RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 BTG3Q14201 252 aaPredicted RBP7.57□□□□□ -1.2
SDCBP-203ENST00000424270 GPNMBQ14956 572 aa7.57□□□□□ -1.2
SDCBP-203ENST00000424270 ZNF618Q5T7W0 954 aa7.57□□□□□ -1.2
SDCBP-203ENST00000424270 CHST3Q7LGC8 479 aa7.57□□□□□ -1.2
SDCBP-203ENST00000424270 DCLK2Q8N568 766 aa7.57□□□□□ -1.2
SDCBP-203ENST00000424270 MRPL50Q8N5N7 158 aaKnown RBP7.57□□□□□ -1.2
SDCBP-203ENST00000424270 EFHBQ8N7U6 833 aa7.57□□□□□ -1.2
SDCBP-203ENST00000424270 CHMP4CQ96CF2 233 aa7.57□□□□□ -1.2
SDCBP-203ENST00000424270 NEK1Q96PY6 1258 aa7.57□□□□□ -1.2
SDCBP-203ENST00000424270 ALG1Q9BT22 464 aa7.57□□□□□ -1.2
SDCBP-203ENST00000424270 TLE6Q9H808 572 aa7.57□□□□□ -1.2
SDCBP-203ENST00000424270 SLC38A10Q9HBR0 1119 aa7.57□□□□□ -1.2
SDCBP-203ENST00000424270 CLEC1BQ9P126 229 aa7.57□□□□□ -1.2
SDCBP-203ENST00000424270 ADD3Q9UEY8 706 aaKnown RBP7.57□□□□□ -1.2
SDCBP-203ENST00000424270 FEM1BQ9UK73 627 aa7.57□□□□□ -1.2
SDCBP-203ENST00000424270 FBXL21Q9UKT6 434 aa7.57□□□□□ -1.2
SDCBP-203ENST00000424270 DCHS1Q96JQ0 3298 aa7.57□□□□□ -1.2
SDCBP-203ENST00000424270 MCM3APO60318 1980 aa7.57□□□□□ -1.2
SDCBP-203ENST00000424270 CACNA1HO95180 2353 aa7.56□□□□□ -1.2
SDCBP-203ENST00000424270 CHD8Q9HCK8 2581 aa7.56□□□□□ -1.2
SDCBP-203ENST00000424270 DCDC2BA2VCK2 349 aa7.56□□□□□ -1.2
SDCBP-203ENST00000424270 RSPH10B2B2RC85 870 aa7.56□□□□□ -1.2
SDCBP-203ENST00000424270 NKRFO15226 690 aaKnown RBP eCLIP7.56□□□□□ -1.23e-7■■■■□ 24.1
SDCBP-203ENST00000424270 BRD1O95696 1058 aa7.56□□□□□ -1.2
SDCBP-203ENST00000424270 NDUFB10O96000 172 aa7.56□□□□□ -1.2
SDCBP-203ENST00000424270 RSPH10BP0C881 870 aa7.56□□□□□ -1.2
SDCBP-203ENST00000424270 TXNP10599 105 aaKnown RBP7.56□□□□□ -1.2
SDCBP-203ENST00000424270 ATF7P17544 494 aaPredicted RBP7.56□□□□□ -1.2
SDCBP-203ENST00000424270 CDK8P49336 464 aa7.56□□□□□ -1.2
SDCBP-203ENST00000424270 ADGRD2Q7Z7M1 963 aa7.56□□□□□ -1.2
SDCBP-203ENST00000424270 CCDC105Q8IYK2 499 aa7.56□□□□□ -1.2
SDCBP-203ENST00000424270 RASEFQ8IZ41 740 aa7.56□□□□□ -1.2
SDCBP-203ENST00000424270 STK11IPQ8N1F8 1099 aa7.56□□□□□ -1.2
SDCBP-203ENST00000424270 LRRC47Q8N1G4 583 aaKnown RBP7.56□□□□□ -1.2
SDCBP-203ENST00000424270 DTWD2Q8NBA8 298 aa7.56□□□□□ -1.2
SDCBP-203ENST00000424270 RIN2Q8WYP3 895 aaPredicted RBP7.56□□□□□ -1.2
SDCBP-203ENST00000424270 DHX38Q92620 1227 aaKnown RBP7.56□□□□□ -1.2
SDCBP-203ENST00000424270 SECISBP2LQ93073 1101 aaKnown RBP7.56□□□□□ -1.2
SDCBP-203ENST00000424270 TOP1MTQ969P6 601 aa7.56□□□□□ -1.2
SDCBP-203ENST00000424270 MS4A3Q96HJ5 214 aa7.56□□□□□ -1.2
SDCBP-203ENST00000424270 DBNDD2Q9BQY9 259 aa7.56□□□□□ -1.2
SDCBP-203ENST00000424270 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.56□□□□□ -1.2
SDCBP-203ENST00000424270 TRIOO75962 3097 aa7.56□□□□□ -1.2
SDCBP-203ENST00000424270 ATRXP46100 2492 aa7.56□□□□□ -1.2
SDCBP-203ENST00000424270 PTPDC1A2A3K4 754 aa7.55□□□□□ -1.2
SDCBP-203ENST00000424270 RBAK-RBAKDNI3L0D1 243 aa7.55□□□□□ -1.2
SDCBP-203ENST00000424270 PPFIA3O75145 1194 aa7.55□□□□□ -1.2
SDCBP-203ENST00000424270 HOXB3P14651 431 aaPredicted RBP7.55□□□□□ -1.2
SDCBP-203ENST00000424270 CASTP20810 708 aaKnown RBP7.55□□□□□ -1.2
SDCBP-203ENST00000424270 ATXN1P54253 815 aaKnown RBP7.55□□□□□ -1.2
SDCBP-203ENST00000424270 PTK7Q13308 1070 aa7.55□□□□□ -1.2
SDCBP-203ENST00000424270 TKFCQ3LXA3 575 aa7.55□□□□□ -1.2
SDCBP-203ENST00000424270 SCFD2Q8WU76 684 aa7.55□□□□□ -1.2
SDCBP-203ENST00000424270 COPS5Q92905 334 aa7.55□□□□□ -1.2
SDCBP-203ENST00000424270 FAM212AQ96EL1 285 aa7.55□□□□□ -1.2
SDCBP-203ENST00000424270 PURBQ96QR8 312 aaKnown RBP7.55□□□□□ -1.2
SDCBP-203ENST00000424270 RTP3Q9BQQ7 232 aa7.55□□□□□ -1.2
SDCBP-203ENST00000424270 SMOC2Q9H3U7 446 aa7.55□□□□□ -1.2
SDCBP-203ENST00000424270 DCP1AQ9NPI6 582 aaPredicted RBP7.55□□□□□ -1.2
SDCBP-203ENST00000424270 SMC4Q9NTJ3 1288 aa7.55□□□□□ -1.2
SDCBP-203ENST00000424270 CLIP2Q9UDT6 1046 aa7.55□□□□□ -1.2
SDCBP-203ENST00000424270 USP18Q9UMW8 372 aa7.55□□□□□ -1.2
SDCBP-203ENST00000424270 MYO15AQ9UKN7 3530 aa7.55□□□□□ -1.2
SDCBP-203ENST00000424270 NAV1Q8NEY1 1877 aa7.55□□□□□ -1.2
SDCBP-203ENST00000424270 ADGRA3Q8IWK6 1321 aa7.54□□□□□ -1.2
SDCBP-203ENST00000424270 CYP2D7A0A087X1C5 515 aa7.54□□□□□ -1.2
SDCBP-203ENST00000424270 A6NJR5 290 aa7.54□□□□□ -1.2
SDCBP-203ENST00000424270 TMEM232C9JQI7 657 aa7.54□□□□□ -1.2
SDCBP-203ENST00000424270 C5orf67F2Z3F1 127 aa7.54□□□□□ -1.2
SDCBP-203ENST00000424270 PER2O15055 1255 aa7.54□□□□□ -1.2
SDCBP-203ENST00000424270 ADRB1P08588 477 aa7.54□□□□□ -1.2
SDCBP-203ENST00000424270 CTSHP09668 335 aa7.54□□□□□ -1.2
SDCBP-203ENST00000424270 AOC1P19801 751 aa7.54□□□□□ -1.2
SDCBP-203ENST00000424270 IBSPP21815 317 aaPredicted RBP7.54□□□□□ -1.2
SDCBP-203ENST00000424270 CALML3P27482 149 aa7.54□□□□□ -1.2
SDCBP-203ENST00000424270 TECP42680 631 aa7.54□□□□□ -1.2
SDCBP-203ENST00000424270 TNNI3KQ59H18 835 aa7.54□□□□□ -1.2
SDCBP-203ENST00000424270 SPOUT1Q5T280 376 aaKnown RBP7.54□□□□□ -1.2
SDCBP-203ENST00000424270 SLC9C2Q5TAH2 1124 aa7.54□□□□□ -1.2
SDCBP-203ENST00000424270 LLGL2Q6P1M3 1020 aa7.54□□□□□ -1.2
SDCBP-203ENST00000424270 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.54□□□□□ -1.2
SDCBP-203ENST00000424270 AFG1LQ8WV93 481 aa7.54□□□□□ -1.2
SDCBP-203ENST00000424270 KIF12Q96FN5 646 aa7.54□□□□□ -1.2
SDCBP-203ENST00000424270 RIOK1Q9BRS2 568 aaKnown RBP7.54□□□□□ -1.2
SDCBP-203ENST00000424270 KATNAL1Q9BW62 490 aa7.54□□□□□ -1.2
SDCBP-203ENST00000424270 PLVAPQ9BX97 442 aa7.54□□□□□ -1.2
SDCBP-203ENST00000424270 MKNK2Q9HBH9 465 aa7.54□□□□□ -1.2
SDCBP-203ENST00000424270 CYP39A1Q9NYL5 469 aa7.54□□□□□ -1.2
SDCBP-203ENST00000424270 HDAC6Q9UBN7 1215 aa7.54□□□□□ -1.2
SDCBP-203ENST00000424270 GTF2IRD1Q9UHL9 959 aa7.54□□□□□ -1.2
SDCBP-203ENST00000424270 CCPG1Q9ULG6 757 aa7.54□□□□□ -1.2
SDCBP-203ENST00000424270 PLAGL2Q9UPG8 496 aa7.54□□□□□ -1.2
SDCBP-203ENST00000424270 FPGT-TNNI3KV9GXZ4 949 aa7.54□□□□□ -1.2
SDCBP-203ENST00000424270 GVINP1Q7Z2Y8 2422 aa7.54□□□□□ -1.2
SDCBP-203ENST00000424270 PARP14Q460N5 1801 aa7.54□□□□□ -1.2
SDCBP-203ENST00000424270 ACACBO00763 2458 aa7.53□□□□□ -1.2
SDCBP-203ENST00000424270 FSD2A1L4K1 749 aa7.53□□□□□ -1.2
SDCBP-203ENST00000424270 PRR5-ARHGAP8B1AHC4 643 aa7.53□□□□□ -1.2
SDCBP-203ENST00000424270 B4DLN1 442 aa7.53□□□□□ -1.2
SDCBP-203ENST00000424270 PI15O43692 258 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms