RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 TEX2Q8IWB9 1127 aa4.38□□□□□ -1.71
PTPRC-205ENST00000391970 PRPF38AQ8NAV1 312 aaKnown RBP4.38□□□□□ -1.71
PTPRC-205ENST00000391970 FBXW5Q969U6 566 aa4.38□□□□□ -1.71
PTPRC-205ENST00000391970 ASIC4Q96FT7 647 aa4.38□□□□□ -1.71
PTPRC-205ENST00000391970 TMEM169Q96HH4 297 aa4.38□□□□□ -1.71
PTPRC-205ENST00000391970 WNK4Q96J92 1243 aa4.38□□□□□ -1.71
PTPRC-205ENST00000391970 MTA3Q9BTC8 594 aa4.38□□□□□ -1.71
PTPRC-205ENST00000391970 C19orf73Q9NVV2 129 aa4.38□□□□□ -1.71
PTPRC-205ENST00000391970 BTG4Q9NY30 223 aa4.38□□□□□ -1.71
PTPRC-205ENST00000391970 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.38□□□□□ -1.71
PTPRC-205ENST00000391970 MARCH2Q9P0N8 246 aa4.38□□□□□ -1.71
PTPRC-205ENST00000391970 IMPACTQ9P2X3 320 aa4.38□□□□□ -1.71
PTPRC-205ENST00000391970 MCM8Q9UJA3 840 aa4.38□□□□□ -1.71
PTPRC-205ENST00000391970 ADAMTS6Q9UKP5 1117 aa4.38□□□□□ -1.71
PTPRC-205ENST00000391970 RWDD3Q9Y3V2 267 aa4.38□□□□□ -1.71
PTPRC-205ENST00000391970 TAF6LQ9Y6J9 622 aa4.38□□□□□ -1.71
PTPRC-205ENST00000391970 CCDC66A2RUB6 948 aa4.37□□□□□ -1.71
PTPRC-205ENST00000391970 FITM1A5D6W6 292 aa4.37□□□□□ -1.71
PTPRC-205ENST00000391970 M0R2C6 588 aa4.37□□□□□ -1.71
PTPRC-205ENST00000391970 GSTA4O15217 222 aa4.37□□□□□ -1.71
PTPRC-205ENST00000391970 ADAMTS4O75173 837 aa4.37□□□□□ -1.71
PTPRC-205ENST00000391970 EYA4O95677 639 aa4.37□□□□□ -1.71
PTPRC-205ENST00000391970 EFEMP2O95967 443 aa4.37□□□□□ -1.71
PTPRC-205ENST00000391970 HPXP02790 462 aa4.37□□□□□ -1.71
PTPRC-205ENST00000391970 MSL3P1P0C860 447 aa4.37□□□□□ -1.71
PTPRC-205ENST00000391970 PYGMP11217 842 aa4.37□□□□□ -1.71
PTPRC-205ENST00000391970 CDK11BP21127 795 aaKnown RBP4.37□□□□□ -1.71
PTPRC-205ENST00000391970 GDNFP39905 211 aa4.37□□□□□ -1.71
PTPRC-205ENST00000391970 MECP2P51608 486 aaKnown RBP4.37□□□□□ -1.71
PTPRC-205ENST00000391970 MVKQ03426 396 aa4.37□□□□□ -1.71
PTPRC-205ENST00000391970 PLCL1Q15111 1095 aa4.37□□□□□ -1.71
PTPRC-205ENST00000391970 NR0B2Q15466 257 aa4.37□□□□□ -1.71
PTPRC-205ENST00000391970 SLC14A2Q15849 920 aa4.37□□□□□ -1.71
PTPRC-205ENST00000391970 TMEM177Q53S58 311 aa4.37□□□□□ -1.71
PTPRC-205ENST00000391970 GALNT18Q6P9A2 607 aa4.37□□□□□ -1.71
PTPRC-205ENST00000391970 C16orf59Q7L2K0 433 aa4.37□□□□□ -1.71
PTPRC-205ENST00000391970 OVCH1Q7RTY7 1134 aa4.37□□□□□ -1.71
PTPRC-205ENST00000391970 SPPL2CQ8IUH8 684 aa4.37□□□□□ -1.71
PTPRC-205ENST00000391970 OXR1Q8N573 874 aa4.37□□□□□ -1.71
PTPRC-205ENST00000391970 LZTR1Q8N653 840 aa4.37□□□□□ -1.71
PTPRC-205ENST00000391970 CHST14Q8NCH0 376 aa4.37□□□□□ -1.71
PTPRC-205ENST00000391970 AGBL5Q8NDL9 886 aa4.37□□□□□ -1.71
PTPRC-205ENST00000391970 PI4K2BQ8TCG2 481 aa4.37□□□□□ -1.71
PTPRC-205ENST00000391970 PLEKHO2Q8TD55 490 aa4.37□□□□□ -1.71
PTPRC-205ENST00000391970 PANK1Q8TE04 598 aa4.37□□□□□ -1.71
PTPRC-205ENST00000391970 TRMT2BQ96GJ1 504 aaKnown RBP4.37□□□□□ -1.71
PTPRC-205ENST00000391970 PLCD4Q9BRC7 762 aa4.37□□□□□ -1.71
PTPRC-205ENST00000391970 SP110Q9HB58 689 aa4.37□□□□□ -1.71
PTPRC-205ENST00000391970 MBNL3Q9NUK0 354 aaKnown RBP4.37□□□□□ -1.71
PTPRC-205ENST00000391970 FBLN5Q9UBX5 448 aa4.37□□□□□ -1.71
PTPRC-205ENST00000391970 ACSL6Q9UKU0 697 aa4.37□□□□□ -1.71
PTPRC-205ENST00000391970 CBLCQ9ULV8 474 aa4.37□□□□□ -1.71
PTPRC-205ENST00000391970 X6R8D5 127 aa4.37□□□□□ -1.71
PTPRC-205ENST00000391970 ZNF891A8MT65 544 aaPredicted RBP4.36□□□□□ -1.71
PTPRC-205ENST00000391970 C22orf46C9J442 243 aa4.36□□□□□ -1.71
PTPRC-205ENST00000391970 TRAF5O00463 557 aa4.36□□□□□ -1.71
PTPRC-205ENST00000391970 RAB11FIP3O75154 756 aa4.36□□□□□ -1.71
PTPRC-205ENST00000391970 WNT11O96014 354 aa4.36□□□□□ -1.71
PTPRC-205ENST00000391970 FUCA1P04066 466 aa4.36□□□□□ -1.71
PTPRC-205ENST00000391970 RNASE1P07998 156 aaKnown RBP4.36□□□□□ -1.71
PTPRC-205ENST00000391970 CPEP16870 476 aa4.36□□□□□ -1.71
PTPRC-205ENST00000391970 BPIP17213 487 aa4.36□□□□□ -1.71
PTPRC-205ENST00000391970 DNM2P50570 870 aa4.36□□□□□ -1.71
PTPRC-205ENST00000391970 ERVFC1P60507 584 aa4.36□□□□□ -1.71
PTPRC-205ENST00000391970 ST5P78524 1137 aa4.36□□□□□ -1.71
PTPRC-205ENST00000391970 DSG1Q02413 1049 aa4.36□□□□□ -1.71
PTPRC-205ENST00000391970 STRN3Q13033 797 aa4.36□□□□□ -1.71
PTPRC-205ENST00000391970 KIR3DS1Q14943 382 aa4.36□□□□□ -1.71
PTPRC-205ENST00000391970 SKOR2Q2VWA4 1001 aaPredicted RBP4.36□□□□□ -1.71
PTPRC-205ENST00000391970 HABP4Q5JVS0 413 aaKnown RBP4.36□□□□□ -1.71
PTPRC-205ENST00000391970 MROH9Q5TGP6 573 aa4.36□□□□□ -1.71
PTPRC-205ENST00000391970 WWC2Q6AWC2 1192 aa4.36□□□□□ -1.71
PTPRC-205ENST00000391970 RIOX2Q8IUF8 465 aa4.36□□□□□ -1.71
PTPRC-205ENST00000391970 CISD2Q8N5K1 135 aaKnown RBP4.36□□□□□ -1.71
PTPRC-205ENST00000391970 NUP43Q8NFH3 380 aa4.36□□□□□ -1.71
PTPRC-205ENST00000391970 OR2W6PQ8NHA6 318 aa4.36□□□□□ -1.71
PTPRC-205ENST00000391970 STAG1Q8WVM7 1258 aa4.36□□□□□ -1.71
PTPRC-205ENST00000391970 KCNJ15Q99712 375 aa4.36□□□□□ -1.71
PTPRC-205ENST00000391970 JAM3Q9BX67 310 aa4.36□□□□□ -1.71
PTPRC-205ENST00000391970 EPB41L1Q9H4G0 881 aa4.36□□□□□ -1.71
PTPRC-205ENST00000391970 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.36□□□□□ -1.71
PTPRC-205ENST00000391970 CABP5Q9NP86 173 aa4.36□□□□□ -1.71
PTPRC-205ENST00000391970 PDLIM7Q9NR12 457 aa4.36□□□□□ -1.71
PTPRC-205ENST00000391970 TYW1Q9NV66 732 aaKnown RBP4.36□□□□□ -1.71
PTPRC-205ENST00000391970 PCMTD2Q9NV79 361 aa4.36□□□□□ -1.71
PTPRC-205ENST00000391970 DDX56Q9NY93 547 aaKnown RBP4.36□□□□□ -1.71
PTPRC-205ENST00000391970 B4GALT6Q9UBX8 382 aa4.36□□□□□ -1.71
PTPRC-205ENST00000391970 COA3Q9Y2R0 106 aaPredicted RBP4.36□□□□□ -1.71
PTPRC-205ENST00000391970 A0A1W2PQ27 194 aa4.35□□□□□ -1.71
PTPRC-205ENST00000391970 A0A1W2PQ64 194 aa4.35□□□□□ -1.71
PTPRC-205ENST00000391970 A0A1W2PQC6 194 aa4.35□□□□□ -1.71
PTPRC-205ENST00000391970 A0A1W2PQD8 194 aa4.35□□□□□ -1.71
PTPRC-205ENST00000391970 ZNF561-AS1K7EIQ3 104 aa4.35□□□□□ -1.71
PTPRC-205ENST00000391970 BRINP1O60477 761 aa4.35□□□□□ -1.71
PTPRC-205ENST00000391970 PSPNO60542 156 aa4.35□□□□□ -1.71
PTPRC-205ENST00000391970 F2P00734 622 aa4.35□□□□□ -1.71
PTPRC-205ENST00000391970 GNAT1P11488 350 aa4.35□□□□□ -1.71
PTPRC-205ENST00000391970 PDE6AP16499 860 aa4.35□□□□□ -1.71
PTPRC-205ENST00000391970 PRKCAP17252 672 aa4.35□□□□□ -1.71
PTPRC-205ENST00000391970 TACR1P25103 407 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms