RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 CCDC62Q6P9F0 684 aa15.88■□□□□ 0.13
CXCL12-205ENST00000395794 PDCD2LQ9BRP1 358 aa15.88■□□□□ 0.13
CXCL12-205ENST00000395794 TRPV6Q9H1D0 765 aa15.88■□□□□ 0.13
CXCL12-205ENST00000395794 ALDH8A1Q9H2A2 487 aaPredicted RBP15.88■□□□□ 0.13
CXCL12-205ENST00000395794 B4GALT4O60513 344 aa15.87■□□□□ 0.13
CXCL12-205ENST00000395794 HMGB1P09429 215 aaKnown RBP15.87■□□□□ 0.13
CXCL12-205ENST00000395794 CASTP20810 708 aaKnown RBP15.87■□□□□ 0.13
CXCL12-205ENST00000395794 CYP2C18P33260 490 aa15.87■□□□□ 0.13
CXCL12-205ENST00000395794 EPHB4P54760 987 aa15.87■□□□□ 0.13
CXCL12-205ENST00000395794 LAMC2Q13753 1193 aa15.87■□□□□ 0.13
CXCL12-205ENST00000395794 PGM5Q15124 567 aa15.87■□□□□ 0.13
CXCL12-205ENST00000395794 Q7L0L9 218 aa15.87■□□□□ 0.13
CXCL12-205ENST00000395794 DHX37Q8IY37 1157 aaKnown RBP15.87■□□□□ 0.13
CXCL12-205ENST00000395794 SMARCC2Q8TAQ2 1214 aa15.87■□□□□ 0.13
CXCL12-205ENST00000395794 AFG1LQ8WV93 481 aa15.87■□□□□ 0.13
CXCL12-205ENST00000395794 LRRC2Q9BYS8 371 aa15.87■□□□□ 0.13
CXCL12-205ENST00000395794 DDX41Q9UJV9 622 aaKnown RBP15.87■□□□□ 0.13
CXCL12-205ENST00000395794 NOD1Q9Y239 953 aa15.87■□□□□ 0.13
CXCL12-205ENST00000395794 CSF2RAP15509 400 aa15.86■□□□□ 0.13
CXCL12-205ENST00000395794 RXRAP19793 462 aa15.86■□□□□ 0.13
CXCL12-205ENST00000395794 SMAD3P84022 425 aaKnown RBP15.86■□□□□ 0.13
CXCL12-205ENST00000395794 FGD1P98174 961 aa15.86■□□□□ 0.13
CXCL12-205ENST00000395794 PTPN11Q06124 597 aaPredicted RBP15.86■□□□□ 0.13
CXCL12-205ENST00000395794 ARHGAP1Q07960 439 aa15.86■□□□□ 0.13
CXCL12-205ENST00000395794 DGKDQ16760 1214 aa15.86■□□□□ 0.13
CXCL12-205ENST00000395794 NBPF20Q3BBV1 942 aa15.86■□□□□ 0.13
CXCL12-205ENST00000395794 GNPTABQ3T906 1256 aa15.86■□□□□ 0.13
CXCL12-205ENST00000395794 ZNF697Q5TEC3 545 aa15.86■□□□□ 0.13
CXCL12-205ENST00000395794 FAM109BQ6ICB4 259 aaPredicted RBP15.86■□□□□ 0.13
CXCL12-205ENST00000395794 NFRKBQ6P4R8 1299 aa15.86■□□□□ 0.13
CXCL12-205ENST00000395794 PSRC1Q6PGN9 363 aaPredicted RBP15.86■□□□□ 0.13
CXCL12-205ENST00000395794 DHX32Q7L7V1 743 aaKnown RBP15.86■□□□□ 0.13
CXCL12-205ENST00000395794 VSIG10LQ86VR7 867 aa15.86■□□□□ 0.13
CXCL12-205ENST00000395794 SGMS1Q86VZ5 419 aa15.86■□□□□ 0.13
CXCL12-205ENST00000395794 MICU3Q86XE3 530 aa15.86■□□□□ 0.13
CXCL12-205ENST00000395794 FANCBQ8NB91 859 aa15.86■□□□□ 0.13
CXCL12-205ENST00000395794 MTIF3Q9H2K0 278 aaKnown RBP15.86■□□□□ 0.13
CXCL12-205ENST00000395794 PLEKHA8P1O95397 391 aa15.85■□□□□ 0.13
CXCL12-205ENST00000395794 MMP3P08254 477 aa15.85■□□□□ 0.13
CXCL12-205ENST00000395794 TGFB3P10600 412 aa15.85■□□□□ 0.13
CXCL12-205ENST00000395794 TSGA10IPQ3SY00 556 aa15.85■□□□□ 0.13
CXCL12-205ENST00000395794 CCDC82Q8N4S0 544 aa15.85■□□□□ 0.13
CXCL12-205ENST00000395794 SRBD1Q8N5C6 995 aaKnown RBP15.85■□□□□ 0.13
CXCL12-205ENST00000395794 EMID1Q96A84 441 aaPredicted RBP15.85■□□□□ 0.13
CXCL12-205ENST00000395794 NOC4LQ9BVI4 516 aaKnown RBP15.85■□□□□ 0.13
CXCL12-205ENST00000395794 TRMT13Q9NUP7 481 aaKnown RBP15.85■□□□□ 0.13
CXCL12-205ENST00000395794 SZT2Q5T011 3432 aa15.85■□□□□ 0.13
CXCL12-205ENST00000395794 STAM2O75886 525 aa15.84■□□□□ 0.13
CXCL12-205ENST00000395794 REC8O95072 547 aa15.84■□□□□ 0.13
CXCL12-205ENST00000395794 CCL23P55773 120 aa15.84■□□□□ 0.13
CXCL12-205ENST00000395794 RAB11FIP4Q86YS3 637 aa15.84■□□□□ 0.13
CXCL12-205ENST00000395794 RPUSD2Q8IZ73 545 aaKnown RBP15.84■□□□□ 0.13
CXCL12-205ENST00000395794 CMTR1Q8N1G2 835 aaKnown RBP15.84■□□□□ 0.13
CXCL12-205ENST00000395794 PPTC7Q8NI37 304 aa15.84■□□□□ 0.13
CXCL12-205ENST00000395794 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.84■□□□□ 0.13
CXCL12-205ENST00000395794 KATNAL1Q9BW62 490 aa15.84■□□□□ 0.13
CXCL12-205ENST00000395794 IL23AQ9NPF7 189 aa15.84■□□□□ 0.13
CXCL12-205ENST00000395794 RBM28Q9NW13 759 aaKnown RBP15.84■□□□□ 0.13
CXCL12-205ENST00000395794 MTMR10Q9NXD2 777 aa15.84■□□□□ 0.13
CXCL12-205ENST00000395794 LAMA3Q16787 3333 aa15.84■□□□□ 0.13
CXCL12-205ENST00000395794 MYH6P13533 1939 aa15.84■□□□□ 0.13
CXCL12-205ENST00000395794 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.83■□□□□ 0.12
CXCL12-205ENST00000395794 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.83■□□□□ 0.12
CXCL12-205ENST00000395794 PIK3CDO00329 1044 aa15.83■□□□□ 0.12
CXCL12-205ENST00000395794 ZBTB43O43298 467 aa15.83■□□□□ 0.12
CXCL12-205ENST00000395794 FGBP02675 491 aa15.83■□□□□ 0.12
CXCL12-205ENST00000395794 ACRP10323 421 aa15.83■□□□□ 0.12
CXCL12-205ENST00000395794 CYP2C9P11712 490 aa15.83■□□□□ 0.12
CXCL12-205ENST00000395794 EXOSC10Q01780 885 aaKnown RBP15.83■□□□□ 0.12
CXCL12-205ENST00000395794 XRRA1Q6P2D8 792 aa15.83■□□□□ 0.12
CXCL12-205ENST00000395794 TMTC3Q6ZXV5 915 aa15.83■□□□□ 0.12
CXCL12-205ENST00000395794 RASEFQ8IZ41 740 aa15.83■□□□□ 0.12
CXCL12-205ENST00000395794 RETREG2Q8NC44 543 aa15.83■□□□□ 0.12
CXCL12-205ENST00000395794 IL31RAQ8NI17 732 aa15.83■□□□□ 0.12
CXCL12-205ENST00000395794 SPATA33Q96N06 139 aa15.83■□□□□ 0.12
CXCL12-205ENST00000395794 PSTPIP2Q9H939 334 aa15.83■□□□□ 0.12
CXCL12-205ENST00000395794 MLXIPQ9HAP2 919 aa15.83■□□□□ 0.12
CXCL12-205ENST00000395794 NAP1L2Q9ULW6 460 aaPredicted RBP15.83■□□□□ 0.12
CXCL12-205ENST00000395794 PPFIA4O75335 1185 aa15.82■□□□□ 0.12
CXCL12-205ENST00000395794 GGPS1O95749 300 aa15.82■□□□□ 0.12
CXCL12-205ENST00000395794 BFSP2Q13515 415 aa15.82■□□□□ 0.12
CXCL12-205ENST00000395794 COL9A3Q14050 684 aaPredicted RBP15.82■□□□□ 0.12
CXCL12-205ENST00000395794 RTN1Q16799 776 aa15.82■□□□□ 0.12
CXCL12-205ENST00000395794 ADCK5Q3MIX3 580 aa15.82■□□□□ 0.12
CXCL12-205ENST00000395794 TMEM240Q5SV17 173 aa15.82■□□□□ 0.12
CXCL12-205ENST00000395794 CELF3Q5SZQ8 465 aaKnown RBP15.82■□□□□ 0.12
CXCL12-205ENST00000395794 APOA5Q6Q788 366 aa15.82■□□□□ 0.12
CXCL12-205ENST00000395794 USP17L6PQ6QN14 398 aa15.82■□□□□ 0.12
CXCL12-205ENST00000395794 ZNF365Q70YC5 407 aa15.82■□□□□ 0.12
CXCL12-205ENST00000395794 HEATR3Q7Z4Q2 680 aa15.82■□□□□ 0.12
CXCL12-205ENST00000395794 CCDC155Q8N6L0 562 aa15.82■□□□□ 0.12
CXCL12-205ENST00000395794 C7orf31Q8N865 590 aa15.82■□□□□ 0.12
CXCL12-205ENST00000395794 TCEANC2Q96MN5 208 aa15.82■□□□□ 0.12
CXCL12-205ENST00000395794 FAM161BQ96MY7 647 aa15.82■□□□□ 0.12
CXCL12-205ENST00000395794 STXBP5LQ9Y2K9 1186 aa15.82■□□□□ 0.12
CXCL12-205ENST00000395794 RGS20O76081 388 aa15.81■□□□□ 0.12
CXCL12-205ENST00000395794 NEDD9Q14511 834 aa15.81■□□□□ 0.12
CXCL12-205ENST00000395794 PTGISQ16647 500 aa15.81■□□□□ 0.12
CXCL12-205ENST00000395794 UMODL1Q5DID0 1318 aa15.81■□□□□ 0.12
CXCL12-205ENST00000395794 MYSM1Q5VVJ2 828 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms