RNA–Protein interactions for RNA: ENST00000394829.6

PPP3CB-204, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP3CB, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-204ENST00000394829 TDP2O95551 362 aa13.88□□□□□ -0.19
PPP3CB-204ENST00000394829 LDHCP07864 332 aa13.88□□□□□ -0.19
PPP3CB-204ENST00000394829 IFIH1Q9BYX4 1025 aaKnown RBP13.88□□□□□ -0.19
PPP3CB-204ENST00000394829 PCDHA13Q9Y5I0 950 aa13.88□□□□□ -0.19
PPP3CB-204ENST00000394829 MOCS3O95396 460 aa13.88□□□□□ -0.19
PPP3CB-204ENST00000394829 EIF4A3P38919 411 aaKnown RBP13.88□□□□□ -0.19
PPP3CB-204ENST00000394829 PPP1R2P41236 205 aa13.88□□□□□ -0.19
PPP3CB-204ENST00000394829 AARSP49588 968 aaKnown RBP eCLIP13.88□□□□□ -0.191e-6■■■■■ 36.1
PPP3CB-204ENST00000394829 GRAPQ13588 217 aa13.88□□□□□ -0.19
PPP3CB-204ENST00000394829 CALCRLQ16602 461 aa13.88□□□□□ -0.19
PPP3CB-204ENST00000394829 MAP9Q49MG5 647 aa13.88□□□□□ -0.19
PPP3CB-204ENST00000394829 COBLL1Q53SF7 1204 aa13.88□□□□□ -0.19
PPP3CB-204ENST00000394829 ZNF772Q68DY9 489 aaPredicted RBP13.88□□□□□ -0.19
PPP3CB-204ENST00000394829 ZNF804AQ7Z570 1209 aa13.88□□□□□ -0.19
PPP3CB-204ENST00000394829 CREG2Q8IUH2 290 aa13.88□□□□□ -0.19
PPP3CB-204ENST00000394829 GRAPLQ8TC17 118 aaPredicted RBP13.88□□□□□ -0.19
PPP3CB-204ENST00000394829 COG1Q8WTW3 980 aa13.88□□□□□ -0.19
PPP3CB-204ENST00000394829 LARP4BQ92615 738 aaKnown RBP13.88□□□□□ -0.19
PPP3CB-204ENST00000394829 ZNF287Q9HBT7 754 aa13.88□□□□□ -0.19
PPP3CB-204ENST00000394829 MCM3P25205 808 aa13.87□□□□□ -0.19
PPP3CB-204ENST00000394829 KIF11P52732 1056 aa13.87□□□□□ -0.19
PPP3CB-204ENST00000394829 MRPS25P82663 173 aaKnown RBP13.87□□□□□ -0.19
PPP3CB-204ENST00000394829 LRRC41Q15345 812 aa13.87□□□□□ -0.19
PPP3CB-204ENST00000394829 EZH2Q15910 746 aaKnown RBP13.87□□□□□ -0.19
PPP3CB-204ENST00000394829 CCNI2Q6ZMN8 369 aaPredicted RBP13.87□□□□□ -0.19
PPP3CB-204ENST00000394829 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.87□□□□□ -0.19
PPP3CB-204ENST00000394829 UNC13DQ70J99 1090 aa13.87□□□□□ -0.19
PPP3CB-204ENST00000394829 CCDC155Q8N6L0 562 aa13.87□□□□□ -0.19
PPP3CB-204ENST00000394829 PSMB7Q99436 277 aa13.87□□□□□ -0.19
PPP3CB-204ENST00000394829 SNX12Q9UMY4 172 aa13.87□□□□□ -0.19
PPP3CB-204ENST00000394829 PRPF6O94906 941 aaKnown RBP13.87□□□□□ -0.19
PPP3CB-204ENST00000394829 HNRNPH3P31942 346 aaKnown RBP13.87□□□□□ -0.19
PPP3CB-204ENST00000394829 KCNK18Q7Z418 384 aa13.87□□□□□ -0.19
PPP3CB-204ENST00000394829 HDAC7Q8WUI4 952 aa13.87□□□□□ -0.19
PPP3CB-204ENST00000394829 SELENOOQ9BVL4 669 aa13.87□□□□□ -0.19
PPP3CB-204ENST00000394829 SH2D4AQ9H788 454 aa13.87□□□□□ -0.19
PPP3CB-204ENST00000394829 CWC15Q9P013 229 aaKnown RBP13.87□□□□□ -0.19
PPP3CB-204ENST00000394829 LRRC53A6NM62 1247 aa13.86□□□□□ -0.19
PPP3CB-204ENST00000394829 CXCR5P32302 372 aa13.86□□□□□ -0.19
PPP3CB-204ENST00000394829 RRAGAQ7L523 313 aa13.86□□□□□ -0.19
PPP3CB-204ENST00000394829 TRIM58Q8NG06 486 aa13.86□□□□□ -0.19
PPP3CB-204ENST00000394829 CDK5RAP3Q96JB5 506 aa13.86□□□□□ -0.19
PPP3CB-204ENST00000394829 TSGA10Q9BZW7 698 aa13.86□□□□□ -0.19
PPP3CB-204ENST00000394829 DEF6Q9H4E7 631 aa13.86□□□□□ -0.19
PPP3CB-204ENST00000394829 SMARCAL1Q9NZC9 954 aa13.86□□□□□ -0.19
PPP3CB-204ENST00000394829 JRKLQ9Y4A0 524 aa13.86□□□□□ -0.19
PPP3CB-204ENST00000394829 GPR75-ASB3A0A0A6YYF3 556 aa13.86□□□□□ -0.19
PPP3CB-204ENST00000394829 USO1O60763 962 aaKnown RBP13.86□□□□□ -0.19
PPP3CB-204ENST00000394829 GGCXP38435 758 aa13.86□□□□□ -0.19
PPP3CB-204ENST00000394829 GPSM2P81274 684 aa13.86□□□□□ -0.19
PPP3CB-204ENST00000394829 MAN2A1Q16706 1144 aa13.86□□□□□ -0.19
PPP3CB-204ENST00000394829 PROM2Q8N271 834 aa13.86□□□□□ -0.19
PPP3CB-204ENST00000394829 GJA10Q969M2 543 aa13.86□□□□□ -0.19
PPP3CB-204ENST00000394829 CD209Q9NNX6 404 aa13.86□□□□□ -0.19
PPP3CB-204ENST00000394829 EHD2Q9NZN4 543 aa13.86□□□□□ -0.19
PPP3CB-204ENST00000394829 KCNG1Q9UIX4 513 aa13.86□□□□□ -0.19
PPP3CB-204ENST00000394829 SALL4Q9UJQ4 1053 aa13.86□□□□□ -0.19
PPP3CB-204ENST00000394829 PDHBP11177 359 aa13.86□□□□□ -0.19
PPP3CB-204ENST00000394829 EIF6P56537 245 aaKnown RBP13.86□□□□□ -0.19
PPP3CB-204ENST00000394829 CLEC10AQ8IUN9 316 aa13.86□□□□□ -0.19
PPP3CB-204ENST00000394829 ANKRD13CQ8N6S4 541 aa13.86□□□□□ -0.19
PPP3CB-204ENST00000394829 RIOX1Q9H6W3 641 aa13.86□□□□□ -0.19
PPP3CB-204ENST00000394829 AGPSO00116 658 aa13.85□□□□□ -0.19
PPP3CB-204ENST00000394829 AKR1B10O60218 316 aa13.85□□□□□ -0.19
PPP3CB-204ENST00000394829 TACC1O75410 805 aa13.85□□□□□ -0.19
PPP3CB-204ENST00000394829 MATR3P43243 847 aaKnown RBP eCLIP13.85□□□□□ -0.19
PPP3CB-204ENST00000394829 FXR2P51116 673 aaKnown RBP eCLIP13.85□□□□□ -0.19
PPP3CB-204ENST00000394829 RHBDL3P58872 404 aa13.85□□□□□ -0.19
PPP3CB-204ENST00000394829 ECM1Q16610 540 aa13.85□□□□□ -0.19
PPP3CB-204ENST00000394829 SLC27A3Q5K4L6 730 aa13.85□□□□□ -0.19
PPP3CB-204ENST00000394829 TRAPPC3LQ5T215 181 aa13.85□□□□□ -0.19
PPP3CB-204ENST00000394829 NFRKBQ6P4R8 1299 aa13.85□□□□□ -0.19
PPP3CB-204ENST00000394829 LRRC47Q8N1G4 583 aaKnown RBP13.85□□□□□ -0.19
PPP3CB-204ENST00000394829 SNX29Q8TEQ0 813 aa13.85□□□□□ -0.19
PPP3CB-204ENST00000394829 DDX12PQ92771 950 aa13.85□□□□□ -0.19
PPP3CB-204ENST00000394829 LRRC1Q9BTT6 524 aa13.85□□□□□ -0.19
PPP3CB-204ENST00000394829 TNS1Q9HBL0 1735 aaKnown RBP13.85□□□□□ -0.19
PPP3CB-204ENST00000394829 PVALEFA0A1B0GWK0 134 aa13.85□□□□□ -0.19
PPP3CB-204ENST00000394829 LRRC31Q6UY01 552 aa13.85□□□□□ -0.19
PPP3CB-204ENST00000394829 LRRC55Q6ZSA7 311 aa13.85□□□□□ -0.19
PPP3CB-204ENST00000394829 GUF1Q8N442 669 aaKnown RBP13.85□□□□□ -0.19
PPP3CB-204ENST00000394829 BAP1Q92560 729 aa13.85□□□□□ -0.19
PPP3CB-204ENST00000394829 RAD54LQ92698 747 aa13.85□□□□□ -0.19
PPP3CB-204ENST00000394829 STK17AQ9UEE5 414 aa13.85□□□□□ -0.19
PPP3CB-204ENST00000394829 DMGDHQ9UI17 866 aaKnown RBP13.85□□□□□ -0.19
PPP3CB-204ENST00000394829 ESYT2A0FGR8 921 aa13.84□□□□□ -0.19
PPP3CB-204ENST00000394829 MYO1CO00159 1063 aa13.84□□□□□ -0.19
PPP3CB-204ENST00000394829 NCK2O43639 380 aa13.84□□□□□ -0.19
PPP3CB-204ENST00000394829 LCA5LO95447 670 aa13.84□□□□□ -0.19
PPP3CB-204ENST00000394829 SMARCA1P28370 1054 aa13.84□□□□□ -0.19
PPP3CB-204ENST00000394829 RFC4P35249 363 aa13.84□□□□□ -0.19
PPP3CB-204ENST00000394829 GFPT1Q06210 699 aaPredicted RBP13.84□□□□□ -0.19
PPP3CB-204ENST00000394829 PLEKHA4Q9H4M7 779 aa13.84□□□□□ -0.19
PPP3CB-204ENST00000394829 UFL1O94874 794 aa13.84□□□□□ -0.19
PPP3CB-204ENST00000394829 SLC7A5Q01650 507 aa13.84□□□□□ -0.19
PPP3CB-204ENST00000394829 TMEM266Q2M3C6 531 aa13.84□□□□□ -0.19
PPP3CB-204ENST00000394829 SRLQ86TD4 932 aa13.84□□□□□ -0.19
PPP3CB-204ENST00000394829 SPATA4Q8NEY3 305 aa13.84□□□□□ -0.19
PPP3CB-204ENST00000394829 AFAP1L1Q8TED9 768 aa13.84□□□□□ -0.19
PPP3CB-204ENST00000394829 OSBPL9Q96SU4 736 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms