RNA–Protein interactions for RNA: ENST00000376895.2

SSX3-203, Transcript of SSX family member 3, humanhuman

TSL 5

Gene SSX3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-203ENST00000376895 UBR7Q8N806 425 aa7.24□□□□□ -1.25
SSX3-203ENST00000376895 TMEM145Q8NBT3 493 aa7.24□□□□□ -1.25
SSX3-203ENST00000376895 SLC7A14Q8TBB6 771 aa7.24□□□□□ -1.25
SSX3-203ENST00000376895 SCARF2Q96GP6 870 aaPredicted RBP7.24□□□□□ -1.25
SSX3-203ENST00000376895 FAM126AQ9BYI3 521 aaPredicted RBP7.24□□□□□ -1.25
SSX3-203ENST00000376895 CYP26B1Q9NR63 512 aa7.24□□□□□ -1.25
SSX3-203ENST00000376895 GTF2IRD1Q9UHL9 959 aa7.24□□□□□ -1.25
SSX3-203ENST00000376895 NKTRP30414 1462 aaKnown RBP7.24□□□□□ -1.25
SSX3-203ENST00000376895 CPS1P31327 1500 aa7.23□□□□□ -1.25
SSX3-203ENST00000376895 ALG1L2C9J202 215 aa7.23□□□□□ -1.25
SSX3-203ENST00000376895 DHX15O43143 795 aaKnown RBP7.23□□□□□ -1.25
SSX3-203ENST00000376895 WIPF1O43516 503 aa7.23□□□□□ -1.25
SSX3-203ENST00000376895 OPA1O60313 960 aa7.23□□□□□ -1.25
SSX3-203ENST00000376895 LRRN2O75325 713 aa7.23□□□□□ -1.25
SSX3-203ENST00000376895 PRAMEF1O95521 474 aa7.23□□□□□ -1.25
SSX3-203ENST00000376895 CBX7O95931 251 aa7.23□□□□□ -1.25
SSX3-203ENST00000376895 ASLP04424 464 aa7.23□□□□□ -1.25
SSX3-203ENST00000376895 GSNP06396 782 aa7.23□□□□□ -1.25
SSX3-203ENST00000376895 POU3F3P20264 500 aaPredicted RBP7.23□□□□□ -1.25
SSX3-203ENST00000376895 COL8A1P27658 744 aa7.23□□□□□ -1.25
SSX3-203ENST00000376895 IGFALSP35858 605 aa7.23□□□□□ -1.25
SSX3-203ENST00000376895 SF1Q15637 639 aaKnown RBP7.23□□□□□ -1.25
SSX3-203ENST00000376895 BEND4Q6ZU67 534 aa7.23□□□□□ -1.25
SSX3-203ENST00000376895 USP53Q70EK8 1073 aa7.23□□□□□ -1.25
SSX3-203ENST00000376895 NOL8Q76FK4 1167 aaKnown RBP7.23□□□□□ -1.25
SSX3-203ENST00000376895 DDX42Q86XP3 938 aaKnown RBP eCLIP7.23□□□□□ -1.25
SSX3-203ENST00000376895 NGDNQ8NEJ9 315 aaKnown RBP7.23□□□□□ -1.25
SSX3-203ENST00000376895 Q96M66 194 aa7.23□□□□□ -1.25
SSX3-203ENST00000376895 SLC12A5Q9H2X9 1139 aa7.23□□□□□ -1.25
SSX3-203ENST00000376895 PANK3Q9H999 370 aa7.23□□□□□ -1.25
SSX3-203ENST00000376895 KNSTRNQ9Y448 316 aa7.23□□□□□ -1.25
SSX3-203ENST00000376895 SETD1AO15047 1707 aaKnown RBP7.23□□□□□ -1.25
SSX3-203ENST00000376895 CHD2O14647 1828 aaKnown RBP7.22□□□□□ -1.25
SSX3-203ENST00000376895 NINLQ9Y2I6 1382 aa7.22□□□□□ -1.25
SSX3-203ENST00000376895 VAMP4O75379 141 aa7.22□□□□□ -1.25
SSX3-203ENST00000376895 LEFTY1O75610 366 aa7.22□□□□□ -1.25
SSX3-203ENST00000376895 FLT3P36888 993 aa7.22□□□□□ -1.25
SSX3-203ENST00000376895 ECI1P42126 302 aa7.22□□□□□ -1.25
SSX3-203ENST00000376895 SCRN1Q12765 414 aa7.22□□□□□ -1.25
SSX3-203ENST00000376895 NTRK3Q16288 839 aa7.22□□□□□ -1.25
SSX3-203ENST00000376895 CLEC16AQ2KHT3 1053 aa7.22□□□□□ -1.25
SSX3-203ENST00000376895 DPY19L1Q2PZI1 675 aa7.22□□□□□ -1.25
SSX3-203ENST00000376895 ODR4Q5SWX8 454 aa7.22□□□□□ -1.25
SSX3-203ENST00000376895 SLC35F1Q5T1Q4 408 aa7.22□□□□□ -1.25
SSX3-203ENST00000376895 MFSD4AQ8N468 514 aa7.22□□□□□ -1.25
SSX3-203ENST00000376895 AFAP1L2Q8N4X5 818 aa7.22□□□□□ -1.25
SSX3-203ENST00000376895 PIWIL2Q8TC59 973 aaKnown RBP7.22□□□□□ -1.25
SSX3-203ENST00000376895 DDX1Q92499 740 aaKnown RBP7.22□□□□□ -1.25
SSX3-203ENST00000376895 C1orf159Q96HA4 380 aa7.22□□□□□ -1.25
SSX3-203ENST00000376895 RNF112Q9ULX5 631 aa7.22□□□□□ -1.25
SSX3-203ENST00000376895 ADAMTS8Q9UP79 889 aa7.22□□□□□ -1.25
SSX3-203ENST00000376895 ADGRL3Q9HAR2 1447 aa7.21□□□□□ -1.25
SSX3-203ENST00000376895 BLACEA4D250 179 aa7.21□□□□□ -1.26
SSX3-203ENST00000376895 GNAT3A8MTJ3 354 aa7.21□□□□□ -1.26
SSX3-203ENST00000376895 STXBP3O00186 592 aa7.21□□□□□ -1.26
SSX3-203ENST00000376895 MEIS1O00470 390 aa7.21□□□□□ -1.26
SSX3-203ENST00000376895 AQP7O14520 342 aa7.21□□□□□ -1.26
SSX3-203ENST00000376895 NPTXRO95502 500 aa7.21□□□□□ -1.26
SSX3-203ENST00000376895 CD3EP07766 207 aa7.21□□□□□ -1.26
SSX3-203ENST00000376895 ZNF865P0CJ78 1059 aaPredicted RBP7.21□□□□□ -1.26
SSX3-203ENST00000376895 NAT1P18440 290 aa7.21□□□□□ -1.26
SSX3-203ENST00000376895 POU3F2P20265 443 aaPredicted RBP7.21□□□□□ -1.26
SSX3-203ENST00000376895 EXOSC10Q01780 885 aaKnown RBP7.21□□□□□ -1.26
SSX3-203ENST00000376895 PRSS53Q2L4Q9 553 aa7.21□□□□□ -1.26
SSX3-203ENST00000376895 CRTC3Q6UUV7 619 aa7.21□□□□□ -1.26
SSX3-203ENST00000376895 FGD2Q7Z6J4 655 aa7.21□□□□□ -1.26
SSX3-203ENST00000376895 CLEC10AQ8IUN9 316 aa7.21□□□□□ -1.26
SSX3-203ENST00000376895 ATL2Q8NHH9 583 aa7.21□□□□□ -1.26
SSX3-203ENST00000376895 DCAF4Q8WV16 495 aa7.21□□□□□ -1.26
SSX3-203ENST00000376895 MAGEB10Q96LZ2 347 aaPredicted RBP7.21□□□□□ -1.26
SSX3-203ENST00000376895 TBC1D32Q96NH3 1257 aa7.21□□□□□ -1.26
SSX3-203ENST00000376895 TNPO3Q9Y5L0 923 aaKnown RBP7.21□□□□□ -1.26
SSX3-203ENST00000376895 BACE2Q9Y5Z0 518 aa7.21□□□□□ -1.26
SSX3-203ENST00000376895 KNDC1Q76NI1 1749 aa7.21□□□□□ -1.26
SSX3-203ENST00000376895 XRN1Q8IZH2 1706 aaKnown RBP7.21□□□□□ -1.26
SSX3-203ENST00000376895 ARHGEF28Q8N1W1 1705 aaKnown RBP7.21□□□□□ -1.26
SSX3-203ENST00000376895 NWD1Q149M9 1564 aa7.2□□□□□ -1.26
SSX3-203ENST00000376895 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.2□□□□□ -1.26
SSX3-203ENST00000376895 B4E1Z4 1266 aa7.2□□□□□ -1.26
SSX3-203ENST00000376895 IGF2BP3O00425 579 aaKnown RBP eCLIP7.2□□□□□ -1.26
SSX3-203ENST00000376895 ANP32CO43423 234 aa7.2□□□□□ -1.26
SSX3-203ENST00000376895 TOM1O60784 492 aa7.2□□□□□ -1.26
SSX3-203ENST00000376895 EVA1CP58658 441 aa7.2□□□□□ -1.26
SSX3-203ENST00000376895 CYP27C1Q4G0S4 372 aa7.2□□□□□ -1.26
SSX3-203ENST00000376895 STYK1Q6J9G0 422 aa7.2□□□□□ -1.26
SSX3-203ENST00000376895 PKN3Q6P5Z2 889 aa7.2□□□□□ -1.26
SSX3-203ENST00000376895 DDX46Q7L014 1031 aaKnown RBP7.2□□□□□ -1.26
SSX3-203ENST00000376895 PPIL6Q8IXY8 311 aa7.2□□□□□ -1.26
SSX3-203ENST00000376895 ENOX1Q8TC92 643 aaKnown RBP7.2□□□□□ -1.26
SSX3-203ENST00000376895 LEO1Q8WVC0 666 aaPredicted RBP7.2□□□□□ -1.26
SSX3-203ENST00000376895 JDP2Q8WYK2 163 aa7.2□□□□□ -1.26
SSX3-203ENST00000376895 HDAC8Q9BY41 377 aa7.2□□□□□ -1.26
SSX3-203ENST00000376895 CAPN6Q9Y6Q1 641 aa7.2□□□□□ -1.26
SSX3-203ENST00000376895 LRRC7Q96NW7 1537 aa7.2□□□□□ -1.26
SSX3-203ENST00000376895 CNTNAP4Q9C0A0 1308 aa7.2□□□□□ -1.26
SSX3-203ENST00000376895 ANKARQ7Z5J8 1434 aa7.19□□□□□ -1.26
SSX3-203ENST00000376895 QRICH2Q9H0J4 1663 aa7.19□□□□□ -1.26
SSX3-203ENST00000376895 SHISA3A0PJX4 238 aa7.19□□□□□ -1.26
SSX3-203ENST00000376895 KPNA6O60684 536 aa7.19□□□□□ -1.26
SSX3-203ENST00000376895 PARNO95453 639 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms