RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 CCDC62Q6P9F0 684 aa18.8■□□□□ 0.6
COL18A1-205ENST00000423214 SLC9A7Q96T83 725 aa18.8■□□□□ 0.6
COL18A1-205ENST00000423214 AMNQ9BXJ7 453 aa18.8■□□□□ 0.6
COL18A1-205ENST00000423214 PRDM6Q9NQX0 595 aa18.8■□□□□ 0.6
COL18A1-205ENST00000423214 TCF20Q9UGU0 1960 aaKnown RBP18.8■□□□□ 0.6
COL18A1-205ENST00000423214 KAT6AQ92794 2004 aa18.79■□□□□ 0.6
COL18A1-205ENST00000423214 TRANK1O15050 2925 aa18.79■□□□□ 0.6
COL18A1-205ENST00000423214 IQCF3P0C7M6 154 aa18.79■□□□□ 0.6
COL18A1-205ENST00000423214 MYOGP15173 224 aa18.79■□□□□ 0.6
COL18A1-205ENST00000423214 CASTP20810 708 aaKnown RBP18.79■□□□□ 0.6
COL18A1-205ENST00000423214 ADGRE1Q14246 886 aa18.79■□□□□ 0.6
COL18A1-205ENST00000423214 CCDC85BQ15834 202 aaPredicted RBP18.79■□□□□ 0.6
COL18A1-205ENST00000423214 TMEM67Q5HYA8 995 aa18.79■□□□□ 0.6
COL18A1-205ENST00000423214 MICALL1Q8N3F8 863 aa18.79■□□□□ 0.6
COL18A1-205ENST00000423214 CAGE1Q8TC20 777 aa18.79■□□□□ 0.6
COL18A1-205ENST00000423214 VWCEQ96DN2 955 aa18.79■□□□□ 0.6
COL18A1-205ENST00000423214 KATNAL1Q9BW62 490 aa18.79■□□□□ 0.6
COL18A1-205ENST00000423214 PXMP2Q9NR77 195 aa18.79■□□□□ 0.6
COL18A1-205ENST00000423214 MRVI1Q9Y6F6 885 aa18.79■□□□□ 0.6
COL18A1-205ENST00000423214 PRRC2BQ5JSZ5 2229 aaKnown RBP18.79■□□□□ 0.6
COL18A1-205ENST00000423214 SIP14410 1827 aa18.79■□□□□ 0.6
COL18A1-205ENST00000423214 NCOR1O75376 2440 aa18.79■□□□□ 0.6
COL18A1-205ENST00000423214 KLRF2D3W0D1 207 aa18.78■□□□□ 0.6
COL18A1-205ENST00000423214 DGKDQ16760 1214 aa18.78■□□□□ 0.6
COL18A1-205ENST00000423214 STAG2Q8N3U4 1231 aa18.78■□□□□ 0.6
COL18A1-205ENST00000423214 IL27Q8NEV9 243 aa18.78■□□□□ 0.6
COL18A1-205ENST00000423214 ERICH2A1L162 156 aa18.77■□□□□ 0.6
COL18A1-205ENST00000423214 CA3P07451 260 aa18.77■□□□□ 0.6
COL18A1-205ENST00000423214 NR3C2P08235 984 aa18.77■□□□□ 0.6
COL18A1-205ENST00000423214 KCNJ6P48051 423 aa18.77■□□□□ 0.6
COL18A1-205ENST00000423214 HSD17B4P51659 736 aa18.77■□□□□ 0.6
COL18A1-205ENST00000423214 TTC22Q5TAA0 569 aa18.77■□□□□ 0.6
COL18A1-205ENST00000423214 GDF6Q6KF10 455 aaPredicted RBP18.77■□□□□ 0.6
COL18A1-205ENST00000423214 SESTD1Q86VW0 696 aa18.77■□□□□ 0.6
COL18A1-205ENST00000423214 HOMER1Q86YM7 354 aa18.77■□□□□ 0.6
COL18A1-205ENST00000423214 AFAP1L1Q8TED9 768 aa18.77■□□□□ 0.6
COL18A1-205ENST00000423214 ATXN2LQ8WWM7 1075 aaKnown RBP18.77■□□□□ 0.6
COL18A1-205ENST00000423214 RUFY2Q8WXA3 655 aa18.77■□□□□ 0.6
COL18A1-205ENST00000423214 IL25Q9H293 177 aa18.77■□□□□ 0.6
COL18A1-205ENST00000423214 TSPYL2Q9H2G4 693 aaPredicted RBP18.77■□□□□ 0.6
COL18A1-205ENST00000423214 ZBTB5O15062 677 aa18.76■□□□□ 0.59
COL18A1-205ENST00000423214 EIF3JO75822 258 aaKnown RBP18.76■□□□□ 0.59
COL18A1-205ENST00000423214 BAIAP3O94812 1187 aa18.76■□□□□ 0.59
COL18A1-205ENST00000423214 MYCLP12524 364 aaPredicted RBP18.76■□□□□ 0.59
COL18A1-205ENST00000423214 TRAF1Q13077 416 aa18.76■□□□□ 0.59
COL18A1-205ENST00000423214 SEC23AQ15436 765 aa18.76■□□□□ 0.59
COL18A1-205ENST00000423214 CYB5R4Q7L1T6 521 aa18.76■□□□□ 0.59
COL18A1-205ENST00000423214 RALYLQ86SE5 291 aaKnown RBP18.76■□□□□ 0.59
COL18A1-205ENST00000423214 DHX37Q8IY37 1157 aaKnown RBP18.76■□□□□ 0.59
COL18A1-205ENST00000423214 C7orf31Q8N865 590 aa18.76■□□□□ 0.59
COL18A1-205ENST00000423214 EMID1Q96A84 441 aaPredicted RBP18.76■□□□□ 0.59
COL18A1-205ENST00000423214 MAD2L2Q9UI95 211 aa18.76■□□□□ 0.59
COL18A1-205ENST00000423214 PCDHA1Q9Y5I3 950 aa18.76■□□□□ 0.59
COL18A1-205ENST00000423214 REV3LO60673 3130 aa18.76■□□□□ 0.59
COL18A1-205ENST00000423214 KIF28PB7ZC32 967 aa18.75■□□□□ 0.59
COL18A1-205ENST00000423214 ZNF286BP0CG31 522 aa18.75■□□□□ 0.59
COL18A1-205ENST00000423214 GSPT1P15170 499 aaKnown RBP18.75■□□□□ 0.59
COL18A1-205ENST00000423214 PSEN2P49810 448 aa18.75■□□□□ 0.59
COL18A1-205ENST00000423214 LAMC2Q13753 1193 aa18.75■□□□□ 0.59
COL18A1-205ENST00000423214 SART3Q15020 963 aaKnown RBP18.75■□□□□ 0.59
COL18A1-205ENST00000423214 LRRC8DQ7L1W4 858 aa18.75■□□□□ 0.59
COL18A1-205ENST00000423214 PPTC7Q8NI37 304 aa18.75■□□□□ 0.59
COL18A1-205ENST00000423214 PHOSPHO2Q8TCD6 241 aa18.75■□□□□ 0.59
COL18A1-205ENST00000423214 PDCD2LQ9BRP1 358 aa18.75■□□□□ 0.59
COL18A1-205ENST00000423214 ALG1Q9BT22 464 aa18.75■□□□□ 0.59
COL18A1-205ENST00000423214 MAP3K20Q9NYL2 800 aaKnown RBP18.75■□□□□ 0.59
COL18A1-205ENST00000423214 DDX41Q9UJV9 622 aaKnown RBP18.75■□□□□ 0.59
COL18A1-205ENST00000423214 U3KPZ7 1027 aaPredicted RBP18.75■□□□□ 0.59
COL18A1-205ENST00000423214 NLRC5Q86WI3 1866 aa18.74■□□□□ 0.59
COL18A1-205ENST00000423214 OPLAHO14841 1288 aa18.74■□□□□ 0.59
COL18A1-205ENST00000423214 IFIT3O14879 490 aaKnown RBP18.74■□□□□ 0.59
COL18A1-205ENST00000423214 GTPBP6O43824 516 aaPredicted RBP18.74■□□□□ 0.59
COL18A1-205ENST00000423214 SELPP16109 830 aa18.74■□□□□ 0.59
COL18A1-205ENST00000423214 MRPS5P82675 430 aaKnown RBP18.74■□□□□ 0.59
COL18A1-205ENST00000423214 GHRHRQ02643 423 aa18.74■□□□□ 0.59
COL18A1-205ENST00000423214 MFSD10Q14728 455 aa18.74■□□□□ 0.59
COL18A1-205ENST00000423214 KCNV1Q6PIU1 500 aa18.74■□□□□ 0.59
COL18A1-205ENST00000423214 HERC6Q8IVU3 1022 aa18.74■□□□□ 0.59
COL18A1-205ENST00000423214 KAT2BQ92831 832 aa18.74■□□□□ 0.59
COL18A1-205ENST00000423214 GTF2IRD1Q9UHL9 959 aa18.74■□□□□ 0.59
COL18A1-205ENST00000423214 MUC3AQ02505 3323 aa18.74■□□□□ 0.59
COL18A1-205ENST00000423214 PALM3A6NDB9 673 aaPredicted RBP18.73■□□□□ 0.59
COL18A1-205ENST00000423214 TNFRSF10AO00220 468 aa18.73■□□□□ 0.59
COL18A1-205ENST00000423214 PPP1R11O60927 126 aaPredicted RBP18.73■□□□□ 0.59
COL18A1-205ENST00000423214 PARNO95453 639 aaKnown RBP18.73■□□□□ 0.59
COL18A1-205ENST00000423214 F2P00734 622 aa18.73■□□□□ 0.59
COL18A1-205ENST00000423214 PDE4AP27815 886 aa18.73■□□□□ 0.59
COL18A1-205ENST00000423214 HOXA13P31271 388 aaPredicted RBP18.73■□□□□ 0.59
COL18A1-205ENST00000423214 GRM4Q14833 912 aa18.73■□□□□ 0.59
COL18A1-205ENST00000423214 WTAPQ15007 396 aa18.73■□□□□ 0.59
COL18A1-205ENST00000423214 PGM5Q15124 567 aa18.73■□□□□ 0.59
COL18A1-205ENST00000423214 KIAA0753Q2KHM9 967 aa18.73■□□□□ 0.59
COL18A1-205ENST00000423214 SAMD3Q8N6K7 520 aa18.73■□□□□ 0.59
COL18A1-205ENST00000423214 MTMR8Q96EF0 704 aa18.73■□□□□ 0.59
COL18A1-205ENST00000423214 ASB2Q96Q27 587 aa18.73■□□□□ 0.59
COL18A1-205ENST00000423214 CERS4Q9HA82 394 aa18.73■□□□□ 0.59
COL18A1-205ENST00000423214 HDAC6Q9UBN7 1215 aa18.73■□□□□ 0.59
COL18A1-205ENST00000423214 TLL1O43897 1013 aa18.72■□□□□ 0.59
COL18A1-205ENST00000423214 SORBS3O60504 671 aa18.72■□□□□ 0.59
COL18A1-205ENST00000423214 GGPS1O95749 300 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms