RNA–Protein interactions for RNA: ENST00000420665.5

LRRFIP1-205, Transcript of LRR binding FLII interacting protein 1, human

TSL 3

Gene LRRFIP1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRFIP1-205	ENST00000420665	RTP1	P59025	263 aa		27.64	■■■□□ 2.02
LRRFIP1-205	ENST00000420665	AKAP17A	Q02040	695 aa	Known RBP	27.64	■■■□□ 2.02
LRRFIP1-205	ENST00000420665	CCDC62	Q6P9F0	684 aa		27.64	■■■□□ 2.02
LRRFIP1-205	ENST00000420665	OR6J1	Q8NGC5	347 aa		27.64	■■■□□ 2.02
LRRFIP1-205	ENST00000420665	COPS5	Q92905	334 aa		27.64	■■■□□ 2.02
LRRFIP1-205	ENST00000420665	SLC26A6	Q9BXS9	759 aa		27.64	■■■□□ 2.02
LRRFIP1-205	ENST00000420665	RNF26	Q9BY78	433 aa	Predicted RBP	27.64	■■■□□ 2.02
LRRFIP1-205	ENST00000420665	KIAA1217	Q5T5P2	1943 aa		27.63	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	ADCY7	P51828	1080 aa		27.63	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	SNX17	Q15036	470 aa		27.63	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	ANKRD1	Q15327	319 aa		27.63	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	PKN1	Q16512	942 aa		27.63	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	ZFP91	Q96JP5	570 aa	Predicted RBP	27.63	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	RIC8A	Q9NPQ8	531 aa		27.63	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	STARD7	Q9NQZ5	370 aa		27.63	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	TPCN1	Q9ULQ1	816 aa		27.63	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	MRVI1	Q9Y6F6	885 aa		27.63	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	CPLX1	O14810	134 aa		27.62	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	RGS20	O76081	388 aa		27.62	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	NEK4	P51957	841 aa		27.62	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	LY6K	Q17RY6	165 aa		27.62	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	GLT1D1	Q96MS3	346 aa		27.62	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	ATP11B	Q9Y2G3	1177 aa		27.62	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	GTF3C3	Q9Y5Q9	886 aa		27.62	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	SPDYE3	A6NKU9	549 aa		27.61	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	ZEB2	O60315	1214 aa		27.61	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	TRIM60	Q495X7	471 aa		27.61	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	SMCO2	A6NFE2	343 aa		27.6	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	CPT1A	P50416	773 aa		27.6	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	MRPS9	P82933	396 aa	Known RBP	27.6	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	C1orf53	Q5VUE5	145 aa		27.6	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	PCNX4	Q63HM2	1172 aa		27.6	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	CXCL17	Q6UXB2	119 aa		27.6	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	TEX2	Q8IWB9	1127 aa		27.6	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	TRIM22	Q8IYM9	498 aa		27.6	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	SLK	Q9H2G2	1235 aa	Predicted RBP	27.6	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	27.6	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	STAM2	O75886	525 aa		27.59	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	GH1	P01241	217 aa		27.59	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	SCRN1	Q12765	414 aa		27.59	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	CPLX2	Q6PUV4	134 aa	Known RBP	27.59	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	DDX41	Q9UJV9	622 aa	Known RBP	27.59	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	PCDHA6	Q9UN73	950 aa		27.59	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	PCDHA8	Q9Y5H6	950 aa		27.59	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	ELP1	O95163	1332 aa		27.59	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	PFKFB2	O60825	505 aa		27.58	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	ARHGAP1	Q07960	439 aa		27.58	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	SSRP1	Q08945	709 aa	Known RBP	27.58	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	XRRA1	Q6P2D8	792 aa		27.58	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	CCDC12	Q8WUD4	166 aa	Predicted RBP	27.58	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	VTI1A	Q96AJ9	217 aa		27.58	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	INPP4A	Q96PE3	977 aa	Predicted RBP	27.58	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	C22orf23	Q9BZE7	217 aa		27.58	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	GLT8D2	Q9H1C3	349 aa		27.58	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	RTEL1	Q9NZ71	1219 aa		27.58	■■■□□ 2.01
LRRFIP1-205	ENST00000420665	ESYT2	A0FGR8	921 aa		27.57	■■■□□ 2
LRRFIP1-205	ENST00000420665	CABYR	O75952	493 aa		27.57	■■■□□ 2
LRRFIP1-205	ENST00000420665	SYN1	P17600	705 aa		27.57	■■■□□ 2
LRRFIP1-205	ENST00000420665	GNPTAB	Q3T906	1256 aa		27.57	■■■□□ 2
LRRFIP1-205	ENST00000420665	BRDT	Q58F21	947 aa	Predicted RBP	27.57	■■■□□ 2
LRRFIP1-205	ENST00000420665	KCNV1	Q6PIU1	500 aa		27.57	■■■□□ 2
LRRFIP1-205	ENST00000420665	EHMT1	Q9H9B1	1298 aa		27.57	■■■□□ 2
LRRFIP1-205	ENST00000420665		A0A0U1RQG5	324 aa	Predicted RBP	27.56	■■■□□ 2
LRRFIP1-205	ENST00000420665	PGBD1	Q96JS3	809 aa		27.56	■■■□□ 2
LRRFIP1-205	ENST00000420665	ZMYND12	Q9H0C1	365 aa		27.56	■■■□□ 2
LRRFIP1-205	ENST00000420665	POLR3E	Q9NVU0	708 aa		27.56	■■■□□ 2
LRRFIP1-205	ENST00000420665		A6NJR5	290 aa		27.55	■■■□□ 2
LRRFIP1-205	ENST00000420665	PQBP1	O60828	265 aa	Known RBP	27.55	■■■□□ 2
LRRFIP1-205	ENST00000420665	CDKL5	O76039	1030 aa		27.55	■■■□□ 2
LRRFIP1-205	ENST00000420665	MYL3	P08590	195 aa		27.55	■■■□□ 2
LRRFIP1-205	ENST00000420665	UBA1	P22314	1058 aa	Known RBP	27.55	■■■□□ 2
LRRFIP1-205	ENST00000420665	RBM25	P49756	843 aa	Known RBP	27.55	■■■□□ 2
LRRFIP1-205	ENST00000420665	PURA	Q00577	322 aa	Known RBP	27.55	■■■□□ 2
LRRFIP1-205	ENST00000420665	TLE2	Q04725	743 aa		27.55	■■■□□ 2
LRRFIP1-205	ENST00000420665	CCDC148	Q8NFR7	591 aa		27.55	■■■□□ 2
LRRFIP1-205	ENST00000420665	AFG1L	Q8WV93	481 aa		27.55	■■■□□ 2
LRRFIP1-205	ENST00000420665	KIF2C	Q99661	725 aa		27.55	■■■□□ 2
LRRFIP1-205	ENST00000420665	ANO3	Q9BYT9	981 aa		27.55	■■■□□ 2
LRRFIP1-205	ENST00000420665	C6orf50	Q9HD87	102 aa		27.55	■■■□□ 2
LRRFIP1-205	ENST00000420665	TMEM260	Q9NX78	707 aa		27.55	■■■□□ 2
LRRFIP1-205	ENST00000420665	VPS54	Q9P1Q0	977 aa		27.55	■■■□□ 2
LRRFIP1-205	ENST00000420665	DEXI	O95424	95 aa		27.54	■■■□□ 2
LRRFIP1-205	ENST00000420665	LARGE1	O95461	756 aa		27.54	■■■□□ 2
LRRFIP1-205	ENST00000420665	FOS	P01100	380 aa	Predicted RBP	27.54	■■■□□ 2
LRRFIP1-205	ENST00000420665	TGFB3	P10600	412 aa		27.54	■■■□□ 2
LRRFIP1-205	ENST00000420665	CLK2	P49760	499 aa	Known RBP	27.54	■■■□□ 2
LRRFIP1-205	ENST00000420665	AP3B2	Q13367	1082 aa		27.54	■■■□□ 2
LRRFIP1-205	ENST00000420665	ME3	Q16798	604 aa		27.54	■■■□□ 2
LRRFIP1-205	ENST00000420665	EMID1	Q96A84	441 aa	Predicted RBP	27.54	■■■□□ 2
LRRFIP1-205	ENST00000420665	PCDH10	Q9P2E7	1040 aa		27.54	■■■□□ 2
LRRFIP1-205	ENST00000420665	FIBP	O43427	364 aa		27.53	■■■□□ 2
LRRFIP1-205	ENST00000420665	GGPS1	O95749	300 aa		27.53	■■■□□ 2
LRRFIP1-205	ENST00000420665	MMP3	P08254	477 aa		27.53	■■■□□ 2
LRRFIP1-205	ENST00000420665	ICAM3	P32942	547 aa		27.53	■■■□□ 2
LRRFIP1-205	ENST00000420665	SP2	Q02086	613 aa		27.53	■■■□□ 2
LRRFIP1-205	ENST00000420665	DHX37	Q8IY37	1157 aa	Known RBP	27.53	■■■□□ 2
LRRFIP1-205	ENST00000420665	UPF2	Q9HAU5	1272 aa	Known RBP	27.53	■■■□□ 2
LRRFIP1-205	ENST00000420665	SPATA31C2	B4DYI2	1134 aa		27.52	■■■□□ 2
LRRFIP1-205	ENST00000420665	ARVCF	O00192	962 aa		27.52	■■■□□ 2
LRRFIP1-205	ENST00000420665	SORBS3	O60504	671 aa		27.52	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms