RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 LACTB2Q53H82 288 aaPredicted RBP10.84□□□□□ -0.67
PTPRM-203ENST00000400060 SPDYCQ5MJ68 293 aa10.84□□□□□ -0.67
PTPRM-203ENST00000400060 FAM43BQ6ZT52 329 aaPredicted RBP10.84□□□□□ -0.67
PTPRM-203ENST00000400060 SV2BQ7L1I2 683 aa10.84□□□□□ -0.67
PTPRM-203ENST00000400060 AENQ8WTP8 325 aaKnown RBP10.84□□□□□ -0.67
PTPRM-203ENST00000400060 C10orf88Q9H8K7 445 aa10.84□□□□□ -0.67
PTPRM-203ENST00000400060 ZNF711Q9Y462 761 aa10.84□□□□□ -0.67
PTPRM-203ENST00000400060 MOCS3O95396 460 aa10.84□□□□□ -0.67
PTPRM-203ENST00000400060 RPN1P04843 607 aaKnown RBP10.84□□□□□ -0.67
PTPRM-203ENST00000400060 SNRPA1P09661 255 aaKnown RBP10.84□□□□□ -0.67
PTPRM-203ENST00000400060 RPL13P26373 211 aaKnown RBP10.84□□□□□ -0.67
PTPRM-203ENST00000400060 IFIT5Q13325 482 aaKnown RBP10.84□□□□□ -0.67
PTPRM-203ENST00000400060 ZFAND2BQ8WV99 257 aa10.84□□□□□ -0.67
PTPRM-203ENST00000400060 WDR37Q9Y2I8 494 aa10.84□□□□□ -0.67
PTPRM-203ENST00000400060 SHROOM2Q13796 1616 aa10.84□□□□□ -0.67
PTPRM-203ENST00000400060 IGF2BP3O00425 579 aaKnown RBP eCLIP10.84□□□□□ -0.67
PTPRM-203ENST00000400060 NPTXRO95502 500 aa10.84□□□□□ -0.67
PTPRM-203ENST00000400060 KRT15P19012 456 aa10.84□□□□□ -0.67
PTPRM-203ENST00000400060 PITPNM3Q9BZ71 974 aa10.84□□□□□ -0.67
PTPRM-203ENST00000400060 TRIM31Q9BZY9 425 aa10.84□□□□□ -0.67
PTPRM-203ENST00000400060 MMADHCQ9H3L0 296 aaPredicted RBP10.84□□□□□ -0.67
PTPRM-203ENST00000400060 SCHIP1Q9P0W5 487 aaPredicted RBP10.84□□□□□ -0.67
PTPRM-203ENST00000400060 EPS15L1Q9UBC2 864 aa10.84□□□□□ -0.67
PTPRM-203ENST00000400060 DDX20Q9UHI6 824 aaKnown RBP10.84□□□□□ -0.67
PTPRM-203ENST00000400060 KDRP35968 1356 aa10.84□□□□□ -0.67
PTPRM-203ENST00000400060 UNC5CLQ8IV45 518 aa10.84□□□□□ -0.67
PTPRM-203ENST00000400060 CCDC105Q8IYK2 499 aa10.84□□□□□ -0.67
PTPRM-203ENST00000400060 NOA1Q8NC60 698 aaKnown RBP10.84□□□□□ -0.67
PTPRM-203ENST00000400060 ZNF280CQ8ND82 737 aa10.84□□□□□ -0.67
PTPRM-203ENST00000400060 DDI1Q8WTU0 396 aa10.84□□□□□ -0.67
PTPRM-203ENST00000400060 CENPTQ96BT3 561 aa10.84□□□□□ -0.67
PTPRM-203ENST00000400060 ATP8A1Q9Y2Q0 1164 aa10.84□□□□□ -0.67
PTPRM-203ENST00000400060 MCF2LO15068 1137 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 TMED8Q6PL24 325 aaPredicted RBP10.83□□□□□ -0.68
PTPRM-203ENST00000400060 GSTA5Q7RTV2 222 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 KRT28Q7Z3Y7 464 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 PARD3BQ8TEW8 1205 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 KIFAP3Q92845 792 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 NAP1L4Q99733 375 aaKnown RBP10.83□□□□□ -0.68
PTPRM-203ENST00000400060 TUBGCP2Q9BSJ2 902 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 EDEM3Q9BZQ6 932 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 ATP6V0A2Q9Y487 856 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 SRPRBQ9Y5M8 271 aaKnown RBP10.83□□□□□ -0.68
PTPRM-203ENST00000400060 IQGAP3Q86VI3 1631 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 PTCD1O75127 700 aaKnown RBP10.83□□□□□ -0.68
PTPRM-203ENST00000400060 ZNF189O75820 626 aaPredicted RBP10.83□□□□□ -0.68
PTPRM-203ENST00000400060 SERPING1P05155 500 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 VCAM1P19320 739 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 SERPINB3P29508 390 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 KIF11P52732 1056 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 XRCC4Q13426 336 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 ANO5Q75V66 913 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 NLRP7Q8WX94 980 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 TSNARE1Q96NA8 513 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 DPH5Q9H2P9 285 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 DCLRE1BQ9H816 532 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 TCEAL9Q9UHQ7 104 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 CAPN11Q9UMQ6 739 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 SH3BP1Q9Y3L3 701 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 SH3TC1Q8TE82 1336 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 MYO5CQ9NQX4 1742 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 RAD21O60216 631 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 LONP1P36776 959 aaKnown RBP10.83□□□□□ -0.68
PTPRM-203ENST00000400060 IGHMBP2P38935 993 aaKnown RBP10.83□□□□□ -0.68
PTPRM-203ENST00000400060 PHEXP78562 749 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 CAV1Q03135 178 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 POLA2Q14181 598 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 ANKRD13DQ6ZTN6 518 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 LRRN4CLQ8ND94 238 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 RIN2Q8WYP3 895 aaPredicted RBP10.83□□□□□ -0.68
PTPRM-203ENST00000400060 KCNB2Q92953 911 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 DYDC2Q96IM9 177 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 EYA1Q99502 592 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 LRRC1Q9BTT6 524 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 UNC45AQ9H3U1 944 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 TMOD3Q9NYL9 352 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 ASIC3Q9UHC3 531 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 ZFP69BQ9UJL9 534 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 A0A0D9SFI3 127 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 B4DLN1 442 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 TRAPPC10P48553 1259 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 ATP6V0A1Q93050 837 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 ISCUQ9H1K1 167 aa10.83□□□□□ -0.68
PTPRM-203ENST00000400060 GYG2O15488 501 aa10.82□□□□□ -0.68
PTPRM-203ENST00000400060 ESRRAP11474 423 aaPredicted RBP10.82□□□□□ -0.68
PTPRM-203ENST00000400060 CTNNA2P26232 953 aa10.82□□□□□ -0.68
PTPRM-203ENST00000400060 RBBP8NLQ8NC74 664 aaPredicted RBP10.82□□□□□ -0.68
PTPRM-203ENST00000400060 CLMNQ96JQ2 1002 aa10.82□□□□□ -0.68
PTPRM-203ENST00000400060 SUGCTQ9HAC7 445 aa10.82□□□□□ -0.68
PTPRM-203ENST00000400060 LRP2BPQ9P2M1 347 aa10.82□□□□□ -0.68
PTPRM-203ENST00000400060 MAP3K19Q56UN5 1328 aa10.82□□□□□ -0.68
PTPRM-203ENST00000400060 THAP12O43422 761 aa10.82□□□□□ -0.68
PTPRM-203ENST00000400060 PDE5AO76074 875 aa10.82□□□□□ -0.68
PTPRM-203ENST00000400060 VIL1P09327 827 aaKnown RBP10.82□□□□□ -0.68
PTPRM-203ENST00000400060 MARK3P27448 753 aa10.82□□□□□ -0.68
PTPRM-203ENST00000400060 RNASE9P60153 205 aaKnown RBP10.82□□□□□ -0.68
PTPRM-203ENST00000400060 BLMHQ13867 455 aa10.82□□□□□ -0.68
PTPRM-203ENST00000400060 SPARCL1Q14515 664 aa10.82□□□□□ -0.68
PTPRM-203ENST00000400060 KRT24Q2M2I5 525 aa10.82□□□□□ -0.68
PTPRM-203ENST00000400060 TNNI3KQ59H18 835 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms