RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 BMP2KLQ5H9B9 411 aa14.81□□□□□ -0.04
SGCE-203ENST00000425444 SLC30A10Q6XR72 485 aa14.81□□□□□ -0.04
SGCE-203ENST00000425444 SPRED2Q7Z698 418 aa14.81□□□□□ -0.04
SGCE-203ENST00000425444 PHOSPHO2Q8TCD6 241 aa14.81□□□□□ -0.04
SGCE-203ENST00000425444 ESYT1Q9BSJ8 1104 aa14.81□□□□□ -0.04
SGCE-203ENST00000425444 ANO2Q9NQ90 1003 aa14.81□□□□□ -0.04
SGCE-203ENST00000425444 ADD3Q9UEY8 706 aaKnown RBP14.81□□□□□ -0.04
SGCE-203ENST00000425444 GRIN2DO15399 1336 aa14.81□□□□□ -0.04
SGCE-203ENST00000425444 SCN5AQ14524 2016 aa14.8□□□□□ -0.04
SGCE-203ENST00000425444 IL9P15248 144 aa14.8□□□□□ -0.04
SGCE-203ENST00000425444 CALML3P27482 149 aa14.8□□□□□ -0.04
SGCE-203ENST00000425444 WTAPQ15007 396 aa14.8□□□□□ -0.04
SGCE-203ENST00000425444 SEC23AQ15436 765 aa14.8□□□□□ -0.04
SGCE-203ENST00000425444 FSCN1Q16658 493 aaKnown RBP14.8□□□□□ -0.04
SGCE-203ENST00000425444 LEXMQ3ZCV2 418 aa14.8□□□□□ -0.04
SGCE-203ENST00000425444 CASC1Q6TDU7 716 aa14.8□□□□□ -0.04
SGCE-203ENST00000425444 RNF207Q6ZRF8 634 aa14.8□□□□□ -0.04
SGCE-203ENST00000425444 CHST3Q7LGC8 479 aa14.8□□□□□ -0.04
SGCE-203ENST00000425444 HERC6Q8IVU3 1022 aa14.8□□□□□ -0.04
SGCE-203ENST00000425444 FBXO16Q8IX29 292 aaPredicted RBP14.8□□□□□ -0.04
SGCE-203ENST00000425444 ADGRF4Q8IZF3 695 aa14.8□□□□□ -0.04
SGCE-203ENST00000425444 GDPD5Q8WTR4 605 aa14.8□□□□□ -0.04
SGCE-203ENST00000425444 PHOX2BQ99453 314 aa14.8□□□□□ -0.04
SGCE-203ENST00000425444 SEZ6LQ9BYH1 1024 aa14.8□□□□□ -0.04
SGCE-203ENST00000425444 VAT1LQ9HCJ6 419 aa14.8□□□□□ -0.04
SGCE-203ENST00000425444 TAF6LQ9Y6J9 622 aa14.8□□□□□ -0.04
SGCE-203ENST00000425444 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.79□□□□□ -0.04
SGCE-203ENST00000425444 ASTN1O14525 1302 aa14.79□□□□□ -0.04
SGCE-203ENST00000425444 ST18O60284 1047 aa14.79□□□□□ -0.04
SGCE-203ENST00000425444 ZEB2O60315 1214 aa14.79□□□□□ -0.04
SGCE-203ENST00000425444 PSMC6P62333 389 aa14.79□□□□□ -0.04
SGCE-203ENST00000425444 NKX3-2P78367 333 aa14.79□□□□□ -0.04
SGCE-203ENST00000425444 TNFAIP2Q03169 654 aa14.79□□□□□ -0.04
SGCE-203ENST00000425444 PTCRAQ6ISU1 281 aaPredicted RBP14.79□□□□□ -0.04
SGCE-203ENST00000425444 STOX1Q6ZVD7 989 aa14.79□□□□□ -0.04
SGCE-203ENST00000425444 EEPD1Q7L9B9 569 aa14.79□□□□□ -0.04
SGCE-203ENST00000425444 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.79□□□□□ -0.04
SGCE-203ENST00000425444 CLEC4DQ8WXI8 215 aa14.79□□□□□ -0.04
SGCE-203ENST00000425444 PURBQ96QR8 312 aaKnown RBP14.79□□□□□ -0.04
SGCE-203ENST00000425444 MPHOSPH6Q99547 160 aaKnown RBP14.79□□□□□ -0.04
SGCE-203ENST00000425444 LSG1Q9H089 658 aaKnown RBP14.79□□□□□ -0.04
SGCE-203ENST00000425444 AP5M1Q9H0R1 490 aa14.79□□□□□ -0.04
SGCE-203ENST00000425444 LMCD1Q9NZU5 365 aa14.79□□□□□ -0.04
SGCE-203ENST00000425444 COL4A4P53420 1690 aaPredicted RBP14.78□□□□□ -0.04
SGCE-203ENST00000425444 ABCB11O95342 1321 aa14.78□□□□□ -0.04
SGCE-203ENST00000425444 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.78□□□□□ -0.04
SGCE-203ENST00000425444 CYP2C9P11712 490 aa14.78□□□□□ -0.04
SGCE-203ENST00000425444 ALDH5A1P51649 535 aaPredicted RBP14.78□□□□□ -0.04
SGCE-203ENST00000425444 RPS6P62753 249 aaKnown RBP14.78□□□□□ -0.04
SGCE-203ENST00000425444 QRICH1Q2TAL8 776 aa14.78□□□□□ -0.04
SGCE-203ENST00000425444 HFE2Q6ZVN8 426 aa14.78□□□□□ -0.04
SGCE-203ENST00000425444 TLK2Q86UE8 772 aa14.78□□□□□ -0.04
SGCE-203ENST00000425444 FBXO11Q86XK2 927 aa14.78□□□□□ -0.04
SGCE-203ENST00000425444 STAG2Q8N3U4 1231 aa14.78□□□□□ -0.04
SGCE-203ENST00000425444 KATNBL1Q9H079 304 aa14.78□□□□□ -0.04
SGCE-203ENST00000425444 ALDH8A1Q9H2A2 487 aaPredicted RBP14.78□□□□□ -0.04
SGCE-203ENST00000425444 DDX49Q9Y6V7 483 aaKnown RBP14.78□□□□□ -0.04
SGCE-203ENST00000425444 TET1Q8NFU7 2136 aa14.77□□□□□ -0.04
SGCE-203ENST00000425444 POTEB3A0JP26 581 aa14.77□□□□□ -0.05
SGCE-203ENST00000425444 KLRF2D3W0D1 207 aa14.77□□□□□ -0.05
SGCE-203ENST00000425444 DYNC1LI2O43237 492 aaPredicted RBP14.77□□□□□ -0.05
SGCE-203ENST00000425444 SUPT20HL2P0C7V6 817 aa14.77□□□□□ -0.05
SGCE-203ENST00000425444 POTEBQ6S5H4 581 aa14.77□□□□□ -0.05
SGCE-203ENST00000425444 CATIPQ7Z7H3 387 aa14.77□□□□□ -0.05
SGCE-203ENST00000425444 MB21D2Q8IYB1 491 aaPredicted RBP14.77□□□□□ -0.05
SGCE-203ENST00000425444 MFSD14AQ96MC6 490 aa14.77□□□□□ -0.05
SGCE-203ENST00000425444 FTOQ9C0B1 505 aaKnown RBP eCLIP14.77□□□□□ -0.05
SGCE-203ENST00000425444 JMJD4Q9H9V9 463 aa14.77□□□□□ -0.05
SGCE-203ENST00000425444 VTA1Q9NP79 307 aa14.77□□□□□ -0.05
SGCE-203ENST00000425444 TRMT13Q9NUP7 481 aaKnown RBP14.77□□□□□ -0.05
SGCE-203ENST00000425444 MAD2L2Q9UI95 211 aa14.77□□□□□ -0.05
SGCE-203ENST00000425444 MTUS1Q9ULD2 1270 aa14.77□□□□□ -0.05
SGCE-203ENST00000425444 DMDP11532 3685 aa14.77□□□□□ -0.05
SGCE-203ENST00000425444 LOC102724159A0A0B4J2E5 919 aa14.76□□□□□ -0.05
SGCE-203ENST00000425444 GRXCR2A6NFK2 248 aa14.76□□□□□ -0.05
SGCE-203ENST00000425444 B4DLN1 442 aa14.76□□□□□ -0.05
SGCE-203ENST00000425444 SLC27A2O14975 620 aa14.76□□□□□ -0.05
SGCE-203ENST00000425444 CDC45O75419 566 aa14.76□□□□□ -0.05
SGCE-203ENST00000425444 PTGS1P23219 599 aa14.76□□□□□ -0.05
SGCE-203ENST00000425444 MRPL12P52815 198 aaKnown RBP14.76□□□□□ -0.05
SGCE-203ENST00000425444 ANTXR2P58335 489 aa14.76□□□□□ -0.05
SGCE-203ENST00000425444 PDE4DQ08499 809 aa14.76□□□□□ -0.05
SGCE-203ENST00000425444 PWP2Q15269 919 aaKnown RBP14.76□□□□□ -0.05
SGCE-203ENST00000425444 CREB3L3Q68CJ9 461 aa14.76□□□□□ -0.05
SGCE-203ENST00000425444 HOMER1Q86YM7 354 aa14.76□□□□□ -0.05
SGCE-203ENST00000425444 MCF2L2Q86YR7 1114 aa14.76□□□□□ -0.05
SGCE-203ENST00000425444 GNEQ9Y223 722 aaKnown RBP14.76□□□□□ -0.05
SGCE-203ENST00000425444 MRPL11Q9Y3B7 192 aaKnown RBP14.76□□□□□ -0.05
SGCE-203ENST00000425444 LCTP09848 1927 aa14.76□□□□□ -0.05
SGCE-203ENST00000425444 VPS13AQ96RL7 3174 aa14.75□□□□□ -0.05
SGCE-203ENST00000425444 LCHNA4D1U4 455 aa14.75□□□□□ -0.05
SGCE-203ENST00000425444 PALM3A6NDB9 673 aaPredicted RBP14.75□□□□□ -0.05
SGCE-203ENST00000425444 PRC1O43663 620 aa14.75□□□□□ -0.05
SGCE-203ENST00000425444 MCM5P33992 734 aa14.75□□□□□ -0.05
SGCE-203ENST00000425444 RFC2P35250 354 aa14.75□□□□□ -0.05
SGCE-203ENST00000425444 FOXK2Q01167 660 aa14.75□□□□□ -0.05
SGCE-203ENST00000425444 GRM4Q14833 912 aa14.75□□□□□ -0.05
SGCE-203ENST00000425444 RNF20Q5VTR2 975 aa14.75□□□□□ -0.05
SGCE-203ENST00000425444 IQSEC1Q6DN90 963 aa14.75□□□□□ -0.05
SGCE-203ENST00000425444 NFXL1Q6ZNB6 911 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms