RNA–Protein interactions for RNA: ENST00000424235.1

SNHG17-205, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 764 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-205ENST00000424235 MFSD5Q6N075 450 aa18.62■□□□□ 0.57
SNHG17-205ENST00000424235 CCDC82Q8N4S0 544 aa18.62■□□□□ 0.57
SNHG17-205ENST00000424235 AFG1LQ8WV93 481 aa18.62■□□□□ 0.57
SNHG17-205ENST00000424235 MTMR8Q96EF0 704 aa18.62■□□□□ 0.57
SNHG17-205ENST00000424235 NEK1Q96PY6 1258 aa18.62■□□□□ 0.57
SNHG17-205ENST00000424235 SEZ6LQ9BYH1 1024 aa18.62■□□□□ 0.57
SNHG17-205ENST00000424235 TRPV6Q9H1D0 765 aa18.62■□□□□ 0.57
SNHG17-205ENST00000424235 CYTH3O43739 400 aa18.61■□□□□ 0.57
SNHG17-205ENST00000424235 B4GALT4O60513 344 aa18.61■□□□□ 0.57
SNHG17-205ENST00000424235 PLEKHA8P1O95397 391 aa18.61■□□□□ 0.57
SNHG17-205ENST00000424235 CMTR1Q8N1G2 835 aaKnown RBP18.61■□□□□ 0.57
SNHG17-205ENST00000424235 PPP1R13LQ8WUF5 828 aa18.61■□□□□ 0.57
SNHG17-205ENST00000424235 MTA3Q9BTC8 594 aa18.61■□□□□ 0.57
SNHG17-205ENST00000424235 MAP3K20Q9NYL2 800 aaKnown RBP18.61■□□□□ 0.57
SNHG17-205ENST00000424235 SUPT20HL2P0C7V6 817 aa18.6■□□□□ 0.57
SNHG17-205ENST00000424235 ACRP10323 421 aa18.6■□□□□ 0.57
SNHG17-205ENST00000424235 CSF2RAP15509 400 aa18.6■□□□□ 0.57
SNHG17-205ENST00000424235 EPHB4P54760 987 aa18.6■□□□□ 0.57
SNHG17-205ENST00000424235 CCL23P55773 120 aa18.6■□□□□ 0.57
SNHG17-205ENST00000424235 KRT32Q14532 448 aa18.6■□□□□ 0.57
SNHG17-205ENST00000424235 DHX37Q8IY37 1157 aaKnown RBP18.6■□□□□ 0.57
SNHG17-205ENST00000424235 ZFP91Q96JP5 570 aaPredicted RBP18.6■□□□□ 0.57
SNHG17-205ENST00000424235 TCEANC2Q96MN5 208 aa18.6■□□□□ 0.57
SNHG17-205ENST00000424235 MAP3K14Q99558 947 aa18.6■□□□□ 0.57
SNHG17-205ENST00000424235 PDCD2LQ9BRP1 358 aa18.6■□□□□ 0.57
SNHG17-205ENST00000424235 SPZ1Q9BXG8 430 aa18.6■□□□□ 0.57
SNHG17-205ENST00000424235 ALDH8A1Q9H2A2 487 aaPredicted RBP18.6■□□□□ 0.57
SNHG17-205ENST00000424235 TRMT13Q9NUP7 481 aaKnown RBP18.6■□□□□ 0.57
SNHG17-205ENST00000424235 OPLAHO14841 1288 aa18.59■□□□□ 0.57
SNHG17-205ENST00000424235 LIFRP42702 1097 aa18.59■□□□□ 0.57
SNHG17-205ENST00000424235 PGM5Q15124 567 aa18.59■□□□□ 0.57
SNHG17-205ENST00000424235 SLC35G1Q2M3R5 365 aa18.59■□□□□ 0.57
SNHG17-205ENST00000424235 NBPF20Q3BBV1 942 aa18.59■□□□□ 0.57
SNHG17-205ENST00000424235 ERICH6BQ5W0A0 696 aa18.59■□□□□ 0.57
SNHG17-205ENST00000424235 SAMD3Q8N6K7 520 aa18.59■□□□□ 0.57
SNHG17-205ENST00000424235 GRIN2DO15399 1336 aa18.58■□□□□ 0.57
SNHG17-205ENST00000424235 hCG_1642624A0A1W2PR95 340 aa18.58■□□□□ 0.56
SNHG17-205ENST00000424235 MMP3P08254 477 aa18.58■□□□□ 0.56
SNHG17-205ENST00000424235 CYP2C9P11712 490 aa18.58■□□□□ 0.56
SNHG17-205ENST00000424235 CASTP20810 708 aaKnown RBP18.58■□□□□ 0.56
SNHG17-205ENST00000424235 DGKDQ16760 1214 aa18.58■□□□□ 0.56
SNHG17-205ENST00000424235 GNPTABQ3T906 1256 aa18.58■□□□□ 0.56
SNHG17-205ENST00000424235 PSRC1Q6PGN9 363 aaPredicted RBP18.58■□□□□ 0.56
SNHG17-205ENST00000424235 HEATR3Q7Z4Q2 680 aa18.58■□□□□ 0.56
SNHG17-205ENST00000424235 SLC43A3Q8NBI5 491 aa18.58■□□□□ 0.56
SNHG17-205ENST00000424235 MTIF3Q9H2K0 278 aaKnown RBP18.58■□□□□ 0.56
SNHG17-205ENST00000424235 A6NJR5 290 aa18.57■□□□□ 0.56
SNHG17-205ENST00000424235 CD4P01730 458 aa18.57■□□□□ 0.56
SNHG17-205ENST00000424235 ARHGAP1Q07960 439 aa18.57■□□□□ 0.56
SNHG17-205ENST00000424235 LAMC2Q13753 1193 aa18.57■□□□□ 0.56
SNHG17-205ENST00000424235 CCDC62Q6P9F0 684 aa18.57■□□□□ 0.56
SNHG17-205ENST00000424235 KCNV1Q6PIU1 500 aa18.57■□□□□ 0.56
SNHG17-205ENST00000424235 SRBD1Q8N5C6 995 aaKnown RBP18.57■□□□□ 0.56
SNHG17-205ENST00000424235 FANCBQ8NB91 859 aa18.57■□□□□ 0.56
SNHG17-205ENST00000424235 RETREG2Q8NC44 543 aa18.57■□□□□ 0.56
SNHG17-205ENST00000424235 IL31RAQ8NI17 732 aa18.57■□□□□ 0.56
SNHG17-205ENST00000424235 SPATA33Q96N06 139 aa18.57■□□□□ 0.56
SNHG17-205ENST00000424235 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.57■□□□□ 0.561e-7■■□□□ 11.8
SNHG17-205ENST00000424235 ALG1Q9BT22 464 aa18.57■□□□□ 0.56
SNHG17-205ENST00000424235 MLXIPQ9HAP2 919 aa18.57■□□□□ 0.56
SNHG17-205ENST00000424235 UMODL1Q5DID0 1318 aa18.56■□□□□ 0.56
SNHG17-205ENST00000424235 GOLGA8AA7E2F4 631 aa18.56■□□□□ 0.56
SNHG17-205ENST00000424235 GOLGA8BA8MQT2 603 aa18.56■□□□□ 0.56
SNHG17-205ENST00000424235 ZBBXA8MT70 800 aa18.56■□□□□ 0.56
SNHG17-205ENST00000424235 NOP56O00567 594 aaKnown RBP18.56■□□□□ 0.56
SNHG17-205ENST00000424235 ZBTB43O43298 467 aa18.56■□□□□ 0.56
SNHG17-205ENST00000424235 REC8O95072 547 aa18.56■□□□□ 0.56
SNHG17-205ENST00000424235 GGPS1O95749 300 aa18.56■□□□□ 0.56
SNHG17-205ENST00000424235 HMGB1P09429 215 aaKnown RBP18.56■□□□□ 0.56
SNHG17-205ENST00000424235 ZNF286BP0CG31 522 aa18.56■□□□□ 0.56
SNHG17-205ENST00000424235 RTN1Q16799 776 aa18.56■□□□□ 0.56
SNHG17-205ENST00000424235 DHX32Q7L7V1 743 aaKnown RBP18.56■□□□□ 0.56
SNHG17-205ENST00000424235 C7orf31Q8N865 590 aa18.56■□□□□ 0.56
SNHG17-205ENST00000424235 JAKMIP1Q96N16 626 aaKnown RBP18.56■□□□□ 0.56
SNHG17-205ENST00000424235 CDX2Q99626 313 aaPredicted RBP18.56■□□□□ 0.56
SNHG17-205ENST00000424235 NOC4LQ9BVI4 516 aaKnown RBP18.56■□□□□ 0.56
SNHG17-205ENST00000424235 RBM28Q9NW13 759 aaKnown RBP18.56■□□□□ 0.56
SNHG17-205ENST00000424235 DDX41Q9UJV9 622 aaKnown RBP18.56■□□□□ 0.56
SNHG17-205ENST00000424235 BAZ2BQ9UIF8 2168 aaKnown RBP18.55■□□□□ 0.56
SNHG17-205ENST00000424235 KLF18A0A0U1RQI7 1052 aa18.55■□□□□ 0.56
SNHG17-205ENST00000424235 COL9A3Q14050 684 aaPredicted RBP18.55■□□□□ 0.56
SNHG17-205ENST00000424235 NFRKBQ6P4R8 1299 aa18.55■□□□□ 0.56
SNHG17-205ENST00000424235 USP17L6PQ6QN14 398 aa18.55■□□□□ 0.56
SNHG17-205ENST00000424235 TMTC3Q6ZXV5 915 aa18.55■□□□□ 0.56
SNHG17-205ENST00000424235 ZNF365Q70YC5 407 aa18.55■□□□□ 0.56
SNHG17-205ENST00000424235 RASEFQ8IZ41 740 aa18.55■□□□□ 0.56
SNHG17-205ENST00000424235 SCLYQ96I15 445 aa18.55■□□□□ 0.56
SNHG17-205ENST00000424235 KATNAL1Q9BW62 490 aa18.55■□□□□ 0.56
SNHG17-205ENST00000424235 PSTPIP2Q9H939 334 aa18.55■□□□□ 0.56
SNHG17-205ENST00000424235 IL23AQ9NPF7 189 aa18.55■□□□□ 0.56
SNHG17-205ENST00000424235 RTEL1Q9NZ71 1219 aa18.55■□□□□ 0.56
SNHG17-205ENST00000424235 SPDYE3A6NKU9 549 aa18.54■□□□□ 0.56
SNHG17-205ENST00000424235 FGBP02675 491 aa18.54■□□□□ 0.56
SNHG17-205ENST00000424235 SMARCA1P28370 1054 aa18.54■□□□□ 0.56
SNHG17-205ENST00000424235 SMAD3P84022 425 aaKnown RBP18.54■□□□□ 0.56
SNHG17-205ENST00000424235 SP4Q02446 784 aa18.54■□□□□ 0.56
SNHG17-205ENST00000424235 GHRHRQ02643 423 aa18.54■□□□□ 0.56
SNHG17-205ENST00000424235 PTGISQ16647 500 aa18.54■□□□□ 0.56
SNHG17-205ENST00000424235 ADCK5Q3MIX3 580 aa18.54■□□□□ 0.56
SNHG17-205ENST00000424235 APOA5Q6Q788 366 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms