RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 USP17L6PQ6QN14 398 aa15.32■□□□□ 0.04
TMEM248-203ENST00000418375 EEPD1Q7L9B9 569 aa15.32■□□□□ 0.04
TMEM248-203ENST00000418375 FBXO16Q8IX29 292 aaPredicted RBP15.32■□□□□ 0.04
TMEM248-203ENST00000418375 GTF3C6Q969F1 213 aa15.32■□□□□ 0.04
TMEM248-203ENST00000418375 ZSCAN31Q96LW9 406 aaPredicted RBP15.32■□□□□ 0.04
TMEM248-203ENST00000418375 SMCO2A6NFE2 343 aa15.31■□□□□ 0.04
TMEM248-203ENST00000418375 SPDYE3A6NKU9 549 aa15.31■□□□□ 0.04
TMEM248-203ENST00000418375 PPFIA3O75145 1194 aa15.31■□□□□ 0.04
TMEM248-203ENST00000418375 NR3C2P08235 984 aa15.31■□□□□ 0.04
TMEM248-203ENST00000418375 SNX17Q15036 470 aa15.31■□□□□ 0.04
TMEM248-203ENST00000418375 TRIM60Q495X7 471 aa15.31■□□□□ 0.04
TMEM248-203ENST00000418375 IQSEC1Q6DN90 963 aa15.31■□□□□ 0.04
TMEM248-203ENST00000418375 TYW1BQ6NUM6 668 aa15.31■□□□□ 0.04
TMEM248-203ENST00000418375 NECAB1Q8N987 351 aa15.31■□□□□ 0.04
TMEM248-203ENST00000418375 CCDC148Q8NFR7 591 aa15.31■□□□□ 0.04
TMEM248-203ENST00000418375 PDCD2LQ9BRP1 358 aa15.31■□□□□ 0.04
TMEM248-203ENST00000418375 RIC8AQ9NPQ8 531 aa15.31■□□□□ 0.04
TMEM248-203ENST00000418375 PHF24Q9UPV7 400 aa15.31■□□□□ 0.04
TMEM248-203ENST00000418375 DDX49Q9Y6V7 483 aaKnown RBP15.31■□□□□ 0.04
TMEM248-203ENST00000418375 ESYT2A0FGR8 921 aa15.3■□□□□ 0.04
TMEM248-203ENST00000418375 DUSP11O75319 330 aaKnown RBP15.3■□□□□ 0.04
TMEM248-203ENST00000418375 EIF3JO75822 258 aaKnown RBP15.3■□□□□ 0.04
TMEM248-203ENST00000418375 LARGE1O95461 756 aa15.3■□□□□ 0.04
TMEM248-203ENST00000418375 GNA11P29992 359 aa15.3■□□□□ 0.04
TMEM248-203ENST00000418375 TNFAIP2Q03169 654 aa15.3■□□□□ 0.04
TMEM248-203ENST00000418375 PGM5Q15124 567 aa15.3■□□□□ 0.04
TMEM248-203ENST00000418375 C1orf53Q5VUE5 145 aa15.3■□□□□ 0.04
TMEM248-203ENST00000418375 GPR153Q6NV75 609 aa15.3■□□□□ 0.04
TMEM248-203ENST00000418375 TAPT1Q6NXT6 567 aa15.3■□□□□ 0.04
TMEM248-203ENST00000418375 DNAH12Q6ZR08 3092 aa15.3■□□□□ 0.04
TMEM248-203ENST00000418375 LENG1Q96BZ8 264 aaPredicted RBP15.3■□□□□ 0.04
TMEM248-203ENST00000418375 EHMT1Q9H9B1 1298 aa15.3■□□□□ 0.04
TMEM248-203ENST00000418375 SPC25Q9HBM1 224 aa15.3■□□□□ 0.04
TMEM248-203ENST00000418375 C6orf50Q9HD87 102 aa15.3■□□□□ 0.04
TMEM248-203ENST00000418375 PRDM5Q9NQX1 630 aaPredicted RBP15.3■□□□□ 0.04
TMEM248-203ENST00000418375 SH3GLB2Q9NR46 395 aa15.3■□□□□ 0.04
TMEM248-203ENST00000418375 SH2B1Q9NRF2 756 aaPredicted RBP15.3■□□□□ 0.04
TMEM248-203ENST00000418375 STK36Q9NRP7 1315 aa15.3■□□□□ 0.04
TMEM248-203ENST00000418375 FRMPD4Q14CM0 1322 aa15.29■□□□□ 0.04
TMEM248-203ENST00000418375 ADAMTS4O75173 837 aa15.29■□□□□ 0.04
TMEM248-203ENST00000418375 FOSP01100 380 aaPredicted RBP15.29■□□□□ 0.04
TMEM248-203ENST00000418375 MYCLP12524 364 aaPredicted RBP15.29■□□□□ 0.04
TMEM248-203ENST00000418375 CCND2P30279 289 aa15.29■□□□□ 0.04
TMEM248-203ENST00000418375 MCM2P49736 904 aa15.29■□□□□ 0.04
TMEM248-203ENST00000418375 UBE2SQ16763 222 aa15.29■□□□□ 0.04
TMEM248-203ENST00000418375 MCTP2Q6DN12 878 aa15.29■□□□□ 0.04
TMEM248-203ENST00000418375 FAM177A1Q8N128 213 aaPredicted RBP15.29■□□□□ 0.04
TMEM248-203ENST00000418375 BICD2Q8TD16 824 aa15.29■□□□□ 0.04
TMEM248-203ENST00000418375 SCFD2Q8WU76 684 aa15.29■□□□□ 0.04
TMEM248-203ENST00000418375 WASF1Q92558 559 aa15.29■□□□□ 0.04
TMEM248-203ENST00000418375 WDR11Q9BZH6 1224 aa15.29■□□□□ 0.04
TMEM248-203ENST00000418375 ZMYND12Q9H0C1 365 aa15.29■□□□□ 0.04
TMEM248-203ENST00000418375 PDGFCQ9NRA1 345 aa15.29■□□□□ 0.04
TMEM248-203ENST00000418375 LCTP09848 1927 aa15.28■□□□□ 0.04
TMEM248-203ENST00000418375 RBM47A0AV96 593 aaKnown RBP15.28■□□□□ 0.04
TMEM248-203ENST00000418375 STAM2O75886 525 aa15.28■□□□□ 0.04
TMEM248-203ENST00000418375 CTDNEP1O95476 244 aa15.28■□□□□ 0.04
TMEM248-203ENST00000418375 XBP1P17861 261 aa15.28■□□□□ 0.04
TMEM248-203ENST00000418375 NLRP5P59047 1200 aa15.28■□□□□ 0.04
TMEM248-203ENST00000418375 TLE2Q04725 743 aa15.28■□□□□ 0.04
TMEM248-203ENST00000418375 XRRA1Q6P2D8 792 aa15.28■□□□□ 0.04
TMEM248-203ENST00000418375 VSIG10LQ86VR7 867 aa15.28■□□□□ 0.04
TMEM248-203ENST00000418375 TSEN34Q9BSV6 310 aaKnown RBP15.28■□□□□ 0.04
TMEM248-203ENST00000418375 PDLIM7Q9NR12 457 aa15.28■□□□□ 0.04
TMEM248-203ENST00000418375 VPS54Q9P1Q0 977 aa15.28■□□□□ 0.04
TMEM248-203ENST00000418375 ORC3Q9UBD5 711 aaPredicted RBP15.28■□□□□ 0.04
TMEM248-203ENST00000418375 PCDHA6Q9UN73 950 aa15.28■□□□□ 0.04
TMEM248-203ENST00000418375 PCDHA8Q9Y5H6 950 aa15.28■□□□□ 0.04
TMEM248-203ENST00000418375 SYNRGQ9UMZ2 1314 aa15.27■□□□□ 0.04
TMEM248-203ENST00000418375 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.27■□□□□ 0.04
TMEM248-203ENST00000418375 A0A1W2PQ45 241 aaPredicted RBP15.27■□□□□ 0.04
TMEM248-203ENST00000418375 A0A1W2PQY0 241 aa15.27■□□□□ 0.04
TMEM248-203ENST00000418375 NKRFO15226 690 aaKnown RBP eCLIP15.27■□□□□ 0.04
TMEM248-203ENST00000418375 SMPD1P17405 629 aa15.27■□□□□ 0.04
TMEM248-203ENST00000418375 AP3B2Q13367 1082 aa15.27■□□□□ 0.04
TMEM248-203ENST00000418375 TTLL4Q14679 1199 aa15.27■□□□□ 0.04
TMEM248-203ENST00000418375 DUSP28Q4G0W2 176 aa15.27■□□□□ 0.04
TMEM248-203ENST00000418375 SEPT14Q6ZU15 432 aa15.27■□□□□ 0.04
TMEM248-203ENST00000418375 CCDC83Q8IWF9 413 aa15.27■□□□□ 0.04
TMEM248-203ENST00000418375 DEFB123Q8N688 67 aa15.27■□□□□ 0.04
TMEM248-203ENST00000418375 NSUN7Q8NE18 718 aaKnown RBP15.27■□□□□ 0.04
TMEM248-203ENST00000418375 IL31RAQ8NI17 732 aa15.27■□□□□ 0.04
TMEM248-203ENST00000418375 AP5M1Q9H0R1 490 aa15.27■□□□□ 0.04
TMEM248-203ENST00000418375 Q9Y3F1 56 aa15.27■□□□□ 0.04
TMEM248-203ENST00000418375 MCM3APO60318 1980 aa15.26■□□□□ 0.03
TMEM248-203ENST00000418375 MOXD2PA6NHM9 499 aa15.26■□□□□ 0.03
TMEM248-203ENST00000418375 CLK2P49760 499 aaKnown RBP15.26■□□□□ 0.03
TMEM248-203ENST00000418375 ACLYP53396 1101 aa15.26■□□□□ 0.03
TMEM248-203ENST00000418375 GJA9P57773 515 aa15.26■□□□□ 0.03
TMEM248-203ENST00000418375 GNPTABQ3T906 1256 aa15.26■□□□□ 0.03
TMEM248-203ENST00000418375 PCNX4Q63HM2 1172 aa15.26■□□□□ 0.03
TMEM248-203ENST00000418375 KCNV1Q6PIU1 500 aa15.26■□□□□ 0.03
TMEM248-203ENST00000418375 SH3RF1Q7Z6J0 888 aa15.26■□□□□ 0.03
TMEM248-203ENST00000418375 TLK2Q86UE8 772 aa15.26■□□□□ 0.03
TMEM248-203ENST00000418375 REXO1Q8N1G1 1221 aaKnown RBP15.26■□□□□ 0.03
TMEM248-203ENST00000418375 KLHDC9Q8NEP7 349 aa15.26■□□□□ 0.03
TMEM248-203ENST00000418375 BADQ92934 168 aa15.26■□□□□ 0.03
TMEM248-203ENST00000418375 LLPHQ9BRT6 129 aaKnown RBP15.26■□□□□ 0.03
TMEM248-203ENST00000418375 ANO3Q9BYT9 981 aa15.26■□□□□ 0.03
TMEM248-203ENST00000418375 UPF3AQ9H1J1 476 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms