RNA–Protein interactions for RNA: ENST00000379960.9

ITSN1-201, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-201ENST00000379960 SMAPO00193 183 aa11.89□□□□□ -0.51
ITSN1-201ENST00000379960 IRS4O14654 1257 aaPredicted RBP11.89□□□□□ -0.51
ITSN1-201ENST00000379960 GNPATO15228 680 aa11.89□□□□□ -0.51
ITSN1-201ENST00000379960 NQO1P15559 274 aaKnown RBP11.89□□□□□ -0.51
ITSN1-201ENST00000379960 VAV2P52735 878 aa11.89□□□□□ -0.51
ITSN1-201ENST00000379960 ODF2Q5BJF6 829 aa11.89□□□□□ -0.51
ITSN1-201ENST00000379960 DPY19L2Q6NUT2 758 aa11.89□□□□□ -0.51
ITSN1-201ENST00000379960 SYNE3Q6ZMZ3 975 aa11.89□□□□□ -0.51
ITSN1-201ENST00000379960 TMEM110Q86TL2 294 aa11.89□□□□□ -0.51
ITSN1-201ENST00000379960 RNF168Q8IYW5 571 aaPredicted RBP11.89□□□□□ -0.51
ITSN1-201ENST00000379960 IFT81Q8WYA0 676 aa11.89□□□□□ -0.51
ITSN1-201ENST00000379960 MED15Q96RN5 788 aa11.89□□□□□ -0.51
ITSN1-201ENST00000379960 UNC45AQ9H3U1 944 aa11.89□□□□□ -0.51
ITSN1-201ENST00000379960 TAF1DQ9H5J8 278 aaPredicted RBP11.89□□□□□ -0.51
ITSN1-201ENST00000379960 KCNMB3Q9NPA1 279 aa11.89□□□□□ -0.51
ITSN1-201ENST00000379960 ABHD10Q9NUJ1 306 aa11.89□□□□□ -0.51
ITSN1-201ENST00000379960 RNF225M0QZC1 329 aaPredicted RBP11.88□□□□□ -0.51
ITSN1-201ENST00000379960 PFDN1O60925 122 aa11.88□□□□□ -0.51
ITSN1-201ENST00000379960 SUSD4Q5VX71 490 aa11.88□□□□□ -0.51
ITSN1-201ENST00000379960 MMGT1Q8N4V1 131 aa11.88□□□□□ -0.51
ITSN1-201ENST00000379960 CCDC197Q8NCU1 140 aa11.88□□□□□ -0.51
ITSN1-201ENST00000379960 ENOX1Q8TC92 643 aaKnown RBP11.88□□□□□ -0.51
ITSN1-201ENST00000379960 NUP88Q99567 741 aaPredicted RBP11.88□□□□□ -0.51
ITSN1-201ENST00000379960 GREM2Q9H772 168 aa11.88□□□□□ -0.51
ITSN1-201ENST00000379960 TMOD4Q9NZQ9 345 aa11.88□□□□□ -0.51
ITSN1-201ENST00000379960 ABCF2Q9UG63 623 aa11.88□□□□□ -0.51
ITSN1-201ENST00000379960 SLC12A6Q9UHW9 1150 aa11.88□□□□□ -0.51
ITSN1-201ENST00000379960 FAM200BP0CF97 657 aa11.88□□□□□ -0.51
ITSN1-201ENST00000379960 CUL4BQ13620 913 aa11.88□□□□□ -0.51
ITSN1-201ENST00000379960 LBRQ14739 615 aaKnown RBP11.88□□□□□ -0.51
ITSN1-201ENST00000379960 ZNF589Q86UQ0 364 aaPredicted RBP11.88□□□□□ -0.51
ITSN1-201ENST00000379960 KIF2BQ8N4N8 673 aa11.88□□□□□ -0.51
ITSN1-201ENST00000379960 ZBTB38Q8NAP3 1195 aaPredicted RBP11.88□□□□□ -0.51
ITSN1-201ENST00000379960 DBNDD2Q9BQY9 259 aa11.88□□□□□ -0.51
ITSN1-201ENST00000379960 COPRSQ9NQ92 184 aa11.88□□□□□ -0.51
ITSN1-201ENST00000379960 MAN1B1Q9UKM7 699 aa11.88□□□□□ -0.51
ITSN1-201ENST00000379960 EPN1Q9Y6I3 576 aaPredicted RBP11.88□□□□□ -0.51
ITSN1-201ENST00000379960 COL15A1P39059 1388 aa11.88□□□□□ -0.51
ITSN1-201ENST00000379960 F8W031 263 aaPredicted RBP11.87□□□□□ -0.51
ITSN1-201ENST00000379960 NDUFA10O95299 355 aa11.87□□□□□ -0.51
ITSN1-201ENST00000379960 CARSP49589 748 aaKnown RBP11.87□□□□□ -0.51
ITSN1-201ENST00000379960 ANO1Q5XXA6 986 aa11.87□□□□□ -0.51
ITSN1-201ENST00000379960 PSMB7Q99436 277 aa11.87□□□□□ -0.51
ITSN1-201ENST00000379960 HAUS4Q9H6D7 363 aa11.87□□□□□ -0.51
ITSN1-201ENST00000379960 ECHDC1Q9NTX5 307 aa11.87□□□□□ -0.51
ITSN1-201ENST00000379960 EHD2Q9NZN4 543 aa11.87□□□□□ -0.51
ITSN1-201ENST00000379960 IGF2BP3O00425 579 aaKnown RBP eCLIP11.87□□□□□ -0.51
ITSN1-201ENST00000379960 CAMTA2O94983 1202 aa11.87□□□□□ -0.51
ITSN1-201ENST00000379960 PCCAP05165 728 aaPredicted RBP11.87□□□□□ -0.51
ITSN1-201ENST00000379960 GSTA1P08263 222 aa11.87□□□□□ -0.51
ITSN1-201ENST00000379960 STX17P56962 302 aa11.87□□□□□ -0.51
ITSN1-201ENST00000379960 PRPF4BQ13523 1007 aaKnown RBP11.87□□□□□ -0.51
ITSN1-201ENST00000379960 IFI16Q16666 785 aaKnown RBP11.87□□□□□ -0.51
ITSN1-201ENST00000379960 KBTBD12Q3ZCT8 623 aa11.87□□□□□ -0.51
ITSN1-201ENST00000379960 FOXB2Q5VYV0 432 aa11.87□□□□□ -0.51
ITSN1-201ENST00000379960 HAUS3Q68CZ6 603 aa11.87□□□□□ -0.51
ITSN1-201ENST00000379960 SHC4Q6S5L8 630 aa11.87□□□□□ -0.51
ITSN1-201ENST00000379960 SPATA4Q8NEY3 305 aa11.87□□□□□ -0.51
ITSN1-201ENST00000379960 EVI5LQ96CN4 794 aa11.87□□□□□ -0.51
ITSN1-201ENST00000379960 ARPC5LQ9BPX5 153 aa11.87□□□□□ -0.51
ITSN1-201ENST00000379960 INCENPQ9NQS7 918 aa11.87□□□□□ -0.51
ITSN1-201ENST00000379960 GJB4Q9NTQ9 266 aa11.87□□□□□ -0.51
ITSN1-201ENST00000379960 DBNLQ9UJU6 430 aaKnown RBP11.87□□□□□ -0.51
ITSN1-201ENST00000379960 PLAAQ9Y263 795 aa11.87□□□□□ -0.51
ITSN1-201ENST00000379960 ZSCAN5CA6NGD5 496 aaPredicted RBP11.86□□□□□ -0.51
ITSN1-201ENST00000379960 CHGBP05060 677 aa11.86□□□□□ -0.51
ITSN1-201ENST00000379960 DRD4P21917 467 aa11.86□□□□□ -0.51
ITSN1-201ENST00000379960 SGSM1Q2NKQ1 1148 aa11.86□□□□□ -0.51
ITSN1-201ENST00000379960 TNNI3KQ59H18 835 aa11.86□□□□□ -0.51
ITSN1-201ENST00000379960 KLHL10Q6JEL2 608 aa11.86□□□□□ -0.51
ITSN1-201ENST00000379960 SEPT14Q6ZU15 432 aa11.86□□□□□ -0.51
ITSN1-201ENST00000379960 APTXQ7Z2E3 356 aaKnown RBP11.86□□□□□ -0.51
ITSN1-201ENST00000379960 APLFQ8IW19 511 aaPredicted RBP11.86□□□□□ -0.51
ITSN1-201ENST00000379960 SLC35B4Q969S0 331 aa11.86□□□□□ -0.51
ITSN1-201ENST00000379960 CCDC51Q96ER9 411 aa11.86□□□□□ -0.51
ITSN1-201ENST00000379960 ADAM22Q9P0K1 906 aa11.86□□□□□ -0.51
ITSN1-201ENST00000379960 HMG20BQ9P0W2 317 aa11.86□□□□□ -0.51
ITSN1-201ENST00000379960 ZMYND8Q9ULU4 1186 aaPredicted RBP11.86□□□□□ -0.51
ITSN1-201ENST00000379960 FPGT-TNNI3KV9GXZ4 949 aa11.86□□□□□ -0.51
ITSN1-201ENST00000379960 MYH8P13535 1937 aa11.86□□□□□ -0.51
ITSN1-201ENST00000379960 THSD7AQ9UPZ6 1657 aa11.86□□□□□ -0.51
ITSN1-201ENST00000379960 CARMIL3Q8ND23 1372 aa11.86□□□□□ -0.51
ITSN1-201ENST00000379960 E2F6O75461 281 aa11.86□□□□□ -0.51
ITSN1-201ENST00000379960 GFPT2O94808 682 aa11.86□□□□□ -0.51
ITSN1-201ENST00000379960 CCT6AP40227 531 aaKnown RBP11.86□□□□□ -0.51
ITSN1-201ENST00000379960 PBX1P40424 430 aa11.86□□□□□ -0.51
ITSN1-201ENST00000379960 USP46P62068 366 aa11.86□□□□□ -0.51
ITSN1-201ENST00000379960 KLC1Q07866 573 aa11.86□□□□□ -0.51
ITSN1-201ENST00000379960 PABPC4Q13310 644 aaKnown RBP eCLIP11.86□□□□□ -0.51
ITSN1-201ENST00000379960 ATG9AQ7Z3C6 839 aa11.86□□□□□ -0.51
ITSN1-201ENST00000379960 ANKS4BQ8N8V4 417 aa11.86□□□□□ -0.51
ITSN1-201ENST00000379960 OR2W6PQ8NHA6 318 aa11.86□□□□□ -0.51
ITSN1-201ENST00000379960 CNOT8Q9UFF9 292 aaKnown RBP11.86□□□□□ -0.51
ITSN1-201ENST00000379960 GGT7Q9UJ14 662 aa11.86□□□□□ -0.51
ITSN1-201ENST00000379960 BRWD3Q6RI45 1802 aa11.86□□□□□ -0.51
ITSN1-201ENST00000379960 ATRNO75882 1429 aa11.86□□□□□ -0.51
ITSN1-201ENST00000379960 MACROD2A1Z1Q3 448 aa11.86□□□□□ -0.51
ITSN1-201ENST00000379960 ABLIM1O14639 778 aa11.86□□□□□ -0.51
ITSN1-201ENST00000379960 KRT16P08779 473 aa11.86□□□□□ -0.51
ITSN1-201ENST00000379960 VIL1P09327 827 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms