RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 GPR27Q9NS67 375 aa5.64□□□□□ -1.51
HMGB3P23-201ENST00000414981 ARID1BQ8NFD5 2236 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P23-201ENST00000414981 BCL6P41182 706 aa5.63□□□□□ -1.51
HMGB3P23-201ENST00000414981 AFF3P51826 1226 aaKnown RBP5.63□□□□□ -1.51
HMGB3P23-201ENST00000414981 NSMFQ6X4W1 530 aa5.63□□□□□ -1.51
HMGB3P23-201ENST00000414981 TEX2Q8IWB9 1127 aa5.63□□□□□ -1.51
HMGB3P23-201ENST00000414981 SEC14L1Q92503 715 aa5.63□□□□□ -1.51
HMGB3P23-201ENST00000414981 TMEM169Q96HH4 297 aa5.63□□□□□ -1.51
HMGB3P23-201ENST00000414981 SPATA9Q9BWV2 254 aa5.63□□□□□ -1.51
HMGB3P23-201ENST00000414981 AP5M1Q9H0R1 490 aa5.63□□□□□ -1.51
HMGB3P23-201ENST00000414981 RXFP1Q9HBX9 757 aa5.63□□□□□ -1.51
HMGB3P23-201ENST00000414981 ARHGEF4Q9NR80 690 aa5.63□□□□□ -1.51
HMGB3P23-201ENST00000414981 TRAV20A0A0B4J274 112 aa5.62□□□□□ -1.51
HMGB3P23-201ENST00000414981 SGSM2O43147 1006 aa5.62□□□□□ -1.51
HMGB3P23-201ENST00000414981 PRODHO43272 600 aa5.62□□□□□ -1.51
HMGB3P23-201ENST00000414981 PABPC1P11940 636 aaKnown RBP5.62□□□□□ -1.51
HMGB3P23-201ENST00000414981 LCP1P13796 627 aa5.62□□□□□ -1.51
HMGB3P23-201ENST00000414981 B3GNT8Q7Z7M8 397 aa5.62□□□□□ -1.51
HMGB3P23-201ENST00000414981 DCAF4Q8WV16 495 aa5.62□□□□□ -1.51
HMGB3P23-201ENST00000414981 PWWP2AQ96N64 755 aa5.62□□□□□ -1.51
HMGB3P23-201ENST00000414981 PCDH18Q9HCL0 1135 aa5.62□□□□□ -1.51
HMGB3P23-201ENST00000414981 BTG4Q9NY30 223 aa5.62□□□□□ -1.51
HMGB3P23-201ENST00000414981 RAPGEFL1Q9UHV5 662 aa5.62□□□□□ -1.51
HMGB3P23-201ENST00000414981 PCDHA2Q9Y5H9 948 aa5.62□□□□□ -1.51
HMGB3P23-201ENST00000414981 PMLP29590 882 aa5.61□□□□□ -1.51
HMGB3P23-201ENST00000414981 CACNB2Q08289 660 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P23-201ENST00000414981 SF3A1Q15459 793 aaKnown RBP5.61□□□□□ -1.51
HMGB3P23-201ENST00000414981 CHRNA2Q15822 529 aa5.61□□□□□ -1.51
HMGB3P23-201ENST00000414981 LONRF2Q1L5Z9 754 aa5.61□□□□□ -1.51
HMGB3P23-201ENST00000414981 DPH6Q7L8W6 267 aa5.61□□□□□ -1.51
HMGB3P23-201ENST00000414981 SCUBE1Q8IWY4 988 aa5.61□□□□□ -1.51
HMGB3P23-201ENST00000414981 MARCH10Q8NA82 808 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P23-201ENST00000414981 OSBP2Q969R2 916 aa5.61□□□□□ -1.51
HMGB3P23-201ENST00000414981 MKL1Q969V6 931 aa5.61□□□□□ -1.51
HMGB3P23-201ENST00000414981 ZFYVE21Q9BQ24 234 aa5.61□□□□□ -1.51
HMGB3P23-201ENST00000414981 PLA2G2DQ9UNK4 145 aa5.61□□□□□ -1.51
HMGB3P23-201ENST00000414981 FAN1Q9Y2M0 1017 aa5.61□□□□□ -1.51
HMGB3P23-201ENST00000414981 COA3Q9Y2R0 106 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P23-201ENST00000414981 SIT1Q9Y3P8 196 aa5.61□□□□□ -1.51
HMGB3P23-201ENST00000414981 HGSO14964 777 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P23-201ENST00000414981 FPR2P25090 351 aa5.6□□□□□ -1.51
HMGB3P23-201ENST00000414981 HTRA3P83110 453 aa5.6□□□□□ -1.51
HMGB3P23-201ENST00000414981 SERINC3Q13530 473 aa5.6□□□□□ -1.51
HMGB3P23-201ENST00000414981 MTERF2Q49AM1 385 aa5.6□□□□□ -1.51
HMGB3P23-201ENST00000414981 SPATC1Q76KD6 591 aa5.6□□□□□ -1.51
HMGB3P23-201ENST00000414981 NLRP10Q86W26 655 aa5.6□□□□□ -1.51
HMGB3P23-201ENST00000414981 LINC01356Q8N9X3 169 aa5.6□□□□□ -1.51
HMGB3P23-201ENST00000414981 ZBTB38Q8NAP3 1195 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P23-201ENST00000414981 CHAMP1Q96JM3 812 aa5.6□□□□□ -1.51
HMGB3P23-201ENST00000414981 CDIP1Q9H305 208 aa5.6□□□□□ -1.51
HMGB3P23-201ENST00000414981 CLDND1Q9NY35 253 aa5.6□□□□□ -1.51
HMGB3P23-201ENST00000414981 TADA3O75528 432 aa5.59□□□□□ -1.51
HMGB3P23-201ENST00000414981 IFRD2Q12894 506 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P23-201ENST00000414981 TTLL10Q6ZVT0 673 aa5.59□□□□□ -1.51
HMGB3P23-201ENST00000414981 USP53Q70EK8 1073 aa5.59□□□□□ -1.51
HMGB3P23-201ENST00000414981 MILR1Q7Z6M3 343 aa5.59□□□□□ -1.51
HMGB3P23-201ENST00000414981 MIB1Q86YT6 1006 aa5.59□□□□□ -1.51
HMGB3P23-201ENST00000414981 FNIP1Q8TF40 1166 aa5.59□□□□□ -1.51
HMGB3P23-201ENST00000414981 BCAS3Q9H6U6 928 aa5.59□□□□□ -1.51
HMGB3P23-201ENST00000414981 NGRNQ9NPE2 291 aaKnown RBP5.59□□□□□ -1.51
HMGB3P23-201ENST00000414981 PALD1Q9ULE6 856 aa5.59□□□□□ -1.51
HMGB3P23-201ENST00000414981 ZNF652Q9Y2D9 606 aa5.59□□□□□ -1.51
HMGB3P23-201ENST00000414981 LOC105371045A0A1W2PR82 267 aa5.58□□□□□ -1.52
HMGB3P23-201ENST00000414981 ADCY3O60266 1144 aa5.58□□□□□ -1.52
HMGB3P23-201ENST00000414981 MSCO60682 206 aa5.58□□□□□ -1.52
HMGB3P23-201ENST00000414981 DGKIO75912 1065 aa5.58□□□□□ -1.52
HMGB3P23-201ENST00000414981 BMP7P18075 431 aa5.58□□□□□ -1.52
HMGB3P23-201ENST00000414981 LIMS1P48059 325 aa5.58□□□□□ -1.52
HMGB3P23-201ENST00000414981 NTRK3Q16288 839 aa5.58□□□□□ -1.52
HMGB3P23-201ENST00000414981 ZC3H12BQ5HYM0 836 aaKnown RBP5.58□□□□□ -1.52
HMGB3P23-201ENST00000414981 EMC4Q5J8M3 183 aa5.58□□□□□ -1.52
HMGB3P23-201ENST00000414981 STYK1Q6J9G0 422 aa5.58□□□□□ -1.52
HMGB3P23-201ENST00000414981 CYP4F22Q6NT55 531 aa5.58□□□□□ -1.52
HMGB3P23-201ENST00000414981 LBX2Q6XYB7 198 aa5.58□□□□□ -1.52
HMGB3P23-201ENST00000414981 ETV3LQ6ZN32 361 aa5.58□□□□□ -1.52
HMGB3P23-201ENST00000414981 SAPCD2Q86UD0 394 aa5.58□□□□□ -1.52
HMGB3P23-201ENST00000414981 IFNL3Q8IZI9 196 aa5.58□□□□□ -1.52
HMGB3P23-201ENST00000414981 LINC00482Q8N8I6 264 aa5.58□□□□□ -1.52
HMGB3P23-201ENST00000414981 TP53I13Q8NBR0 393 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P23-201ENST00000414981 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.58□□□□□ -1.52
HMGB3P23-201ENST00000414981 KCNC2Q96PR1 638 aa5.58□□□□□ -1.52
HMGB3P23-201ENST00000414981 PHF20Q9BVI0 1012 aa5.58□□□□□ -1.52
HMGB3P23-201ENST00000414981 EPB41L1Q9H4G0 881 aa5.58□□□□□ -1.52
HMGB3P23-201ENST00000414981 PARD6AQ9NPB6 346 aa5.58□□□□□ -1.52
HMGB3P23-201ENST00000414981 FBXL7Q9UJT9 491 aa5.58□□□□□ -1.52
HMGB3P23-201ENST00000414981 PMF1-BGLAPU3KQ54 211 aa5.58□□□□□ -1.52
HMGB3P23-201ENST00000414981 KRTAP4-8A0A0G2JLE6 195 aa5.57□□□□□ -1.52
HMGB3P23-201ENST00000414981 SH3D21A4FU49 640 aa5.57□□□□□ -1.52
HMGB3P23-201ENST00000414981 FFAR3O14843 346 aa5.57□□□□□ -1.52
HMGB3P23-201ENST00000414981 MAFKO60675 156 aa5.57□□□□□ -1.52
HMGB3P23-201ENST00000414981 PLA2G1BP04054 148 aaKnown RBP5.57□□□□□ -1.52
HMGB3P23-201ENST00000414981 MC3RP41968 323 aa5.57□□□□□ -1.52
HMGB3P23-201ENST00000414981 GPR85P60893 370 aa5.57□□□□□ -1.52
HMGB3P23-201ENST00000414981 SSRP1Q08945 709 aaKnown RBP5.57□□□□□ -1.52
HMGB3P23-201ENST00000414981 YOD1Q5VVQ6 348 aaPredicted RBP5.57□□□□□ -1.52
HMGB3P23-201ENST00000414981 STEAP3Q658P3 488 aa5.57□□□□□ -1.52
HMGB3P23-201ENST00000414981 FAM126BQ8IXS8 530 aa5.57□□□□□ -1.52
HMGB3P23-201ENST00000414981 SMARCC2Q8TAQ2 1214 aa5.57□□□□□ -1.52
HMGB3P23-201ENST00000414981 PHOSPHO1Q8TCT1 267 aa5.57□□□□□ -1.52
HMGB3P23-201ENST00000414981 IPO9Q96P70 1041 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms