RNA–Protein interactions for RNA: ENST00000418224.7

PMS1-206, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-206ENST00000418224 RCSD1Q6JBY9 416 aa19.28■□□□□ 0.68
PMS1-206ENST00000418224 ARFGAP2Q8N6H7 521 aa19.28■□□□□ 0.68
PMS1-206ENST00000418224 CUL5Q93034 780 aa19.28■□□□□ 0.68
PMS1-206ENST00000418224 SAAL1Q96ER3 474 aa19.28■□□□□ 0.68
PMS1-206ENST00000418224 TRIM47Q96LD4 638 aa19.28■□□□□ 0.68
PMS1-206ENST00000418224 MAGEC2Q9UBF1 373 aaPredicted RBP19.28■□□□□ 0.68
PMS1-206ENST00000418224 BUB1O43683 1085 aa19.27■□□□□ 0.68
PMS1-206ENST00000418224 MGRN1O60291 552 aa19.27■□□□□ 0.68
PMS1-206ENST00000418224 XRCC4Q13426 336 aa19.27■□□□□ 0.68
PMS1-206ENST00000418224 MEA1Q16626 185 aa19.27■□□□□ 0.68
PMS1-206ENST00000418224 FAM47AQ5JRC9 791 aa19.27■□□□□ 0.68
PMS1-206ENST00000418224 TIAM2Q8IVF5 1701 aa19.27■□□□□ 0.68
PMS1-206ENST00000418224 KRT12Q99456 494 aa19.27■□□□□ 0.68
PMS1-206ENST00000418224 MYH3P11055 1940 aa19.27■□□□□ 0.68
PMS1-206ENST00000418224 SLC4A8Q2Y0W8 1093 aa19.27■□□□□ 0.68
PMS1-206ENST00000418224 CASKIN2Q8WXE0 1202 aa19.27■□□□□ 0.68
PMS1-206ENST00000418224 RUBCNQ92622 972 aa19.27■□□□□ 0.68
PMS1-206ENST00000418224 NUP58Q9BVL2 599 aa19.27■□□□□ 0.68
PMS1-206ENST00000418224 PCDHA13Q9Y5I0 950 aa19.27■□□□□ 0.68
PMS1-206ENST00000418224 H7C1D1 291 aa19.27■□□□□ 0.67
PMS1-206ENST00000418224 GCOM1H8Y6P7 765 aaPredicted RBP19.27■□□□□ 0.67
PMS1-206ENST00000418224 ANP32DO95626 131 aa19.27■□□□□ 0.67
PMS1-206ENST00000418224 MYZAPP0CAP1 466 aa19.27■□□□□ 0.67
PMS1-206ENST00000418224 EVX2Q03828 476 aa19.27■□□□□ 0.67
PMS1-206ENST00000418224 ITIH3Q06033 890 aa19.27■□□□□ 0.67
PMS1-206ENST00000418224 CHRNDQ07001 517 aa19.27■□□□□ 0.67
PMS1-206ENST00000418224 CAPRIN2Q6IMN6 1127 aaKnown RBP19.27■□□□□ 0.67
PMS1-206ENST00000418224 SAMD1Q6SPF0 538 aaPredicted RBP19.27■□□□□ 0.67
PMS1-206ENST00000418224 ZNF662Q6ZS27 426 aa19.27■□□□□ 0.67
PMS1-206ENST00000418224 CCDC170Q8IYT3 715 aa19.27■□□□□ 0.67
PMS1-206ENST00000418224 SPDYE1Q8NFV5 336 aaPredicted RBP19.27■□□□□ 0.67
PMS1-206ENST00000418224 HOOK2Q96ED9 719 aa19.27■□□□□ 0.67
PMS1-206ENST00000418224 ALS2CR12Q96Q35 445 aa19.27■□□□□ 0.67
PMS1-206ENST00000418224 TSGA10Q9BZW7 698 aa19.27■□□□□ 0.67
PMS1-206ENST00000418224 YIPF3Q9GZM5 350 aa19.27■□□□□ 0.67
PMS1-206ENST00000418224 MYH2Q9UKX2 1941 aa19.27■□□□□ 0.67
PMS1-206ENST00000418224 TRAPPC3O43617 180 aa19.26■□□□□ 0.67
PMS1-206ENST00000418224 SNX1Q13596 522 aa19.26■□□□□ 0.67
PMS1-206ENST00000418224 BZW1Q7L1Q6 419 aaKnown RBP19.26■□□□□ 0.67
PMS1-206ENST00000418224 MAB21L3Q8N8X9 362 aa19.26■□□□□ 0.67
PMS1-206ENST00000418224 ZNF507Q8TCN5 953 aa19.26■□□□□ 0.67
PMS1-206ENST00000418224 WTIPA6NIX2 430 aaPredicted RBP19.26■□□□□ 0.67
PMS1-206ENST00000418224 PP2D1A8MPX8 630 aa19.26■□□□□ 0.67
PMS1-206ENST00000418224 CALM1P0DP23 149 aa19.26■□□□□ 0.67
PMS1-206ENST00000418224 CALM2P0DP24 149 aa19.26■□□□□ 0.67
PMS1-206ENST00000418224 CALM3P0DP25 149 aa19.26■□□□□ 0.67
PMS1-206ENST00000418224 SCG2P13521 617 aa19.26■□□□□ 0.67
PMS1-206ENST00000418224 ZNF34Q8IZ26 560 aa19.26■□□□□ 0.67
PMS1-206ENST00000418224 RASGRP4Q8TDF6 673 aa19.26■□□□□ 0.67
PMS1-206ENST00000418224 SH2D4AQ9H788 454 aa19.26■□□□□ 0.67
PMS1-206ENST00000418224 SLC39A2Q9NP94 309 aa19.26■□□□□ 0.67
PMS1-206ENST00000418224 CNTNAP5Q8WYK1 1306 aa19.26■□□□□ 0.67
PMS1-206ENST00000418224 USP17L12C9JPN9 530 aa19.25■□□□□ 0.67
PMS1-206ENST00000418224 USP17L21D6R901 530 aa19.25■□□□□ 0.67
PMS1-206ENST00000418224 ADCY2Q08462 1091 aa19.25■□□□□ 0.67
PMS1-206ENST00000418224 BYSLQ13895 437 aaKnown RBP19.25■□□□□ 0.67
PMS1-206ENST00000418224 EMC10Q5UCC4 262 aa19.25■□□□□ 0.67
PMS1-206ENST00000418224 GKAP1Q5VSY0 366 aaPredicted RBP19.25■□□□□ 0.67
PMS1-206ENST00000418224 BRINP3Q76B58 766 aa19.25■□□□□ 0.67
PMS1-206ENST00000418224 TBC1D1Q86TI0 1168 aaPredicted RBP19.25■□□□□ 0.67
PMS1-206ENST00000418224 RAPGEF5Q92565 580 aa19.25■□□□□ 0.67
PMS1-206ENST00000418224 SPAG5Q96R06 1193 aa19.25■□□□□ 0.67
PMS1-206ENST00000418224 TMBIM4Q9HC24 238 aa19.25■□□□□ 0.67
PMS1-206ENST00000418224 CPSF2Q9P2I0 782 aaKnown RBP19.25■□□□□ 0.67
PMS1-206ENST00000418224 TRPC6Q9Y210 931 aa19.25■□□□□ 0.67
PMS1-206ENST00000418224 A0A1W2PQC6 194 aa19.25■□□□□ 0.67
PMS1-206ENST00000418224 CCDC152Q4G0S7 254 aa19.25■□□□□ 0.67
PMS1-206ENST00000418224 C2CD5Q86YS7 1000 aa19.25■□□□□ 0.67
PMS1-206ENST00000418224 PYM1Q9BRP8 204 aaKnown RBP19.25■□□□□ 0.67
PMS1-206ENST00000418224 GDF3Q9NR23 364 aa19.25■□□□□ 0.67
PMS1-206ENST00000418224 ANAPC4Q9UJX5 808 aa19.25■□□□□ 0.67
PMS1-206ENST00000418224 MTMR7Q9Y216 660 aa19.25■□□□□ 0.67
PMS1-206ENST00000418224 RASSF10A6NK89 507 aa19.25■□□□□ 0.67
PMS1-206ENST00000418224 AKR1B10O60218 316 aa19.25■□□□□ 0.67
PMS1-206ENST00000418224 ZBED6P86452 979 aa19.25■□□□□ 0.67
PMS1-206ENST00000418224 CDC37Q16543 378 aaPredicted RBP19.25■□□□□ 0.67
PMS1-206ENST00000418224 CFAP221Q4G0U5 840 aa19.25■□□□□ 0.67
PMS1-206ENST00000418224 THEMIS2Q5TEJ8 643 aa19.25■□□□□ 0.67
PMS1-206ENST00000418224 PROCA1Q8NCQ7 364 aaPredicted RBP19.25■□□□□ 0.67
PMS1-206ENST00000418224 TATDN2Q93075 761 aa19.25■□□□□ 0.67
PMS1-206ENST00000418224 DNM2P50570 870 aa19.24■□□□□ 0.67
PMS1-206ENST00000418224 NBPF9Q3BBW0 867 aa19.24■□□□□ 0.67
PMS1-206ENST00000418224 ZNF572Q7Z3I7 529 aaPredicted RBP19.24■□□□□ 0.67
PMS1-206ENST00000418224 CD302Q8IX05 232 aa19.24■□□□□ 0.67
PMS1-206ENST00000418224 KLHL7Q8IXQ5 586 aa19.24■□□□□ 0.67
PMS1-206ENST00000418224 GPKOWQ92917 476 aaPredicted RBP eCLIP19.24■□□□□ 0.67
PMS1-206ENST00000418224 TUBGCP2Q9BSJ2 902 aa19.24■□□□□ 0.67
PMS1-206ENST00000418224 EXOC1Q9NV70 894 aa19.24■□□□□ 0.67
PMS1-206ENST00000418224 ETAA1Q9NY74 926 aa19.24■□□□□ 0.67
PMS1-206ENST00000418224 CNOT8Q9UFF9 292 aaKnown RBP19.24■□□□□ 0.67
PMS1-206ENST00000418224 UPP2O95045 317 aa19.24■□□□□ 0.67
PMS1-206ENST00000418224 TNFRSF8P28908 595 aa19.24■□□□□ 0.67
PMS1-206ENST00000418224 CCDC63Q8NA47 563 aa19.24■□□□□ 0.67
PMS1-206ENST00000418224 TLR10Q9BXR5 811 aa19.24■□□□□ 0.67
PMS1-206ENST00000418224 SALL4Q9UJQ4 1053 aa19.24■□□□□ 0.67
PMS1-206ENST00000418224 NOVA2Q9UNW9 492 aaKnown RBP19.24■□□□□ 0.67
PMS1-206ENST00000418224 ERVV-1B6SEH8 477 aa19.23■□□□□ 0.67
PMS1-206ENST00000418224 ADSSL1Q8N142 457 aa19.23■□□□□ 0.67
PMS1-206ENST00000418224 CCT6BQ92526 530 aa19.23■□□□□ 0.67
PMS1-206ENST00000418224 C15orf41Q9Y2V0 281 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms