RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 CCDC65Q8IXS2 484 aa15.87■□□□□ 0.13
TNFRSF1B-201ENST00000376259 DYDC1Q8WWB3 177 aa15.87■□□□□ 0.13
TNFRSF1B-201ENST00000376259 ZC3H12CQ9C0D7 883 aaKnown RBP15.87■□□□□ 0.13
TNFRSF1B-201ENST00000376259 DDX25Q9UHL0 483 aaKnown RBP15.87■□□□□ 0.13
TNFRSF1B-201ENST00000376259 PDE2AO00408 941 aaPredicted RBP15.87■□□□□ 0.13
TNFRSF1B-201ENST00000376259 PALMO75781 387 aa15.87■□□□□ 0.13
TNFRSF1B-201ENST00000376259 GJC1P36383 396 aa15.87■□□□□ 0.13
TNFRSF1B-201ENST00000376259 GRIK5Q16478 980 aa15.87■□□□□ 0.13
TNFRSF1B-201ENST00000376259 ARL6IP4Q66PJ3 421 aaKnown RBP15.87■□□□□ 0.13
TNFRSF1B-201ENST00000376259 SLC30A10Q6XR72 485 aa15.87■□□□□ 0.13
TNFRSF1B-201ENST00000376259 U2AF1L4Q8WU68 220 aaKnown RBP15.87■□□□□ 0.13
TNFRSF1B-201ENST00000376259 TMEM51Q9NW97 253 aa15.87■□□□□ 0.13
TNFRSF1B-201ENST00000376259 MYO1AQ9UBC5 1043 aa15.87■□□□□ 0.13
TNFRSF1B-201ENST00000376259 CAPN11Q9UMQ6 739 aa15.87■□□□□ 0.13
TNFRSF1B-201ENST00000376259 RPS6KA1Q15418 735 aa15.87■□□□□ 0.13
TNFRSF1B-201ENST00000376259 DAAM2Q86T65 1068 aa15.87■□□□□ 0.13
TNFRSF1B-201ENST00000376259 SRLQ86TD4 932 aa15.87■□□□□ 0.13
TNFRSF1B-201ENST00000376259 SPATA4Q8NEY3 305 aa15.87■□□□□ 0.13
TNFRSF1B-201ENST00000376259 THAP9Q9H5L6 903 aa15.87■□□□□ 0.13
TNFRSF1B-201ENST00000376259 MYMKA6NI61 221 aa15.86■□□□□ 0.13
TNFRSF1B-201ENST00000376259 ERLIN2O94905 339 aa15.86■□□□□ 0.13
TNFRSF1B-201ENST00000376259 IFT20Q8IY31 132 aa15.86■□□□□ 0.13
TNFRSF1B-201ENST00000376259 PSTPIP2Q9H939 334 aa15.86■□□□□ 0.13
TNFRSF1B-201ENST00000376259 JRKLQ9Y4A0 524 aa15.86■□□□□ 0.13
TNFRSF1B-201ENST00000376259 SEMA3EO15041 775 aa15.86■□□□□ 0.13
TNFRSF1B-201ENST00000376259 BUB1BO60566 1050 aaPredicted RBP15.86■□□□□ 0.13
TNFRSF1B-201ENST00000376259 MRPL12P52815 198 aaKnown RBP15.86■□□□□ 0.13
TNFRSF1B-201ENST00000376259 NT5DC1Q5TFE4 455 aa15.86■□□□□ 0.13
TNFRSF1B-201ENST00000376259 KIAA0825Q8IV33 1275 aa15.86■□□□□ 0.13
TNFRSF1B-201ENST00000376259 OSBPL9Q96SU4 736 aa15.86■□□□□ 0.13
TNFRSF1B-201ENST00000376259 MXD3Q9BW11 206 aa15.86■□□□□ 0.13
TNFRSF1B-201ENST00000376259 NR2F2P24468 414 aa15.86■□□□□ 0.13
TNFRSF1B-201ENST00000376259 MAN2A1Q16706 1144 aa15.86■□□□□ 0.13
TNFRSF1B-201ENST00000376259 TRAPPC3LQ5T215 181 aa15.86■□□□□ 0.13
TNFRSF1B-201ENST00000376259 SPDYE3A6NKU9 549 aa15.85■□□□□ 0.13
TNFRSF1B-201ENST00000376259 PRPF6O94906 941 aaKnown RBP15.85■□□□□ 0.13
TNFRSF1B-201ENST00000376259 ACTN1P12814 892 aa15.85■□□□□ 0.13
TNFRSF1B-201ENST00000376259 CYP2J2P51589 502 aa15.85■□□□□ 0.13
TNFRSF1B-201ENST00000376259 TUBB4BP68371 445 aa15.85■□□□□ 0.13
TNFRSF1B-201ENST00000376259 SP4Q02446 784 aa15.85■□□□□ 0.13
TNFRSF1B-201ENST00000376259 GGA1Q9UJY5 639 aa15.85■□□□□ 0.13
TNFRSF1B-201ENST00000376259 POTEB3A0JP26 581 aa15.85■□□□□ 0.13
TNFRSF1B-201ENST00000376259 POTECB2RU33 542 aa15.85■□□□□ 0.13
TNFRSF1B-201ENST00000376259 EPHB6O15197 1021 aa15.85■□□□□ 0.13
TNFRSF1B-201ENST00000376259 TCP1P17987 556 aaKnown RBP15.85■□□□□ 0.13
TNFRSF1B-201ENST00000376259 NNTQ13423 1086 aa15.85■□□□□ 0.13
TNFRSF1B-201ENST00000376259 POTEBQ6S5H4 581 aa15.85■□□□□ 0.13
TNFRSF1B-201ENST00000376259 PTF1AQ7RTS3 328 aa15.85■□□□□ 0.13
TNFRSF1B-201ENST00000376259 PEX26Q7Z412 305 aa15.85■□□□□ 0.13
TNFRSF1B-201ENST00000376259 TICAM2Q86XR7 235 aa15.85■□□□□ 0.13
TNFRSF1B-201ENST00000376259 SCLT1Q96NL6 688 aa15.85■□□□□ 0.13
TNFRSF1B-201ENST00000376259 IL17RBQ9NRM6 502 aa15.85■□□□□ 0.13
TNFRSF1B-201ENST00000376259 NKRFO15226 690 aaKnown RBP eCLIP15.84■□□□□ 0.13
TNFRSF1B-201ENST00000376259 TAL1P17542 331 aaPredicted RBP15.84■□□□□ 0.13
TNFRSF1B-201ENST00000376259 PPFIA1Q13136 1202 aa15.84■□□□□ 0.13
TNFRSF1B-201ENST00000376259 C12orf60Q5U649 245 aa15.84■□□□□ 0.13
TNFRSF1B-201ENST00000376259 CPLX4Q7Z7G2 160 aa15.84■□□□□ 0.13
TNFRSF1B-201ENST00000376259 DGKHQ86XP1 1220 aa15.84■□□□□ 0.13
TNFRSF1B-201ENST00000376259 DDX42Q86XP3 938 aaKnown RBP eCLIP15.84■□□□□ 0.13
TNFRSF1B-201ENST00000376259 OR2W6PQ8NHA6 318 aa15.84■□□□□ 0.13
TNFRSF1B-201ENST00000376259 RBM12Q9NTZ6 932 aaKnown RBP15.84■□□□□ 0.13
TNFRSF1B-201ENST00000376259 USP40Q9NVE5 1235 aa15.84■□□□□ 0.13
TNFRSF1B-201ENST00000376259 BARHL2Q9NY43 387 aa15.84■□□□□ 0.13
TNFRSF1B-201ENST00000376259 REXO2Q9Y3B8 237 aaKnown RBP15.84■□□□□ 0.13
TNFRSF1B-201ENST00000376259 CYTH3O43739 400 aa15.84■□□□□ 0.13
TNFRSF1B-201ENST00000376259 PPP1R12BO60237 982 aaPredicted RBP15.84■□□□□ 0.13
TNFRSF1B-201ENST00000376259 LRRN2O75325 713 aa15.84■□□□□ 0.13
TNFRSF1B-201ENST00000376259 CFBP00751 764 aa15.84■□□□□ 0.13
TNFRSF1B-201ENST00000376259 HLA-DOAP06340 250 aa15.84■□□□□ 0.13
TNFRSF1B-201ENST00000376259 GUCY1A3Q02108 690 aa15.84■□□□□ 0.13
TNFRSF1B-201ENST00000376259 TPH2Q8IWU9 490 aa15.84■□□□□ 0.13
TNFRSF1B-201ENST00000376259 HOXA13P31271 388 aaPredicted RBP15.84■□□□□ 0.13
TNFRSF1B-201ENST00000376259 TNNC1P63316 161 aa15.84■□□□□ 0.13
TNFRSF1B-201ENST00000376259 IFT88Q13099 833 aa15.84■□□□□ 0.13
TNFRSF1B-201ENST00000376259 KRT71Q3SY84 523 aa15.84■□□□□ 0.13
TNFRSF1B-201ENST00000376259 NUDT12Q9BQG2 462 aa15.84■□□□□ 0.13
TNFRSF1B-201ENST00000376259 MKRN1Q9UHC7 482 aaKnown RBP15.84■□□□□ 0.13
TNFRSF1B-201ENST00000376259 HPCAL4Q9UM19 191 aa15.84■□□□□ 0.13
TNFRSF1B-201ENST00000376259 PCDHA1Q9Y5I3 950 aa15.84■□□□□ 0.13
TNFRSF1B-201ENST00000376259 FAM237AA0A1B0GTK4 181 aa15.83■□□□□ 0.13
TNFRSF1B-201ENST00000376259 SRGNP10124 158 aa15.83■□□□□ 0.13
TNFRSF1B-201ENST00000376259 CTNNA1P35221 906 aaKnown RBP15.83■□□□□ 0.13
TNFRSF1B-201ENST00000376259 CARSP49589 748 aaKnown RBP15.83■□□□□ 0.13
TNFRSF1B-201ENST00000376259 ADCY1Q08828 1119 aa15.83■□□□□ 0.13
TNFRSF1B-201ENST00000376259 CCDC114Q96M63 670 aa15.83■□□□□ 0.13
TNFRSF1B-201ENST00000376259 FAM184BQ9ULE4 1060 aa15.83■□□□□ 0.13
TNFRSF1B-201ENST00000376259 CTDP1Q9Y5B0 961 aaPredicted RBP15.83■□□□□ 0.13
TNFRSF1B-201ENST00000376259 MRRFQ96E11 262 aaKnown RBP15.83■□□□□ 0.12
TNFRSF1B-201ENST00000376259 KRIT1O00522 736 aa15.83■□□□□ 0.12
TNFRSF1B-201ENST00000376259 FAM13AO94988 1023 aa15.83■□□□□ 0.12
TNFRSF1B-201ENST00000376259 TTI2Q6NXR4 508 aa15.83■□□□□ 0.12
TNFRSF1B-201ENST00000376259 FAM196AQ6ZSG2 479 aa15.83■□□□□ 0.12
TNFRSF1B-201ENST00000376259 IRF2BP1Q8IU81 584 aa15.83■□□□□ 0.12
TNFRSF1B-201ENST00000376259 SH2D3AQ9BRG2 576 aa15.83■□□□□ 0.12
TNFRSF1B-201ENST00000376259 DDX47Q9H0S4 455 aaKnown RBP15.83■□□□□ 0.12
TNFRSF1B-201ENST00000376259 STIM2Q9P246 746 aa15.83■□□□□ 0.12
TNFRSF1B-201ENST00000376259 POTEFA5A3E0 1075 aa15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 SLC37A4O43826 429 aa15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 POTEIP0CG38 1075 aa15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 FKBP3Q00688 224 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms