RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 CNOT8Q9UFF9 292 aaKnown RBP6.42□□□□□ -1.38
R3HDM1-202ENST00000409478 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 ZSCAN5CA6NGD5 496 aaPredicted RBP6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 NCK2O43639 380 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 COQ9O75208 318 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 MYL1P05976 194 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 ALDH3A1P30838 453 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 MAGEA1P43355 309 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 TIMM10P62072 90 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 MXRA7P84157 204 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 RTN1Q16799 776 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 SGSM1Q2NKQ1 1148 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 TBC1D10CQ8IV04 446 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 USHBP1Q8N6Y0 703 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 UBLCP1Q8WVY7 318 aaPredicted RBP6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 BICD1Q96G01 975 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 KRT23Q9C075 422 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 INCENPQ9NQS7 918 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 LMTK3Q96Q04 1460 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 USP54Q70EL1 1684 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 BICDL2A1A5D9 508 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 PDLIM1O00151 329 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 RAD51CO43502 376 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 GUCY1A2P33402 732 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 KRT2P35908 639 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 DYNC1I2Q13409 638 aaKnown RBP6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 TYW1BQ6NUM6 668 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 MPRIPQ6WCQ1 1025 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 KRT26Q7Z3Y9 468 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 SPATA21Q7Z572 469 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 ARHGAP22Q7Z5H3 698 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 APBB1IPQ7Z5R6 666 aaPredicted RBP6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 MS4A14Q96JA4 679 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 ZNF317Q96PQ6 595 aaPredicted RBP6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 PUS7LQ9H0K6 701 aaKnown RBP6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 RAB17Q9H0T7 212 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 SPDYE3A6NKU9 549 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 B4E1Z4 1266 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 CIAO1O76071 339 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 GBP1P32455 592 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 ALDH5A1P51649 535 aaPredicted RBP6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 UAP1Q16222 522 aaPredicted RBP6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 GNPTABQ3T906 1256 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 ANKRD13DQ6ZTN6 518 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 C2CD5Q86YS7 1000 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 B4GALNT2Q8NHY0 566 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 XAGE3Q8WTP9 111 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 TLCD1Q96CP7 247 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 DHTKD1Q96HY7 919 aaPredicted RBP6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 GORASP1Q9BQQ3 440 aa6.41□□□□□ -1.38
R3HDM1-202ENST00000409478 TRIM49BA6NDI0 452 aa6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 EVI5O60447 810 aa6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 PPFIA2O75334 1257 aa6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 KIF4AO95239 1232 aa6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 ARID4AP29374 1257 aaPredicted RBP6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 PPP1R2P41236 205 aa6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 RBM5P52756 815 aaKnown RBP eCLIP6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 CUL3Q13618 768 aa6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 KRT71Q3SY84 523 aa6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 FAM133BQ5BKY9 247 aaKnown RBP6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 LMBR1LQ6UX01 489 aa6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 ZSCAN29Q8IWY8 852 aaPredicted RBP6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 HOMEZQ8IX15 550 aa6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 CRACR2BQ8N4Y2 399 aaPredicted RBP6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 USP38Q8NB14 1042 aa6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 OR2W6PQ8NHA6 318 aa6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 FAM81AQ8TBF8 368 aa6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 FBF1Q8TES7 1133 aa6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 MYL10Q9BUA6 226 aa6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 CCDC134Q9H6E4 229 aa6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 CNNM2Q9H8M5 875 aa6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 ARHGAP20Q9P2F6 1191 aa6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 CTNNAL1Q9UBT7 734 aa6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 GDAQ9Y2T3 454 aa6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 A0A087WZG4 1122 aa6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 PRAMEF22A3QJZ6 481 aa6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 UBE2Q2LH0YL09 131 aa6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 MMEP08473 750 aa6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 ECHS1P30084 290 aa6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 EIF4A3P38919 411 aaKnown RBP6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 ABL2P42684 1182 aa6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 NCALDP61601 193 aa6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 ATP2C1P98194 919 aaPredicted RBP6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 LRRC23Q53EV4 343 aaPredicted RBP6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 TEKT4Q8WW24 435 aa6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 STAMQ92783 540 aa6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 NOC4LQ9BVI4 516 aaKnown RBP6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 TRIM4Q9C037 500 aa6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 ECT2Q9H8V3 914 aa6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 TMEM59LQ9UK28 342 aa6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 RPS6KL1Q9Y6S9 549 aa6.4□□□□□ -1.38
R3HDM1-202ENST00000409478 ARHGAP23Q9P227 1491 aa6.4□□□□□ -1.39
R3HDM1-202ENST00000409478 GPR75-ASB3A0A0A6YYF3 556 aa6.4□□□□□ -1.39
R3HDM1-202ENST00000409478 SSU72P8A0A1W2PR75 194 aa6.4□□□□□ -1.39
R3HDM1-202ENST00000409478 EYA2O00167 538 aa6.4□□□□□ -1.39
R3HDM1-202ENST00000409478 BACH1O14867 736 aa6.4□□□□□ -1.39
R3HDM1-202ENST00000409478 SART1O43290 800 aaKnown RBP6.4□□□□□ -1.39
R3HDM1-202ENST00000409478 HIP1RO75146 1068 aa6.4□□□□□ -1.39
R3HDM1-202ENST00000409478 RNF8O76064 485 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms