RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 RTEL1Q9NZ71 1219 aa8.87□□□□□ -0.99
CPSF4-202ENST00000412686 PCDH10Q9P2E7 1040 aa8.87□□□□□ -0.99
CPSF4-202ENST00000412686 FAM184BQ9ULE4 1060 aa8.87□□□□□ -0.99
CPSF4-202ENST00000412686 ALPK3Q96L96 1907 aa8.87□□□□□ -0.99
CPSF4-202ENST00000412686 DOCK5Q9H7D0 1870 aa8.86□□□□□ -0.99
CPSF4-202ENST00000412686 CTAGE5O15320 804 aa8.86□□□□□ -0.99
CPSF4-202ENST00000412686 SORBS3O60504 671 aa8.86□□□□□ -0.99
CPSF4-202ENST00000412686 MSCO60682 206 aa8.86□□□□□ -0.99
CPSF4-202ENST00000412686 RGS20O76081 388 aa8.86□□□□□ -0.99
CPSF4-202ENST00000412686 DEXIO95424 95 aa8.86□□□□□ -0.99
CPSF4-202ENST00000412686 FDPSP14324 419 aaKnown RBP8.86□□□□□ -0.99
CPSF4-202ENST00000412686 ADCY7P51828 1080 aa8.86□□□□□ -0.99
CPSF4-202ENST00000412686 MRPS9P82933 396 aaKnown RBP8.86□□□□□ -0.99
CPSF4-202ENST00000412686 BEX3Q00994 111 aa8.86□□□□□ -0.99
CPSF4-202ENST00000412686 TNFAIP2Q03169 654 aa8.86□□□□□ -0.99
CPSF4-202ENST00000412686 LRRC41Q15345 812 aa8.86□□□□□ -0.99
CPSF4-202ENST00000412686 JAKMIP3Q5VZ66 844 aa8.86□□□□□ -0.99
CPSF4-202ENST00000412686 PPP1R18Q6NYC8 613 aa8.86□□□□□ -0.99
CPSF4-202ENST00000412686 TRIM22Q8IYM9 498 aa8.86□□□□□ -0.99
CPSF4-202ENST00000412686 CUL5Q93034 780 aa8.86□□□□□ -0.99
CPSF4-202ENST00000412686 KIF12Q96FN5 646 aa8.86□□□□□ -0.99
CPSF4-202ENST00000412686 WDR11Q9BZH6 1224 aa8.86□□□□□ -0.99
CPSF4-202ENST00000412686 RIC8AQ9NPQ8 531 aa8.86□□□□□ -0.99
CPSF4-202ENST00000412686 MAP3K20Q9NYL2 800 aaKnown RBP8.86□□□□□ -0.99
CPSF4-202ENST00000412686 PCDHA6Q9UN73 950 aa8.86□□□□□ -0.99
CPSF4-202ENST00000412686 LIMCH1Q9UPQ0 1083 aa8.86□□□□□ -0.99
CPSF4-202ENST00000412686 GNEQ9Y223 722 aaKnown RBP8.86□□□□□ -0.99
CPSF4-202ENST00000412686 PCDHA8Q9Y5H6 950 aa8.86□□□□□ -0.99
CPSF4-202ENST00000412686 BRCA2P51587 3418 aa8.86□□□□□ -0.99
CPSF4-202ENST00000412686 STK36Q9NRP7 1315 aa8.85□□□□□ -0.99
CPSF4-202ENST00000412686 LOC102724159A0A0B4J2E5 919 aa8.85□□□□□ -0.99
CPSF4-202ENST00000412686 RBM47A0AV96 593 aaKnown RBP8.85□□□□□ -0.99
CPSF4-202ENST00000412686 hCG_1984214I3L0E3 225 aa8.85□□□□□ -0.99
CPSF4-202ENST00000412686 DYNC1LI2O43237 492 aaPredicted RBP8.85□□□□□ -0.99
CPSF4-202ENST00000412686 DUSP11O75319 330 aaKnown RBP8.85□□□□□ -0.99
CPSF4-202ENST00000412686 C6orf222P0C671 652 aaPredicted RBP8.85□□□□□ -0.99
CPSF4-202ENST00000412686 CCND2P30279 289 aa8.85□□□□□ -0.99
CPSF4-202ENST00000412686 CLK2P49760 499 aaKnown RBP8.85□□□□□ -0.99
CPSF4-202ENST00000412686 SEMA3FQ13275 785 aa8.85□□□□□ -0.99
CPSF4-202ENST00000412686 PWP2Q15269 919 aaKnown RBP8.85□□□□□ -0.99
CPSF4-202ENST00000412686 NPY5RQ15761 445 aa8.85□□□□□ -0.99
CPSF4-202ENST00000412686 STXBP2Q15833 593 aa8.85□□□□□ -0.99
CPSF4-202ENST00000412686 LY6KQ17RY6 165 aa8.85□□□□□ -0.99
CPSF4-202ENST00000412686 CPLX2Q6PUV4 134 aaKnown RBP8.85□□□□□ -0.99
CPSF4-202ENST00000412686 TLK2Q86UE8 772 aa8.85□□□□□ -0.99
CPSF4-202ENST00000412686 VSIG10LQ86VR7 867 aa8.85□□□□□ -0.99
CPSF4-202ENST00000412686 SAMD3Q8N6K7 520 aa8.85□□□□□ -0.99
CPSF4-202ENST00000412686 ZNF713Q8N859 430 aaPredicted RBP8.85□□□□□ -0.99
CPSF4-202ENST00000412686 FERMT2Q96AC1 680 aa8.85□□□□□ -0.99
CPSF4-202ENST00000412686 IWS1Q96ST2 819 aa8.85□□□□□ -0.99
CPSF4-202ENST00000412686 MPHOSPH6Q99547 160 aaKnown RBP8.85□□□□□ -0.99
CPSF4-202ENST00000412686 ANO3Q9BYT9 981 aa8.85□□□□□ -0.99
CPSF4-202ENST00000412686 MAF1Q9H063 256 aa8.85□□□□□ -0.99
CPSF4-202ENST00000412686 ZMYND12Q9H0C1 365 aa8.85□□□□□ -0.99
CPSF4-202ENST00000412686 C11orf49Q9H6J7 331 aa8.85□□□□□ -0.99
CPSF4-202ENST00000412686 RBM27Q9P2N5 1060 aaKnown RBP8.85□□□□□ -0.99
CPSF4-202ENST00000412686 ORC3Q9UBD5 711 aaPredicted RBP8.85□□□□□ -0.99
CPSF4-202ENST00000412686 KCNJ14Q9UNX9 436 aa8.85□□□□□ -0.99
CPSF4-202ENST00000412686 MYH7BA7E2Y1 1941 aa8.84□□□□□ -0.99
CPSF4-202ENST00000412686 ESYT2A0FGR8 921 aa8.84□□□□□ -0.99
CPSF4-202ENST00000412686 SPDYE3A6NKU9 549 aa8.84□□□□□ -0.99
CPSF4-202ENST00000412686 DNM1LO00429 736 aa8.84□□□□□ -0.99
CPSF4-202ENST00000412686 EIF3JO75822 258 aaKnown RBP8.84□□□□□ -0.99
CPSF4-202ENST00000412686 CDKL5O76039 1030 aa8.84□□□□□ -0.99
CPSF4-202ENST00000412686 TXNP10599 105 aaKnown RBP8.84□□□□□ -0.99
CPSF4-202ENST00000412686 COL6A1P12109 1028 aa8.84□□□□□ -0.99
CPSF4-202ENST00000412686 MRPL12P52815 198 aaKnown RBP8.84□□□□□ -0.99
CPSF4-202ENST00000412686 NLRP5P59047 1200 aa8.84□□□□□ -0.99
CPSF4-202ENST00000412686 MLLT1Q03111 559 aaPredicted RBP8.84□□□□□ -0.99
CPSF4-202ENST00000412686 DUSP28Q4G0W2 176 aa8.84□□□□□ -0.99
CPSF4-202ENST00000412686 IQSEC1Q6DN90 963 aa8.84□□□□□ -0.99
CPSF4-202ENST00000412686 CCDC62Q6P9F0 684 aa8.84□□□□□ -0.99
CPSF4-202ENST00000412686 NECAB2Q7Z6G3 386 aa8.84□□□□□ -0.99
CPSF4-202ENST00000412686 ANKLE1Q8NAG6 615 aa8.84□□□□□ -0.99
CPSF4-202ENST00000412686 KLHDC9Q8NEP7 349 aa8.84□□□□□ -0.99
CPSF4-202ENST00000412686 OR6J1Q8NGC5 347 aa8.84□□□□□ -0.99
CPSF4-202ENST00000412686 CYP2W1Q8TAV3 490 aa8.84□□□□□ -0.99
CPSF4-202ENST00000412686 SCFD2Q8WU76 684 aa8.84□□□□□ -0.99
CPSF4-202ENST00000412686 ALG1Q9BT22 464 aa8.84□□□□□ -0.99
CPSF4-202ENST00000412686 UPF3AQ9H1J1 476 aaKnown RBP8.84□□□□□ -0.99
CPSF4-202ENST00000412686 BCAS3Q9H6U6 928 aa8.84□□□□□ -0.99
CPSF4-202ENST00000412686 DDX41Q9UJV9 622 aaKnown RBP8.84□□□□□ -0.99
CPSF4-202ENST00000412686 TELO2Q9Y4R8 837 aa8.84□□□□□ -0.99
CPSF4-202ENST00000412686 MRVI1Q9Y6F6 885 aa8.84□□□□□ -0.99
CPSF4-202ENST00000412686 B4DLN1 442 aa8.83□□□□□ -1
CPSF4-202ENST00000412686 M0R2N6 131 aa8.83□□□□□ -1
CPSF4-202ENST00000412686 ST18O60284 1047 aa8.83□□□□□ -1
CPSF4-202ENST00000412686 PYGBP11216 843 aa8.83□□□□□ -1
CPSF4-202ENST00000412686 ITGB5P18084 799 aa8.83□□□□□ -1
CPSF4-202ENST00000412686 ATN1P54259 1190 aaPredicted RBP8.83□□□□□ -1
CPSF4-202ENST00000412686 GJA9P57773 515 aa8.83□□□□□ -1
CPSF4-202ENST00000412686 SP2Q02086 613 aa8.83□□□□□ -1
CPSF4-202ENST00000412686 TTLL4Q14679 1199 aa8.83□□□□□ -1
CPSF4-202ENST00000412686 KCNA10Q16322 511 aa8.83□□□□□ -1
CPSF4-202ENST00000412686 PCNX4Q63HM2 1172 aa8.83□□□□□ -1
CPSF4-202ENST00000412686 CCSAPQ6IQ19 270 aaPredicted RBP8.83□□□□□ -1
CPSF4-202ENST00000412686 REXO1Q8N1G1 1221 aaKnown RBP8.83□□□□□ -1
CPSF4-202ENST00000412686 ARRDC4Q8NCT1 418 aa8.83□□□□□ -1
CPSF4-202ENST00000412686 CCDC148Q8NFR7 591 aa8.83□□□□□ -1
CPSF4-202ENST00000412686 OXER1Q8TDS5 423 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms