RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 FAM184BQ9ULE4 1060 aa11.31□□□□□ -0.6
C9orf85-202ENST00000377027 CNPY2Q9Y2B0 182 aa11.31□□□□□ -0.6
C9orf85-202ENST00000377027 ASGR1P07306 291 aa11.3□□□□□ -0.6
C9orf85-202ENST00000377027 STAT2P52630 851 aa11.3□□□□□ -0.6
C9orf85-202ENST00000377027 PDE1AP54750 535 aa11.3□□□□□ -0.6
C9orf85-202ENST00000377027 GJA9P57773 515 aa11.3□□□□□ -0.6
C9orf85-202ENST00000377027 NKX3-2P78367 333 aa11.3□□□□□ -0.6
C9orf85-202ENST00000377027 PDE4BQ07343 736 aa11.3□□□□□ -0.6
C9orf85-202ENST00000377027 LAPTM4AQ15012 233 aa11.3□□□□□ -0.6
C9orf85-202ENST00000377027 TTBK2Q6IQ55 1244 aa11.3□□□□□ -0.6
C9orf85-202ENST00000377027 C16orf59Q7L2K0 433 aa11.3□□□□□ -0.6
C9orf85-202ENST00000377027 ANKRD35Q8N283 1001 aa11.3□□□□□ -0.6
C9orf85-202ENST00000377027 STAG1Q8WVM7 1258 aa11.3□□□□□ -0.6
C9orf85-202ENST00000377027 GPKOWQ92917 476 aaPredicted RBP eCLIP11.3□□□□□ -0.6
C9orf85-202ENST00000377027 FOXJ1Q92949 421 aa11.3□□□□□ -0.6
C9orf85-202ENST00000377027 SEMA6BQ9H3T3 888 aa11.3□□□□□ -0.6
C9orf85-202ENST00000377027 STARD7Q9NQZ5 370 aa11.3□□□□□ -0.6
C9orf85-202ENST00000377027 RNF146Q9NTX7 359 aa11.3□□□□□ -0.6
C9orf85-202ENST00000377027 PRR12Q9ULL5 1215 aa11.3□□□□□ -0.6
C9orf85-202ENST00000377027 GNEQ9Y223 722 aaKnown RBP11.3□□□□□ -0.6
C9orf85-202ENST00000377027 GRIN2DO15399 1336 aa11.3□□□□□ -0.6
C9orf85-202ENST00000377027 NRG2O14511 850 aaPredicted RBP11.29□□□□□ -0.6
C9orf85-202ENST00000377027 PLA2G6O60733 806 aa11.29□□□□□ -0.6
C9orf85-202ENST00000377027 SMAD3P84022 425 aaKnown RBP11.29□□□□□ -0.6
C9orf85-202ENST00000377027 BEX3Q00994 111 aa11.29□□□□□ -0.6
C9orf85-202ENST00000377027 ANKRD45Q5TZF3 282 aa11.29□□□□□ -0.6
C9orf85-202ENST00000377027 RCSD1Q6JBY9 416 aa11.29□□□□□ -0.6
C9orf85-202ENST00000377027 CCDC174Q6PII3 467 aa11.29□□□□□ -0.6
C9orf85-202ENST00000377027 EHBP1Q8NDI1 1231 aa11.29□□□□□ -0.6
C9orf85-202ENST00000377027 TOX2Q96NM4 488 aa11.29□□□□□ -0.6
C9orf85-202ENST00000377027 CDX2Q99626 313 aaPredicted RBP11.29□□□□□ -0.6
C9orf85-202ENST00000377027 NACAP1Q9BZK3 213 aa11.29□□□□□ -0.6
C9orf85-202ENST00000377027 ABHD16BQ9H3Z7 469 aa11.29□□□□□ -0.6
C9orf85-202ENST00000377027 ACAD9Q9H845 621 aa11.29□□□□□ -0.6
C9orf85-202ENST00000377027 ZNF287Q9HBT7 754 aa11.29□□□□□ -0.6
C9orf85-202ENST00000377027 PDGFCQ9NRA1 345 aa11.29□□□□□ -0.6
C9orf85-202ENST00000377027 TOR4AQ9NXH8 423 aa11.29□□□□□ -0.6
C9orf85-202ENST00000377027 FBXO40Q9UH90 709 aa11.29□□□□□ -0.6
C9orf85-202ENST00000377027 STX8Q9UNK0 236 aa11.29□□□□□ -0.6
C9orf85-202ENST00000377027 SCN5AQ14524 2016 aa11.29□□□□□ -0.6
C9orf85-202ENST00000377027 ORC4O43929 436 aa11.28□□□□□ -0.6
C9orf85-202ENST00000377027 FGAP02671 866 aa11.28□□□□□ -0.6
C9orf85-202ENST00000377027 C6orf222P0C671 652 aaPredicted RBP11.28□□□□□ -0.6
C9orf85-202ENST00000377027 SLC16A2P36021 539 aa11.28□□□□□ -0.6
C9orf85-202ENST00000377027 SLC1A4P43007 532 aa11.28□□□□□ -0.6
C9orf85-202ENST00000377027 NMIQ13287 307 aaPredicted RBP11.28□□□□□ -0.6
C9orf85-202ENST00000377027 HDAC1Q13547 482 aaPredicted RBP11.28□□□□□ -0.6
C9orf85-202ENST00000377027 ALX1Q15699 326 aa11.28□□□□□ -0.6
C9orf85-202ENST00000377027 TAPT1Q6NXT6 567 aa11.28□□□□□ -0.6
C9orf85-202ENST00000377027 FAM160B2Q86V87 743 aa11.28□□□□□ -0.6
C9orf85-202ENST00000377027 TBC1D10CQ8IV04 446 aa11.28□□□□□ -0.6
C9orf85-202ENST00000377027 FAM126BQ8IXS8 530 aa11.28□□□□□ -0.6
C9orf85-202ENST00000377027 SLC43A3Q8NBI5 491 aa11.28□□□□□ -0.6
C9orf85-202ENST00000377027 MYLIPQ8WY64 445 aa11.28□□□□□ -0.6
C9orf85-202ENST00000377027 VWCEQ96DN2 955 aa11.28□□□□□ -0.6
C9orf85-202ENST00000377027 TRERF1Q96PN7 1200 aa11.28□□□□□ -0.6
C9orf85-202ENST00000377027 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.28□□□□□ -0.6
C9orf85-202ENST00000377027 RANBP17Q9H2T7 1088 aaKnown RBP11.28□□□□□ -0.6
C9orf85-202ENST00000377027 TMEM39AQ9NV64 488 aa11.28□□□□□ -0.6
C9orf85-202ENST00000377027 CYP39A1Q9NYL5 469 aa11.28□□□□□ -0.6
C9orf85-202ENST00000377027 SCN10AQ9Y5Y9 1956 aa11.28□□□□□ -0.6
C9orf85-202ENST00000377027 UMODL1Q5DID0 1318 aa11.28□□□□□ -0.6
C9orf85-202ENST00000377027 TANC1Q9C0D5 1861 aa11.27□□□□□ -0.6
C9orf85-202ENST00000377027 MYH6P13533 1939 aa11.27□□□□□ -0.6
C9orf85-202ENST00000377027 PTPRSQ13332 1948 aa11.27□□□□□ -0.6
C9orf85-202ENST00000377027 TSPY2A6NKD2 308 aa11.27□□□□□ -0.61
C9orf85-202ENST00000377027 RBAK-RBAKDNI3L0D1 243 aa11.27□□□□□ -0.61
C9orf85-202ENST00000377027 NFIBO00712 420 aa11.27□□□□□ -0.61
C9orf85-202ENST00000377027 SIAH2O43255 324 aa11.27□□□□□ -0.61
C9orf85-202ENST00000377027 TIMP1P01033 207 aa11.27□□□□□ -0.61
C9orf85-202ENST00000377027 CD4P01730 458 aa11.27□□□□□ -0.61
C9orf85-202ENST00000377027 HSPD1P10809 573 aaKnown RBP11.27□□□□□ -0.61
C9orf85-202ENST00000377027 ALAS1P13196 640 aa11.27□□□□□ -0.61
C9orf85-202ENST00000377027 RAG1P15918 1043 aa11.27□□□□□ -0.61
C9orf85-202ENST00000377027 SMPD1P17405 629 aa11.27□□□□□ -0.61
C9orf85-202ENST00000377027 VARSP26640 1264 aaKnown RBP11.27□□□□□ -0.61
C9orf85-202ENST00000377027 FPGSQ05932 587 aa11.27□□□□□ -0.61
C9orf85-202ENST00000377027 LRRFIP1Q32MZ4 808 aaKnown RBP11.27□□□□□ -0.61
C9orf85-202ENST00000377027 C4orf48Q5BLP8 95 aa11.27□□□□□ -0.61
C9orf85-202ENST00000377027 RASIP1Q5U651 963 aa11.27□□□□□ -0.61
C9orf85-202ENST00000377027 PDXDC2PQ6P474 469 aa11.27□□□□□ -0.61
C9orf85-202ENST00000377027 BTNL9Q6UXG8 535 aa11.27□□□□□ -0.61
C9orf85-202ENST00000377027 BPHLQ86WA6 291 aaPredicted RBP11.27□□□□□ -0.61
C9orf85-202ENST00000377027 FBXO16Q8IX29 292 aaPredicted RBP11.27□□□□□ -0.61
C9orf85-202ENST00000377027 MORC4Q8TE76 937 aa11.27□□□□□ -0.61
C9orf85-202ENST00000377027 EVI5LQ96CN4 794 aa11.27□□□□□ -0.61
C9orf85-202ENST00000377027 RNPC3Q96LT9 517 aaKnown RBP11.27□□□□□ -0.61
C9orf85-202ENST00000377027 TMEM47Q9BQJ4 181 aa11.27□□□□□ -0.61
C9orf85-202ENST00000377027 COL25A1Q9BXS0 654 aaPredicted RBP11.27□□□□□ -0.61
C9orf85-202ENST00000377027 HELLSQ9NRZ9 838 aa11.27□□□□□ -0.61
C9orf85-202ENST00000377027 MTMR7Q9Y216 660 aa11.27□□□□□ -0.61
C9orf85-202ENST00000377027 ELP1O95163 1332 aa11.27□□□□□ -0.61
C9orf85-202ENST00000377027 ZMYM6O95789 1325 aa11.27□□□□□ -0.61
C9orf85-202ENST00000377027 ARVCFO00192 962 aa11.26□□□□□ -0.61
C9orf85-202ENST00000377027 RANBP6O60518 1105 aaKnown RBP11.26□□□□□ -0.61
C9orf85-202ENST00000377027 HAND2P61296 217 aa11.26□□□□□ -0.61
C9orf85-202ENST00000377027 GNASQ5JWF2 1037 aa11.26□□□□□ -0.61
C9orf85-202ENST00000377027 TMEM240Q5SV17 173 aa11.26□□□□□ -0.61
C9orf85-202ENST00000377027 MFSD5Q6N075 450 aa11.26□□□□□ -0.61
C9orf85-202ENST00000377027 SLC30A10Q6XR72 485 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms