RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 MYCLP12524 364 aaPredicted RBP18.1■□□□□ 0.49
MCF2L-211ENST00000413354 PSMA5P28066 241 aa18.1■□□□□ 0.49
MCF2L-211ENST00000413354 VSIG10LQ86VR7 867 aa18.1■□□□□ 0.49
MCF2L-211ENST00000413354 SMARCC2Q8TAQ2 1214 aa18.1■□□□□ 0.49
MCF2L-211ENST00000413354 COPS5Q92905 334 aa18.1■□□□□ 0.49
MCF2L-211ENST00000413354 TCEANC2Q96MN5 208 aa18.1■□□□□ 0.49
MCF2L-211ENST00000413354 JAKMIP1Q96N16 626 aaKnown RBP18.1■□□□□ 0.49
MCF2L-211ENST00000413354 SNX14Q9Y5W7 946 aa18.1■□□□□ 0.49
MCF2L-211ENST00000413354 KLF18A0A0U1RQI7 1052 aa18.09■□□□□ 0.49
MCF2L-211ENST00000413354 GOLGA8AA7E2F4 631 aa18.09■□□□□ 0.49
MCF2L-211ENST00000413354 GOLGA8BA8MQT2 603 aa18.09■□□□□ 0.49
MCF2L-211ENST00000413354 PIK3CDO00329 1044 aa18.09■□□□□ 0.49
MCF2L-211ENST00000413354 STAM2O75886 525 aa18.09■□□□□ 0.49
MCF2L-211ENST00000413354 TIMP1P01033 207 aa18.09■□□□□ 0.49
MCF2L-211ENST00000413354 PCDH10Q9P2E7 1040 aa18.09■□□□□ 0.49
MCF2L-211ENST00000413354 CNTNAP5Q8WYK1 1306 aa18.08■□□□□ 0.49
MCF2L-211ENST00000413354 CCDC196A0A1B0GTZ2 297 aa18.08■□□□□ 0.48
MCF2L-211ENST00000413354 CD4P01730 458 aa18.08■□□□□ 0.48
MCF2L-211ENST00000413354 FPGSQ05932 587 aa18.08■□□□□ 0.48
MCF2L-211ENST00000413354 ARHGAP1Q07960 439 aa18.08■□□□□ 0.48
MCF2L-211ENST00000413354 LY6KQ17RY6 165 aa18.08■□□□□ 0.48
MCF2L-211ENST00000413354 GNPTABQ3T906 1256 aa18.08■□□□□ 0.48
MCF2L-211ENST00000413354 GPR153Q6NV75 609 aa18.08■□□□□ 0.48
MCF2L-211ENST00000413354 CMTR1Q8N1G2 835 aaKnown RBP18.08■□□□□ 0.48
MCF2L-211ENST00000413354 EMID1Q96A84 441 aaPredicted RBP18.08■□□□□ 0.48
MCF2L-211ENST00000413354 DDX41Q9UJV9 622 aaKnown RBP18.08■□□□□ 0.48
MCF2L-211ENST00000413354 BRPF3Q9ULD4 1205 aa18.08■□□□□ 0.48
MCF2L-211ENST00000413354 GRIN2DO15399 1336 aa18.07■□□□□ 0.48
MCF2L-211ENST00000413354 hCG_1984214I3L0E3 225 aa18.07■□□□□ 0.48
MCF2L-211ENST00000413354 MMP3P08254 477 aa18.07■□□□□ 0.48
MCF2L-211ENST00000413354 TGFB3P10600 412 aa18.07■□□□□ 0.48
MCF2L-211ENST00000413354 PSMC6P62333 389 aa18.07■□□□□ 0.48
MCF2L-211ENST00000413354 PPIGQ13427 754 aaKnown RBP eCLIP18.07■□□□□ 0.486e-8■■■□□ 14.8
MCF2L-211ENST00000413354 LAMC2Q13753 1193 aa18.07■□□□□ 0.48
MCF2L-211ENST00000413354 XRRA1Q6P2D8 792 aa18.07■□□□□ 0.48
MCF2L-211ENST00000413354 TEX2Q8IWB9 1127 aa18.07■□□□□ 0.48
MCF2L-211ENST00000413354 CCDC82Q8N4S0 544 aa18.07■□□□□ 0.48
MCF2L-211ENST00000413354 ZNF713Q8N859 430 aaPredicted RBP18.07■□□□□ 0.48
MCF2L-211ENST00000413354 IL31RAQ8NI17 732 aa18.07■□□□□ 0.48
MCF2L-211ENST00000413354 AFG1LQ8WV93 481 aa18.07■□□□□ 0.48
MCF2L-211ENST00000413354 PSTPIP2Q9H939 334 aa18.07■□□□□ 0.48
MCF2L-211ENST00000413354 NAP1L2Q9ULW6 460 aaPredicted RBP18.07■□□□□ 0.48
MCF2L-211ENST00000413354 SOX1O00570 391 aaPredicted RBP18.06■□□□□ 0.48
MCF2L-211ENST00000413354 SUPT20HL2P0C7V6 817 aa18.06■□□□□ 0.48
MCF2L-211ENST00000413354 RPS6KB1P23443 525 aa18.06■□□□□ 0.48
MCF2L-211ENST00000413354 ITGB8P26012 769 aa18.06■□□□□ 0.48
MCF2L-211ENST00000413354 METAP2P50579 478 aaKnown RBP eCLIP18.06■□□□□ 0.48
MCF2L-211ENST00000413354 DGKDQ16760 1214 aa18.06■□□□□ 0.48
MCF2L-211ENST00000413354 MFSD5Q6N075 450 aa18.06■□□□□ 0.48
MCF2L-211ENST00000413354 PPP1R18Q6NYC8 613 aa18.06■□□□□ 0.48
MCF2L-211ENST00000413354 NFRKBQ6P4R8 1299 aa18.06■□□□□ 0.48
MCF2L-211ENST00000413354 Q6ZUG5 572 aa18.06■□□□□ 0.48
MCF2L-211ENST00000413354 HEATR3Q7Z4Q2 680 aa18.06■□□□□ 0.48
MCF2L-211ENST00000413354 DHX37Q8IY37 1157 aaKnown RBP18.06■□□□□ 0.48
MCF2L-211ENST00000413354 FBXL16Q8N461 479 aa18.06■□□□□ 0.48
MCF2L-211ENST00000413354 TMEM199Q8N511 208 aa18.06■□□□□ 0.48
MCF2L-211ENST00000413354 PPTC7Q8NI37 304 aa18.06■□□□□ 0.48
MCF2L-211ENST00000413354 ALDH8A1Q9H2A2 487 aaPredicted RBP18.06■□□□□ 0.48
MCF2L-211ENST00000413354 MEIS2O14770 477 aa18.05■□□□□ 0.48
MCF2L-211ENST00000413354 B4GALT4O60513 344 aa18.05■□□□□ 0.48
MCF2L-211ENST00000413354 RGS20O76081 388 aa18.05■□□□□ 0.48
MCF2L-211ENST00000413354 CASTP20810 708 aaKnown RBP18.05■□□□□ 0.48
MCF2L-211ENST00000413354 PTPN11Q06124 597 aaPredicted RBP18.05■□□□□ 0.48
MCF2L-211ENST00000413354 USP17L6PQ6QN14 398 aa18.05■□□□□ 0.48
MCF2L-211ENST00000413354 BRF1Q92994 677 aa18.05■□□□□ 0.48
MCF2L-211ENST00000413354 LRCH3Q96II8 777 aa18.05■□□□□ 0.48
MCF2L-211ENST00000413354 KATNAL1Q9BW62 490 aa18.05■□□□□ 0.48
MCF2L-211ENST00000413354 HIPK3Q9H422 1215 aa18.05■□□□□ 0.48
MCF2L-211ENST00000413354 EHMT1Q9H9B1 1298 aa18.05■□□□□ 0.48
MCF2L-211ENST00000413354 NID2Q14112 1375 aa18.04■□□□□ 0.48
MCF2L-211ENST00000413354 DOCK5Q9H7D0 1870 aa18.04■□□□□ 0.48
MCF2L-211ENST00000413354 hCG_1642624A0A1W2PR95 340 aa18.04■□□□□ 0.48
MCF2L-211ENST00000413354 SPDYE3A6NKU9 549 aa18.04■□□□□ 0.48
MCF2L-211ENST00000413354 CPA1P15085 419 aa18.04■□□□□ 0.48
MCF2L-211ENST00000413354 UBA1P22314 1058 aaKnown RBP18.04■□□□□ 0.48
MCF2L-211ENST00000413354 SHHQ15465 462 aa18.04■□□□□ 0.48
MCF2L-211ENST00000413354 NBPF20Q3BBV1 942 aa18.04■□□□□ 0.48
MCF2L-211ENST00000413354 FAM47CQ5HY64 1035 aa18.04■□□□□ 0.48
MCF2L-211ENST00000413354 PCNX4Q63HM2 1172 aa18.04■□□□□ 0.48
MCF2L-211ENST00000413354 INPP4AQ96PE3 977 aaPredicted RBP18.04■□□□□ 0.48
MCF2L-211ENST00000413354 AGXT2Q9BYV1 514 aa18.04■□□□□ 0.48
MCF2L-211ENST00000413354 PPP1R12CQ9BZL4 782 aa18.04■□□□□ 0.48
MCF2L-211ENST00000413354 GLT8D2Q9H1C3 349 aa18.04■□□□□ 0.48
MCF2L-211ENST00000413354 FIBPO43427 364 aa18.03■□□□□ 0.48
MCF2L-211ENST00000413354 EIF5BO60841 1220 aaKnown RBP18.03■□□□□ 0.48
MCF2L-211ENST00000413354 GGPS1O95749 300 aa18.03■□□□□ 0.48
MCF2L-211ENST00000413354 ICAM3P32942 547 aa18.03■□□□□ 0.48
MCF2L-211ENST00000413354 NAPAP54920 295 aa18.03■□□□□ 0.48
MCF2L-211ENST00000413354 APOBRQ0VD83 1088 aa18.03■□□□□ 0.48
MCF2L-211ENST00000413354 FUT2Q10981 343 aa18.03■□□□□ 0.48
MCF2L-211ENST00000413354 C9orf50Q5SZB4 431 aa18.03■□□□□ 0.48
MCF2L-211ENST00000413354 CELF3Q5SZQ8 465 aaKnown RBP18.03■□□□□ 0.48
MCF2L-211ENST00000413354 WWC2Q6AWC2 1192 aa18.03■□□□□ 0.48
MCF2L-211ENST00000413354 NLRX1Q86UT6 975 aa18.03■□□□□ 0.48
MCF2L-211ENST00000413354 GPKOWQ92917 476 aaPredicted RBP eCLIP18.03■□□□□ 0.48
MCF2L-211ENST00000413354 RNPC3Q96LT9 517 aaKnown RBP18.03■□□□□ 0.48
MCF2L-211ENST00000413354 TRPV6Q9H1D0 765 aa18.03■□□□□ 0.48
MCF2L-211ENST00000413354 TANC1Q9C0D5 1861 aa18.03■□□□□ 0.48
MCF2L-211ENST00000413354 LAMA3Q16787 3333 aa18.03■□□□□ 0.48
MCF2L-211ENST00000413354 HOXD8P13378 290 aaPredicted RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms