RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 USP17L11C9JVI0 530 aa17.19■□□□□ 0.34
CPSF7-202ENST00000394888 USP17L18D6R9N7 530 aa17.19■□□□□ 0.34
CPSF7-202ENST00000394888 USP17L22D6RA61 530 aa17.19■□□□□ 0.34
CPSF7-202ENST00000394888 USP17L17D6RBQ6 530 aa17.19■□□□□ 0.34
CPSF7-202ENST00000394888 USP17L19D6RCP7 530 aa17.19■□□□□ 0.34
CPSF7-202ENST00000394888 USP17L20D6RJB6 530 aa17.19■□□□□ 0.34
CPSF7-202ENST00000394888 EEF2P13639 858 aaKnown RBP17.19■□□□□ 0.34
CPSF7-202ENST00000394888 MMP14P50281 582 aa17.19■□□□□ 0.34
CPSF7-202ENST00000394888 USP17L24Q0WX57 530 aa17.19■□□□□ 0.34
CPSF7-202ENST00000394888 QRICH1Q2TAL8 776 aa17.19■□□□□ 0.34
CPSF7-202ENST00000394888 USP17L6PQ6QN14 398 aa17.19■□□□□ 0.34
CPSF7-202ENST00000394888 FKBP1AP62942 108 aaKnown RBP17.18■□□□□ 0.34
CPSF7-202ENST00000394888 GUF1Q8N442 669 aaKnown RBP17.18■□□□□ 0.34
CPSF7-202ENST00000394888 GTPBP4Q9BZE4 634 aaKnown RBP17.18■□□□□ 0.34
CPSF7-202ENST00000394888 KCTD10Q9H3F6 313 aa17.18■□□□□ 0.34
CPSF7-202ENST00000394888 DYMQ7RTS9 669 aa17.18■□□□□ 0.34
CPSF7-202ENST00000394888 SALL4Q9UJQ4 1053 aa17.18■□□□□ 0.34
CPSF7-202ENST00000394888 PLSCR1O15162 318 aa17.18■□□□□ 0.34
CPSF7-202ENST00000394888 ATP1A1P05023 1023 aaKnown RBP17.18■□□□□ 0.34
CPSF7-202ENST00000394888 BEND6Q5SZJ8 279 aaPredicted RBP17.18■□□□□ 0.34
CPSF7-202ENST00000394888 MEX3CQ5U5Q3 659 aaKnown RBP17.18■□□□□ 0.34
CPSF7-202ENST00000394888 HGSNATQ68CP4 663 aa17.18■□□□□ 0.34
CPSF7-202ENST00000394888 DDX25Q9UHL0 483 aaKnown RBP17.18■□□□□ 0.34
CPSF7-202ENST00000394888 NPHP3-ACAD11A0A0J9YXS1 232 aa17.17■□□□□ 0.34
CPSF7-202ENST00000394888 YDJCA8MPS7 323 aa17.17■□□□□ 0.34
CPSF7-202ENST00000394888 GABPB1Q06547 395 aaPredicted RBP17.17■□□□□ 0.34
CPSF7-202ENST00000394888 PAPD7Q5XG87 772 aaKnown RBP17.17■□□□□ 0.34
CPSF7-202ENST00000394888 NCAPH2Q6IBW4 605 aa17.17■□□□□ 0.34
CPSF7-202ENST00000394888 NHEJ1Q9H9Q4 299 aaPredicted RBP17.17■□□□□ 0.34
CPSF7-202ENST00000394888 MYO1AQ9UBC5 1043 aa17.17■□□□□ 0.34
CPSF7-202ENST00000394888 A0A1W2PRG0 241 aa17.17■□□□□ 0.34
CPSF7-202ENST00000394888 SLC12A3P55017 1021 aa17.17■□□□□ 0.34
CPSF7-202ENST00000394888 TEKT1Q969V4 418 aa17.17■□□□□ 0.34
CPSF7-202ENST00000394888 ABCB11O95342 1321 aa17.17■□□□□ 0.34
CPSF7-202ENST00000394888 ZC3H4Q9UPT8 1303 aaKnown RBP17.17■□□□□ 0.34
CPSF7-202ENST00000394888 BRCA1P38398 1863 aaKnown RBP17.17■□□□□ 0.34
CPSF7-202ENST00000394888 MED24O75448 989 aa17.17■□□□□ 0.34
CPSF7-202ENST00000394888 MMP10P09238 476 aa17.17■□□□□ 0.34
CPSF7-202ENST00000394888 LRRC41Q15345 812 aa17.17■□□□□ 0.34
CPSF7-202ENST00000394888 SOGA3Q5TF21 947 aa17.17■□□□□ 0.34
CPSF7-202ENST00000394888 MASTLQ96GX5 879 aa17.17■□□□□ 0.34
CPSF7-202ENST00000394888 PUF60Q9UHX1 559 aaKnown RBP17.17■□□□□ 0.34
CPSF7-202ENST00000394888 SPATA31C1P0DKV0 1188 aa17.16■□□□□ 0.34
CPSF7-202ENST00000394888 CHMP4BP1P59074 171 aa17.16■□□□□ 0.34
CPSF7-202ENST00000394888 ZBED6P86452 979 aa17.16■□□□□ 0.34
CPSF7-202ENST00000394888 COASYQ13057 564 aa17.16■□□□□ 0.34
CPSF7-202ENST00000394888 VWA3BQ502W6 1294 aa17.16■□□□□ 0.34
CPSF7-202ENST00000394888 GPATCH4Q5T3I0 446 aaKnown RBP17.16■□□□□ 0.34
CPSF7-202ENST00000394888 SV2BQ7L1I2 683 aa17.16■□□□□ 0.34
CPSF7-202ENST00000394888 ZC3H12CQ9C0D7 883 aaKnown RBP17.16■□□□□ 0.34
CPSF7-202ENST00000394888 NYAP2Q9P242 653 aa17.16■□□□□ 0.34
CPSF7-202ENST00000394888 PLAGL2Q9UPG8 496 aa17.16■□□□□ 0.34
CPSF7-202ENST00000394888 EIF3CLB5ME19 914 aaKnown RBP17.16■□□□□ 0.34
CPSF7-202ENST00000394888 PDE2AO00408 941 aaPredicted RBP17.16■□□□□ 0.34
CPSF7-202ENST00000394888 TLR2O60603 784 aa17.16■□□□□ 0.34
CPSF7-202ENST00000394888 NPM3O75607 178 aaKnown RBP17.16■□□□□ 0.34
CPSF7-202ENST00000394888 MNS1Q8NEH6 495 aa17.16■□□□□ 0.34
CPSF7-202ENST00000394888 UIMC1Q96RL1 719 aa17.16■□□□□ 0.34
CPSF7-202ENST00000394888 EIF3CQ99613 913 aaKnown RBP17.16■□□□□ 0.34
CPSF7-202ENST00000394888 SUGCTQ9HAC7 445 aa17.16■□□□□ 0.34
CPSF7-202ENST00000394888 LUC7L2Q9Y383 392 aaKnown RBP17.16■□□□□ 0.34
CPSF7-202ENST00000394888 H3BQF6 201 aa17.16■□□□□ 0.34
CPSF7-202ENST00000394888 STAT3P40763 770 aa17.16■□□□□ 0.34
CPSF7-202ENST00000394888 TNNI2P48788 182 aa17.16■□□□□ 0.34
CPSF7-202ENST00000394888 SNAP25P60880 206 aa17.16■□□□□ 0.34
CPSF7-202ENST00000394888 TEX35Q5T0J7 233 aa17.16■□□□□ 0.34
CPSF7-202ENST00000394888 SNX29Q8TEQ0 813 aa17.16■□□□□ 0.34
CPSF7-202ENST00000394888 HNRNPLLQ8WVV9 542 aaKnown RBP17.16■□□□□ 0.34
CPSF7-202ENST00000394888 GOLGA1Q92805 767 aa17.16■□□□□ 0.34
CPSF7-202ENST00000394888 ZSWIM4Q9H7M6 989 aa17.16■□□□□ 0.34
CPSF7-202ENST00000394888 KIF5CO60282 957 aa17.15■□□□□ 0.34
CPSF7-202ENST00000394888 CASP5P51878 434 aa17.15■□□□□ 0.34
CPSF7-202ENST00000394888 APBA1Q02410 837 aa17.15■□□□□ 0.34
CPSF7-202ENST00000394888 KRT26Q7Z3Y9 468 aa17.15■□□□□ 0.34
CPSF7-202ENST00000394888 CUL5Q93034 780 aa17.15■□□□□ 0.34
CPSF7-202ENST00000394888 LOXHD1Q8IVV2 1947 aa17.15■□□□□ 0.34
CPSF7-202ENST00000394888 MYH11P35749 1972 aa17.15■□□□□ 0.34
CPSF7-202ENST00000394888 BICDL2A1A5D9 508 aa17.15■□□□□ 0.34
CPSF7-202ENST00000394888 E9PMD0 336 aa17.15■□□□□ 0.34
CPSF7-202ENST00000394888 FAM86B1E9PN63 330 aa17.15■□□□□ 0.34
CPSF7-202ENST00000394888 FAM86B2P0C5J1 330 aa17.15■□□□□ 0.34
CPSF7-202ENST00000394888 RETREG2Q8NC44 543 aa17.15■□□□□ 0.34
CPSF7-202ENST00000394888 OLIG1Q8TAK6 271 aa17.15■□□□□ 0.34
CPSF7-202ENST00000394888 ENC1O14682 589 aa17.15■□□□□ 0.34
CPSF7-202ENST00000394888 PSMC6P62333 389 aa17.15■□□□□ 0.34
CPSF7-202ENST00000394888 SEPT2Q15019 361 aa17.15■□□□□ 0.34
CPSF7-202ENST00000394888 STRIP1Q5VSL9 837 aa17.15■□□□□ 0.34
CPSF7-202ENST00000394888 NLGN1Q8N2Q7 840 aa17.15■□□□□ 0.34
CPSF7-202ENST00000394888 NAPGQ99747 312 aaPredicted RBP17.15■□□□□ 0.34
CPSF7-202ENST00000394888 NDST4Q9H3R1 872 aa17.15■□□□□ 0.34
CPSF7-202ENST00000394888 CTAGE9A4FU28 777 aa17.14■□□□□ 0.33
CPSF7-202ENST00000394888 MARSP56192 900 aaKnown RBP17.14■□□□□ 0.33
CPSF7-202ENST00000394888 PODNQ7Z5L7 613 aa17.14■□□□□ 0.33
CPSF7-202ENST00000394888 PSTPIP2Q9H939 334 aa17.14■□□□□ 0.33
CPSF7-202ENST00000394888 VAV3Q9UKW4 847 aa17.14■□□□□ 0.33
CPSF7-202ENST00000394888 ECE2O60344 883 aa17.14■□□□□ 0.33
CPSF7-202ENST00000394888 SRGAP2O75044 1071 aa17.14■□□□□ 0.33
CPSF7-202ENST00000394888 CYP11B2P19099 503 aa17.14■□□□□ 0.33
CPSF7-202ENST00000394888 VSNL1P62760 191 aa17.14■□□□□ 0.33
CPSF7-202ENST00000394888 TBC1D8BQ0IIM8 1120 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms