.44■■□□□ 1.98
APOE-202ENST00000425718 OXER1Q8TDS5 423 aa27.44■■□□□ 1.98
APOE-202ENST00000425718 TBCKQ8TEA7 893 aa27.44■■□□□ 1.98
APOE-202ENST00000425718 TNFRSF25Q93038 417 aa27.44■■□□□ 1.98
APOE-202ENST00000425718 SNAI1O95863 264 aaPredicted RBP27.43■■□□□ 1.98
APOE-202ENST00000425718 INHAP05111 366 aa27.43■■□□□ 1.98
APOE-202ENST00000425718 GCFC2P16383 781 aaKnown RBP27.43■■□□□ 1.98
APOE-202ENST00000425718 CYP2C19P33261 490 aa27.43■■□□□ 1.98
APOE-202ENST00000425718 TRAPPC10P48553 1259 aa27.43■■□□□ 1.98
APOE-202ENST00000425718 SETQ01105 290 aaPredicted RBP27.43■■□□□ 1.98
APOE-202ENST00000425718 NR5A1Q13285 461 aa27.43■■□□□ 1.98
APOE-202ENST00000425718 NEK8Q86SG6 692 aa27.43■■□□□ 1.98
APOE-202ENST00000425718 SPRYD3Q8NCJ5 442 aa27.43■■□□□ 1.98
APOE-202ENST00000425718 SCFD2Q8WU76 684 aa27.43■■□□□ 1.98
APOE-202ENST00000425718 MSCO60682 206 aa27.42■■□□□ 1.98
APOE-202ENST00000425718 TGFB3P10600 412 aa27.42■■□□□ 1.98
APOE-202ENST00000425718 PRKAR2AP13861 404 aaKnown RBP27.42■■□□□ 1.98
APOE-202ENST00000425718 CIITAP33076 1130 aa27.42■■□□□ 1.98
APOE-202ENST00000425718 MAP3K21Q5TCX8 1036 aa27.42■■□□□ 1.98
APOE-202ENST00000425718 CRYGNQ8WXF5 182 aa27.42■■□□□ 1.98
APOE-202ENST00000425718 GPRASP2Q96D09 838 aa27.42■■□□□ 1.98
APOE-202ENST00000425718 PGBD1Q96JS3 809 aa27.42■■□□□ 1.98
APOE-202ENST00000425718 ZSCAN16Q9H4T2 348 aaPredicted RBP27.42■■□□□ 1.98
APOE-202ENST00000425718 HMX1Q9NP08 348 aaPredicted RBP27.42■■□□□ 1.98
APOE-202ENST00000425718 ZHX1Q9UKY1 873 aaPredicted RBP27.42■■□□□ 1.98
APOE-202ENST00000425718 CYBAP13498 195 aa27.41■■□□□ 1.98
APOE-202ENST00000425718 CAPN2P17655 700 aa27.41■■□□□ 1.98
APOE-202ENST00000425718 CACNB2Q08289 660 aaPredicted RBP27.41■■□□□ 1.98
APOE-202ENST00000425718 ORC2Q13416 577 aaPredicted RBP27.41■■□□□ 1.98
APOE-202ENST00000425718 TTLL4Q14679 1199 aa27.41■■□□□ 1.98
APOE-202ENST00000425718 CEP55Q53EZ4 464 aa27.41■■□□□ 1.98
APOE-202ENST00000425718 IQSEC1Q6DN90 963 aa27.41■■□□□ 1.98
APOE-202ENST00000425718 ARMC5Q96C12 935 aa27.41■■□□□ 1.98
APOE-202ENST00000425718 INPP4AQ96PE3 977 aaPredicted RBP27.41■■□□□ 1.98
APOE-202ENST00000425718 FAM184BQ9ULE4 1060 aa27.41■■□□□ 1.98
APOE-202ENST00000425718 NKRFO15226 690 aaKnown RBP eCLIP27.4■■□□□ 1.98
APOE-202ENST00000425718 AKR1A1P14550 325 aa27.4■■□□□ 1.98
APOE-202ENST00000425718 INF2Q27J81 1249 aa27.4■■□□□ 1.98
APOE-202ENST00000425718 IL31RAQ8NI17 732 aa27.4■■□□□ 1.98
APOE-202ENST00000425718 MXRA8Q9BRK3 442 aa27.4■■□□□ 1.98
APOE-202ENST00000425718 MCOLN1Q9GZU1 580 aa27.4■■□□□ 1.98
APOE-202ENST00000425718 UBIAD1Q9Y5Z9 338 aa27.4■■□□□ 1.98
APOE-202ENST00000425718 RBM47A0AV96 593 aaKnown RBP27.39■■□□□ 1.98
APOE-202ENST00000425718 FIBPO43427 364 aa27.39■■□□□ 1.98
APOE-202ENST00000425718 ICAM3P32942 547 aa27.39■■□□□ 1.98
APOE-202ENST00000425718 MRPS9P82933 396 aaKnown RBP27.39■■□□□ 1.98
APOE-202ENST00000425718 RILPL1Q5EBL4 403 aa27.39■■□□□ 1.98
APOE-202ENST00000425718 FBXO16Q8IX29 292 aaPredicted RBP27.39■■□□□ 1.98
APOE-202ENST00000425718 JADE2Q9NQC1 790 aa27.39■■□□□ 1.98
APOE-202ENST00000425718 CYP3A7-CYP3A51PA0A087WV96 503 aa27.38■■□□□ 1.97
APOE-202ENST00000425718 ADAMTS3O15072 1205 aa27.38■■□□□ 1.97
APOE-202ENST00000425718 SEPT4O43236 478 aa27.38■■□□□ 1.97
APOE-202ENST00000425718 ZNF865P0CJ78 1059 aaPredicted RBP27.38■■□□□ 1.97
APOE-202ENST00000425718 CYP3A7P24462 503 aa27.38■■□□□ 1.97
APOE-202ENST00000425718 PPP4R3AQ6IN85 833 aa27.38■■□□□ 1.97
APOE-202ENST00000425718 GIMAP8Q8ND71 665 aaPredicted RBP27.38■■□□□ 1.97
APOE-202ENST00000425718 SH3TC2Q8TF17 1288 aa27.38■■□□□ 1.97
APOE-202ENST00000425718 KATNBL1Q9H079 304 aa27.38■■□□□ 1.97
APOE-202ENST00000425718 MTMR6Q9Y217 621 aa27.38■■□□□ 1.97
APOE-202ENST00000425718 MYH15Q9Y2K3 1946 aa27.37■■□□□ 1.97
APOE-202ENST00000425718 NUCB2P80303 420 aa27.37■■□□□ 1.97
APOE-202ENST00000425718 MTMR1Q13613 665 aa27.37■■□□□ 1.97
APOE-202ENST00000425718 LETM2Q2VYF4 491 aa27.37■■□□□ 1.97
APOE-202ENST00000425718 SEPT14Q6ZU15 432 aa27.37■■□□□ 1.97
APOE-202ENST00000425718 EEPD1Q7L9B9 569 aa27.37■■□□□ 1.97
APOE-202ENST00000425718 MRVI1Q9Y6F6 885 aa27.37■■□□□ 1.97
APOE-202ENST00000425718 MEIS1O00470 390 aa27.36■■□□□ 1.97
APOE-202ENST00000425718 CNGA1P29973 690 aa27.36■■□□□ 1.97
APOE-202ENST00000425718 CCDC144BQ3MJ40 725 aa27.36■■□□□ 1.97
APOE-202ENST00000425718 TAPT1Q6NXT6 567 aa27.36■■□□□ 1.97
APOE-202ENST00000425718 ZNF333Q96JL9 665 aa27.36■■□□□ 1.97
APOE-202ENST00000425718 SENP7Q9BQF6 1050 aa27.36■■□□□ 1.97
APOE-202ENST00000425718 Q9Y3F1 56 aa27.36■■□□□ 1.97
APOE-202ENST00000425718 ZSCAN22P10073 491 aaPredicted RBP27.35■■□□□ 1.97
APOE-202ENST00000425718 Q4G0T1 1027 aa27.35■■□□□ 1.97
APOE-202ENST00000425718 PLA2G4DQ86XP0 818 aa27.35■■□□□ 1.97
APOE-202ENST00000425718 IPO9Q96P70 1041 aaKnown RBP27.35■■□□□ 1.97
APOE-202ENST00000425718 WDR11Q9BZH6 1224 aa27.35■■□□□ 1.97
APOE-202ENST00000425718 RTEL1Q9NZ71 1219 aa27.35■■□□□ 1.97
APOE-202ENST00000425718 CIZ1Q9ULV3 898 aaPredicted RBP27.35■■□□□ 1.97
APOE-202ENST00000425718 KIF28PB7ZC32 967 aa27.34■■□□□ 1.97
APOE-202ENST00000425718 CCNT1O60563 726 aaKnown RBP27.34■■□□□ 1.97
APOE-202ENST00000425718 TNFAIP2Q03169 654 aa27.34■■□□□ 1.97
APOE-202ENST00000425718 NEDD9Q14511 834 aa27.34■■□□□ 1.97
APOE-202ENST00000425718 DUSP28Q4G0W2 176 aa27.34■■□□□ 1.97
APOE-202ENST00000425718 PRAMEF19Q5SWL8 479 aa27.34■■□□□ 1.97
APOE-202ENST00000425718 MBOAT7Q96N66 472 aa27.34■■□□□ 1.97
APOE-202ENST00000425718 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.34■■□□□ 1.975e-7■■■■■ 39.7
APOE-202ENST00000425718 SPC25Q9HBM1 224 aa27.34■■□□□ 1.97
APOE-202ENST00000425718 DDX25Q9UHL0 483 aaKnown RBP27.34■■□□□ 1.97
APOE-202ENST00000425718 ATP6V1DQ9Y5K8 247 aa27.34■■□□□ 1.97
APOE-202ENST00000425718 FRMPD3Q5JV73 1810 aa27.34■■□□□ 1.97
APOE-202ENST00000425718 SPATA31C2B4DYI2 1134 aa27.33■■□□□ 1.97
APOE-202ENST00000425718 DUSP11O75319 330 aaKnown RBP27.33■■□□□ 1.97
APOE-202ENST00000425718 TXNP10599 105 aaKnown RBP27.33■■□□□ 1.97
APOE-202ENST00000425718 RARBP10826 455 aa27.33■■□□□ 1.97
APOE-202ENST00000425718 ITGB5P18084 799 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms