RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 VPS18Q9P253 973 aa12.16□□□□□ -0.46
BEST1-201ENST00000378043 CAPN6Q9Y6Q1 641 aa12.16□□□□□ -0.46
BEST1-201ENST00000378043 IPO7O95373 1038 aaKnown RBP12.15□□□□□ -0.46
BEST1-201ENST00000378043 IDEP14735 1019 aa12.15□□□□□ -0.46
BEST1-201ENST00000378043 HOXA10P31260 410 aaPredicted RBP12.15□□□□□ -0.46
BEST1-201ENST00000378043 TNNI2P48788 182 aa12.15□□□□□ -0.46
BEST1-201ENST00000378043 KIF5AQ12840 1032 aa12.15□□□□□ -0.46
BEST1-201ENST00000378043 MAN2A1Q16706 1144 aa12.15□□□□□ -0.46
BEST1-201ENST00000378043 TMEM266Q2M3C6 531 aa12.15□□□□□ -0.46
BEST1-201ENST00000378043 GPIHBP1Q8IV16 184 aa12.15□□□□□ -0.46
BEST1-201ENST00000378043 TXLNBQ8N3L3 684 aa12.15□□□□□ -0.46
BEST1-201ENST00000378043 CERS5Q8N5B7 392 aa12.15□□□□□ -0.46
BEST1-201ENST00000378043 BAP1Q92560 729 aa12.15□□□□□ -0.46
BEST1-201ENST00000378043 RBM17Q96I25 401 aaKnown RBP12.15□□□□□ -0.46
BEST1-201ENST00000378043 RIC8AQ9NPQ8 531 aa12.15□□□□□ -0.46
BEST1-201ENST00000378043 CALCOCO1Q9P1Z2 691 aa12.15□□□□□ -0.46
BEST1-201ENST00000378043 LRRC37AA6NMS7 1700 aa12.15□□□□□ -0.46
BEST1-201ENST00000378043 ABCB11O95342 1321 aa12.15□□□□□ -0.46
BEST1-201ENST00000378043 PNMA6FA0A0J9YX94 578 aa12.15□□□□□ -0.47
BEST1-201ENST00000378043 C6orf229H3BNL8 230 aa12.15□□□□□ -0.47
BEST1-201ENST00000378043 LCA5LO95447 670 aa12.15□□□□□ -0.47
BEST1-201ENST00000378043 SLURP2P0DP57 97 aa12.15□□□□□ -0.47
BEST1-201ENST00000378043 ATP2B2Q01814 1243 aa12.15□□□□□ -0.47
BEST1-201ENST00000378043 LRRC63Q05C16 580 aa12.15□□□□□ -0.47
BEST1-201ENST00000378043 PPP4R3AQ6IN85 833 aa12.15□□□□□ -0.47
BEST1-201ENST00000378043 CCDC155Q8N6L0 562 aa12.15□□□□□ -0.47
BEST1-201ENST00000378043 CDK5RAP3Q96JB5 506 aa12.15□□□□□ -0.47
BEST1-201ENST00000378043 USP21Q9UK80 565 aa12.15□□□□□ -0.47
BEST1-201ENST00000378043 FAN1Q9Y2M0 1017 aa12.15□□□□□ -0.47
BEST1-201ENST00000378043 PCDHA13Q9Y5I0 950 aa12.15□□□□□ -0.47
BEST1-201ENST00000378043 ADAMTSL1Q8N6G6 1762 aa12.15□□□□□ -0.47
BEST1-201ENST00000378043 GREB1LQ9C091 1923 aaPredicted RBP12.15□□□□□ -0.47
BEST1-201ENST00000378043 ZC3H4Q9UPT8 1303 aaKnown RBP12.14□□□□□ -0.47
BEST1-201ENST00000378043 ZMYND10O75800 440 aa12.14□□□□□ -0.47
BEST1-201ENST00000378043 MYBL2P10244 700 aa12.14□□□□□ -0.47
BEST1-201ENST00000378043 EIF4A3P38919 411 aaKnown RBP12.14□□□□□ -0.47
BEST1-201ENST00000378043 KIF11P52732 1056 aa12.14□□□□□ -0.47
BEST1-201ENST00000378043 ZCWPW2Q504Y3 356 aa12.14□□□□□ -0.47
BEST1-201ENST00000378043 KRT79Q5XKE5 535 aa12.14□□□□□ -0.47
BEST1-201ENST00000378043 CREG2Q8IUH2 290 aa12.14□□□□□ -0.47
BEST1-201ENST00000378043 SECISBP2LQ93073 1101 aaKnown RBP12.14□□□□□ -0.47
BEST1-201ENST00000378043 IQCDQ96DY2 449 aa12.14□□□□□ -0.47
BEST1-201ENST00000378043 IFIH1Q9BYX4 1025 aaKnown RBP12.14□□□□□ -0.47
BEST1-201ENST00000378043 SH2D4AQ9H788 454 aa12.14□□□□□ -0.47
BEST1-201ENST00000378043 MMRN2Q9H8L6 949 aa12.14□□□□□ -0.47
BEST1-201ENST00000378043 MLXIPQ9HAP2 919 aa12.14□□□□□ -0.47
BEST1-201ENST00000378043 LRRC53A6NM62 1247 aa12.14□□□□□ -0.47
BEST1-201ENST00000378043 F8W031 263 aaPredicted RBP12.14□□□□□ -0.47
BEST1-201ENST00000378043 EIF3JO75822 258 aaKnown RBP12.14□□□□□ -0.47
BEST1-201ENST00000378043 TTLL1O95922 423 aa12.14□□□□□ -0.47
BEST1-201ENST00000378043 ADRA2BP18089 450 aa12.14□□□□□ -0.47
BEST1-201ENST00000378043 SHMT1P34896 483 aa12.14□□□□□ -0.47
BEST1-201ENST00000378043 SLC16A2P36021 539 aa12.14□□□□□ -0.47
BEST1-201ENST00000378043 DDR1Q08345 913 aa12.14□□□□□ -0.47
BEST1-201ENST00000378043 KCNMA1Q12791 1236 aa12.14□□□□□ -0.47
BEST1-201ENST00000378043 GPS2Q13227 327 aa12.14□□□□□ -0.47
BEST1-201ENST00000378043 SPA17Q15506 151 aa12.14□□□□□ -0.47
BEST1-201ENST00000378043 RPGRIP1Q96KN7 1286 aa12.14□□□□□ -0.47
BEST1-201ENST00000378043 FGFBP2Q9BYJ0 223 aa12.14□□□□□ -0.47
BEST1-201ENST00000378043 RAB34Q9BZG1 259 aa12.14□□□□□ -0.47
BEST1-201ENST00000378043 JADE2Q9NQC1 790 aa12.14□□□□□ -0.47
BEST1-201ENST00000378043 SALL4Q9UJQ4 1053 aa12.14□□□□□ -0.47
BEST1-201ENST00000378043 TARSL2A2RTX5 802 aaKnown RBP12.13□□□□□ -0.47
BEST1-201ENST00000378043 CCDC96Q2M329 555 aa12.13□□□□□ -0.47
BEST1-201ENST00000378043 ASTE1Q2TB18 679 aaPredicted RBP12.13□□□□□ -0.47
BEST1-201ENST00000378043 RRAGAQ7L523 313 aa12.13□□□□□ -0.47
BEST1-201ENST00000378043 CCDC84Q86UT8 332 aaPredicted RBP12.13□□□□□ -0.47
BEST1-201ENST00000378043 COG1Q8WTW3 980 aa12.13□□□□□ -0.47
BEST1-201ENST00000378043 MXD3Q9BW11 206 aa12.13□□□□□ -0.47
BEST1-201ENST00000378043 DDX25Q9UHL0 483 aaKnown RBP12.13□□□□□ -0.47
BEST1-201ENST00000378043 SERPINB13Q9UIV8 391 aa12.13□□□□□ -0.47
BEST1-201ENST00000378043 SNX12Q9UMY4 172 aa12.13□□□□□ -0.47
BEST1-201ENST00000378043 QSER1Q2KHR3 1735 aa12.13□□□□□ -0.47
BEST1-201ENST00000378043 USP17L10C9JJH3 530 aa12.13□□□□□ -0.47
BEST1-201ENST00000378043 RIMBP2O15034 1052 aa12.13□□□□□ -0.47
BEST1-201ENST00000378043 TOM1O60784 492 aa12.13□□□□□ -0.47
BEST1-201ENST00000378043 LMAN1P49257 510 aa12.13□□□□□ -0.47
BEST1-201ENST00000378043 CKAP4Q07065 602 aaKnown RBP12.13□□□□□ -0.47
BEST1-201ENST00000378043 COASYQ13057 564 aa12.13□□□□□ -0.47
BEST1-201ENST00000378043 PSMD2Q13200 908 aa12.13□□□□□ -0.47
BEST1-201ENST00000378043 MTMR8Q96EF0 704 aa12.13□□□□□ -0.47
BEST1-201ENST00000378043 TSGA10Q9BZW7 698 aa12.13□□□□□ -0.47
BEST1-201ENST00000378043 JRKLQ9Y4A0 524 aa12.13□□□□□ -0.47
BEST1-201ENST00000378043 PHACTR2O75167 634 aa12.12□□□□□ -0.47
BEST1-201ENST00000378043 MOCS3O95396 460 aa12.12□□□□□ -0.47
BEST1-201ENST00000378043 SYF2O95926 243 aaKnown RBP12.12□□□□□ -0.47
BEST1-201ENST00000378043 C2orf54Q08AI8 447 aa12.12□□□□□ -0.47
BEST1-201ENST00000378043 HGSNATQ68CP4 663 aa12.12□□□□□ -0.47
BEST1-201ENST00000378043 PPP1R18Q6NYC8 613 aa12.12□□□□□ -0.47
BEST1-201ENST00000378043 FOXR2Q6PJQ5 311 aa12.12□□□□□ -0.47
BEST1-201ENST00000378043 KCTD1Q719H9 257 aa12.12□□□□□ -0.47
BEST1-201ENST00000378043 TRIM58Q8NG06 486 aa12.12□□□□□ -0.47
BEST1-201ENST00000378043 UIMC1Q96RL1 719 aa12.12□□□□□ -0.47
BEST1-201ENST00000378043 CRAMP1Q96RY5 1269 aa12.12□□□□□ -0.47
BEST1-201ENST00000378043 KLRG2A4D1S0 409 aaPredicted RBP12.12□□□□□ -0.47
BEST1-201ENST00000378043 MUM1L1Q5H9M0 696 aa12.12□□□□□ -0.47
BEST1-201ENST00000378043 GSPT2Q8IYD1 628 aaKnown RBP12.12□□□□□ -0.47
BEST1-201ENST00000378043 MYOCDQ8IZQ8 938 aa12.12□□□□□ -0.47
BEST1-201ENST00000378043 CCDC102AQ96A19 550 aa12.12□□□□□ -0.47
BEST1-201ENST00000378043 GDAP1L1Q96MZ0 367 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 195.9 ms