RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 TDRD12Q587J7 1177 aaKnown RBP18.24■□□□□ 0.51
TRIM39-201ENST00000376656 HGSNATQ68CP4 663 aa18.24■□□□□ 0.51
TRIM39-201ENST00000376656 MAGEF1Q9HAY2 307 aa18.24■□□□□ 0.51
TRIM39-201ENST00000376656 ZNF804BA4D1E1 1349 aa18.24■□□□□ 0.51
TRIM39-201ENST00000376656 HPDP32754 393 aaPredicted RBP18.24■□□□□ 0.51
TRIM39-201ENST00000376656 ACTN3Q08043 901 aaPredicted RBP18.24■□□□□ 0.51
TRIM39-201ENST00000376656 CNNM4Q6P4Q7 775 aa18.24■□□□□ 0.51
TRIM39-201ENST00000376656 HEATR3Q7Z4Q2 680 aa18.24■□□□□ 0.51
TRIM39-201ENST00000376656 MAATS1Q7Z4T9 603 aa18.24■□□□□ 0.51
TRIM39-201ENST00000376656 PLAAQ9Y263 795 aa18.24■□□□□ 0.51
TRIM39-201ENST00000376656 CEP85LQ5SZL2 805 aa18.23■□□□□ 0.51
TRIM39-201ENST00000376656 CCDC13Q8IYE1 715 aa18.23■□□□□ 0.51
TRIM39-201ENST00000376656 ZKSCAN4Q969J2 545 aaPredicted RBP18.23■□□□□ 0.51
TRIM39-201ENST00000376656 TSKSQ9UJT2 592 aa18.23■□□□□ 0.51
TRIM39-201ENST00000376656 COL4A1P02462 1669 aa18.23■□□□□ 0.51
TRIM39-201ENST00000376656 PRPHP41219 470 aa18.23■□□□□ 0.51
TRIM39-201ENST00000376656 CCDC152Q4G0S7 254 aa18.23■□□□□ 0.51
TRIM39-201ENST00000376656 CACNA2D4Q7Z3S7 1137 aa18.23■□□□□ 0.51
TRIM39-201ENST00000376656 RNF10Q8N5U6 811 aaKnown RBP18.23■□□□□ 0.51
TRIM39-201ENST00000376656 NLRC4Q9NPP4 1024 aa18.23■□□□□ 0.51
TRIM39-201ENST00000376656 PPANQ9NQ55 473 aaKnown RBP18.23■□□□□ 0.51
TRIM39-201ENST00000376656 RREB1Q92766 1687 aa18.23■□□□□ 0.51
TRIM39-201ENST00000376656 FAM107AO95990 144 aa18.23■□□□□ 0.51
TRIM39-201ENST00000376656 PPP1R2P41236 205 aa18.23■□□□□ 0.51
TRIM39-201ENST00000376656 CCDC84Q86UT8 332 aaPredicted RBP18.23■□□□□ 0.51
TRIM39-201ENST00000376656 CENPHQ9H3R5 247 aa18.23■□□□□ 0.51
TRIM39-201ENST00000376656 DCP1AQ9NPI6 582 aaPredicted RBP18.23■□□□□ 0.51
TRIM39-201ENST00000376656 A1CFQ9NQ94 594 aaKnown RBP18.23■□□□□ 0.51
TRIM39-201ENST00000376656 RNF14Q9UBS8 474 aa18.23■□□□□ 0.51
TRIM39-201ENST00000376656 MTMR7Q9Y216 660 aa18.23■□□□□ 0.51
TRIM39-201ENST00000376656 HMGB1P1B2RPK0 211 aaPredicted RBP18.22■□□□□ 0.51
TRIM39-201ENST00000376656 CCDC40Q4G0X9 1142 aa18.22■□□□□ 0.51
TRIM39-201ENST00000376656 KLC4Q9NSK0 619 aa18.22■□□□□ 0.51
TRIM39-201ENST00000376656 LAD1O00515 517 aa18.22■□□□□ 0.51
TRIM39-201ENST00000376656 RAD51CO43502 376 aa18.22■□□□□ 0.51
TRIM39-201ENST00000376656 OR52Z1P0C646 297 aa18.22■□□□□ 0.51
TRIM39-201ENST00000376656 TECP42680 631 aa18.22■□□□□ 0.51
TRIM39-201ENST00000376656 MMTAG2Q9BU76 263 aaKnown RBP18.22■□□□□ 0.51
TRIM39-201ENST00000376656 LETM2Q2VYF4 491 aa18.21■□□□□ 0.51
TRIM39-201ENST00000376656 C6orf89Q6UWU4 347 aa18.21■□□□□ 0.51
TRIM39-201ENST00000376656 WHAMMQ8TF30 809 aa18.21■□□□□ 0.51
TRIM39-201ENST00000376656 AK8Q96MA6 479 aa18.21■□□□□ 0.51
TRIM39-201ENST00000376656 SSU72P8A0A1W2PR75 194 aa18.21■□□□□ 0.51
TRIM39-201ENST00000376656 CYTH3O43739 400 aa18.21■□□□□ 0.51
TRIM39-201ENST00000376656 CCNT1O60563 726 aaKnown RBP18.21■□□□□ 0.51
TRIM39-201ENST00000376656 SMTNP53814 917 aa18.21■□□□□ 0.51
TRIM39-201ENST00000376656 CDC37Q16543 378 aaPredicted RBP18.21■□□□□ 0.51
TRIM39-201ENST00000376656 KLHL7Q8IXQ5 586 aa18.21■□□□□ 0.51
TRIM39-201ENST00000376656 PNMA1Q8ND90 353 aa18.21■□□□□ 0.51
TRIM39-201ENST00000376656 OR2W6PQ8NHA6 318 aa18.21■□□□□ 0.51
TRIM39-201ENST00000376656 CYFIP2Q96F07 1278 aa18.21■□□□□ 0.51
TRIM39-201ENST00000376656 INPP4AQ96PE3 977 aaPredicted RBP18.21■□□□□ 0.51
TRIM39-201ENST00000376656 TMBIM4Q9HC24 238 aa18.21■□□□□ 0.51
TRIM39-201ENST00000376656 STXBP3O00186 592 aa18.21■□□□□ 0.51
TRIM39-201ENST00000376656 TLR2O60603 784 aa18.21■□□□□ 0.51
TRIM39-201ENST00000376656 RASSF9O75901 435 aa18.21■□□□□ 0.51
TRIM39-201ENST00000376656 CCDC172P0C7W6 258 aa18.21■□□□□ 0.51
TRIM39-201ENST00000376656 KLRC1P26715 233 aa18.21■□□□□ 0.51
TRIM39-201ENST00000376656 EHHADHQ08426 723 aa18.21■□□□□ 0.51
TRIM39-201ENST00000376656 KCNMA1Q12791 1236 aa18.21■□□□□ 0.51
TRIM39-201ENST00000376656 COBLL1Q53SF7 1204 aa18.21■□□□□ 0.51
TRIM39-201ENST00000376656 CHUKO15111 745 aa18.2■□□□□ 0.5
TRIM39-201ENST00000376656 HSPA9P38646 679 aaKnown RBP18.2■□□□□ 0.5
TRIM39-201ENST00000376656 DAGLBQ8NCG7 672 aa18.2■□□□□ 0.5
TRIM39-201ENST00000376656 TANGO6Q9C0B7 1094 aa18.2■□□□□ 0.5
TRIM39-201ENST00000376656 SLC40A1Q9NP59 571 aa18.2■□□□□ 0.5
TRIM39-201ENST00000376656 CASZ1Q86V15 1759 aa18.2■□□□□ 0.5
TRIM39-201ENST00000376656 RBAK-RBAKDNI3L0D1 243 aa18.2■□□□□ 0.5
TRIM39-201ENST00000376656 CLSTN1O94985 981 aa18.2■□□□□ 0.5
TRIM39-201ENST00000376656 IL6STP40189 918 aaPredicted RBP18.2■□□□□ 0.5
TRIM39-201ENST00000376656 AMPD3Q01432 767 aa18.2■□□□□ 0.5
TRIM39-201ENST00000376656 DYMQ7RTS9 669 aa18.2■□□□□ 0.5
TRIM39-201ENST00000376656 TEX2Q8IWB9 1127 aa18.2■□□□□ 0.5
TRIM39-201ENST00000376656 C1orf131Q8NDD1 294 aaKnown RBP18.2■□□□□ 0.5
TRIM39-201ENST00000376656 IL17RBQ9NRM6 502 aa18.2■□□□□ 0.5
TRIM39-201ENST00000376656 MAD2L2Q9UI95 211 aa18.2■□□□□ 0.5
TRIM39-201ENST00000376656 ITGB4P16144 1822 aa18.2■□□□□ 0.5
TRIM39-201ENST00000376656 MYMKA6NI61 221 aa18.2■□□□□ 0.5
TRIM39-201ENST00000376656 KCTD19Q17RG1 926 aaPredicted RBP18.2■□□□□ 0.5
TRIM39-201ENST00000376656 SPRED3Q2MJR0 410 aa18.2■□□□□ 0.5
TRIM39-201ENST00000376656 MEI1Q5TIA1 1274 aa18.2■□□□□ 0.5
TRIM39-201ENST00000376656 PPP4R3AQ6IN85 833 aa18.2■□□□□ 0.5
TRIM39-201ENST00000376656 TFAP4Q01664 338 aa18.19■□□□□ 0.5
TRIM39-201ENST00000376656 NAB2Q15742 525 aa18.19■□□□□ 0.5
TRIM39-201ENST00000376656 LRRC55Q6ZSA7 311 aa18.19■□□□□ 0.5
TRIM39-201ENST00000376656 GLIS3Q8NEA6 775 aa18.19■□□□□ 0.5
TRIM39-201ENST00000376656 GRID2IPA4D2P6 1211 aa18.19■□□□□ 0.5
TRIM39-201ENST00000376656 EVA1CP58658 441 aa18.19■□□□□ 0.5
TRIM39-201ENST00000376656 ERVK-9P63128 1117 aa18.19■□□□□ 0.5
TRIM39-201ENST00000376656 HLTFQ14527 1009 aaKnown RBP eCLIP18.19■□□□□ 0.5
TRIM39-201ENST00000376656 NSUN4Q96CB9 384 aaKnown RBP18.19■□□□□ 0.5
TRIM39-201ENST00000376656 BARHL2Q9NY43 387 aa18.19■□□□□ 0.5
TRIM39-201ENST00000376656 GGA2Q9UJY4 613 aa18.19■□□□□ 0.5
TRIM39-201ENST00000376656 HSD17B3P37058 310 aa18.18■□□□□ 0.5
TRIM39-201ENST00000376656 LRRC41Q15345 812 aa18.18■□□□□ 0.5
TRIM39-201ENST00000376656 SLC9C1Q4G0N8 1177 aa18.18■□□□□ 0.5
TRIM39-201ENST00000376656 TMED8Q6PL24 325 aaPredicted RBP18.18■□□□□ 0.5
TRIM39-201ENST00000376656 PROCA1Q8NCQ7 364 aaPredicted RBP18.18■□□□□ 0.5
TRIM39-201ENST00000376656 PACSIN1Q9BY11 444 aa18.18■□□□□ 0.5
TRIM39-201ENST00000376656 RDXP35241 583 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms