RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 CYBAP13498 195 aa12.71□□□□□ -0.38
CSGALNACT2-201ENST00000374466 BAATQ14032 418 aaPredicted RBP12.71□□□□□ -0.38
CSGALNACT2-201ENST00000374466 KCTD2Q14681 263 aa12.71□□□□□ -0.38
CSGALNACT2-201ENST00000374466 CSPP1Q1MSJ5 1256 aa12.71□□□□□ -0.38
CSGALNACT2-201ENST00000374466 LINC00301Q8NCQ3 95 aa12.71□□□□□ -0.38
CSGALNACT2-201ENST00000374466 KCNG4Q8TDN1 519 aa12.71□□□□□ -0.38
CSGALNACT2-201ENST00000374466 ARMC5Q96C12 935 aa12.71□□□□□ -0.38
CSGALNACT2-201ENST00000374466 NUDT12Q9BQG2 462 aa12.71□□□□□ -0.38
CSGALNACT2-201ENST00000374466 PYM1Q9BRP8 204 aaKnown RBP12.71□□□□□ -0.38
CSGALNACT2-201ENST00000374466 VAV3Q9UKW4 847 aa12.71□□□□□ -0.38
CSGALNACT2-201ENST00000374466 RGS20O76081 388 aa12.7□□□□□ -0.38
CSGALNACT2-201ENST00000374466 HOXC8P31273 242 aa12.7□□□□□ -0.38
CSGALNACT2-201ENST00000374466 EARS2Q5JPH6 523 aaKnown RBP12.7□□□□□ -0.38
CSGALNACT2-201ENST00000374466 CCDC174Q6PII3 467 aa12.7□□□□□ -0.38
CSGALNACT2-201ENST00000374466 ANKRD13CQ8N6S4 541 aa12.7□□□□□ -0.38
CSGALNACT2-201ENST00000374466 SMCR8Q8TEV9 937 aaPredicted RBP12.7□□□□□ -0.38
CSGALNACT2-201ENST00000374466 LARP6Q9BRS8 491 aaKnown RBP12.7□□□□□ -0.38
CSGALNACT2-201ENST00000374466 TBC1D22BQ9NU19 505 aa12.7□□□□□ -0.38
CSGALNACT2-201ENST00000374466 ZNF865P0CJ78 1059 aaPredicted RBP12.7□□□□□ -0.38
CSGALNACT2-201ENST00000374466 XRCC6P12956 609 aaKnown RBP eCLIP12.7□□□□□ -0.38
CSGALNACT2-201ENST00000374466 ADORA2AP29274 412 aa12.7□□□□□ -0.38
CSGALNACT2-201ENST00000374466 CEP55Q53EZ4 464 aa12.7□□□□□ -0.38
CSGALNACT2-201ENST00000374466 AGO4Q9HCK5 861 aaKnown RBP12.7□□□□□ -0.38
CSGALNACT2-201ENST00000374466 KCNA2P16389 499 aa12.7□□□□□ -0.38
CSGALNACT2-201ENST00000374466 LONP1P36776 959 aaKnown RBP12.7□□□□□ -0.38
CSGALNACT2-201ENST00000374466 ZNF746Q6NUN9 644 aaPredicted RBP12.7□□□□□ -0.38
CSGALNACT2-201ENST00000374466 CCSER1Q9C0I3 900 aa12.7□□□□□ -0.38
CSGALNACT2-201ENST00000374466 MAGEF1Q9HAY2 307 aa12.7□□□□□ -0.38
CSGALNACT2-201ENST00000374466 EMSYQ7Z589 1322 aa12.69□□□□□ -0.38
CSGALNACT2-201ENST00000374466 SPDYE3A6NKU9 549 aa12.69□□□□□ -0.38
CSGALNACT2-201ENST00000374466 SNAI1O95863 264 aaPredicted RBP12.69□□□□□ -0.38
CSGALNACT2-201ENST00000374466 ALAS1P13196 640 aa12.69□□□□□ -0.38
CSGALNACT2-201ENST00000374466 NLRX1Q86UT6 975 aa12.69□□□□□ -0.38
CSGALNACT2-201ENST00000374466 ABHD16BQ9H3Z7 469 aa12.69□□□□□ -0.38
CSGALNACT2-201ENST00000374466 GNEQ9Y223 722 aaKnown RBP12.69□□□□□ -0.38
CSGALNACT2-201ENST00000374466 HPSEQ9Y251 543 aa12.69□□□□□ -0.38
CSGALNACT2-201ENST00000374466 CTDP1Q9Y5B0 961 aaPredicted RBP12.69□□□□□ -0.38
CSGALNACT2-201ENST00000374466 KIF22Q14807 665 aa12.69□□□□□ -0.38
CSGALNACT2-201ENST00000374466 STXBP2Q15833 593 aa12.69□□□□□ -0.38
CSGALNACT2-201ENST00000374466 TTC38Q5R3I4 469 aa12.69□□□□□ -0.38
CSGALNACT2-201ENST00000374466 ANO1Q5XXA6 986 aa12.69□□□□□ -0.38
CSGALNACT2-201ENST00000374466 SMAP1Q8IYB5 467 aaPredicted RBP12.69□□□□□ -0.38
CSGALNACT2-201ENST00000374466 TBCKQ8TEA7 893 aa12.69□□□□□ -0.38
CSGALNACT2-201ENST00000374466 TAAR1Q96RJ0 339 aa12.69□□□□□ -0.38
CSGALNACT2-201ENST00000374466 POLR3CQ9BUI4 534 aaPredicted RBP12.69□□□□□ -0.38
CSGALNACT2-201ENST00000374466 R3HDMLQ9H3Y0 253 aa12.69□□□□□ -0.38
CSGALNACT2-201ENST00000374466 FBXO2Q9UK22 296 aaPredicted RBP12.69□□□□□ -0.38
CSGALNACT2-201ENST00000374466 KCNJ14Q9UNX9 436 aa12.69□□□□□ -0.38
CSGALNACT2-201ENST00000374466 POTEB2H3BUK9 544 aa12.69□□□□□ -0.38
CSGALNACT2-201ENST00000374466 KPNA6O60684 536 aa12.69□□□□□ -0.38
CSGALNACT2-201ENST00000374466 NR3C2P08235 984 aa12.69□□□□□ -0.38
CSGALNACT2-201ENST00000374466 SCP2P22307 547 aa12.69□□□□□ -0.38
CSGALNACT2-201ENST00000374466 SESTD1Q86VW0 696 aa12.69□□□□□ -0.38
CSGALNACT2-201ENST00000374466 HAS1Q92839 578 aa12.69□□□□□ -0.38
CSGALNACT2-201ENST00000374466 H3BQV1 296 aa12.68□□□□□ -0.38
CSGALNACT2-201ENST00000374466 CUTAO60888 179 aa12.68□□□□□ -0.38
CSGALNACT2-201ENST00000374466 SFNP31947 248 aa12.68□□□□□ -0.38
CSGALNACT2-201ENST00000374466 IFFO2Q5TF58 517 aa12.68□□□□□ -0.38
CSGALNACT2-201ENST00000374466 DDX11Q96FC9 970 aa12.68□□□□□ -0.38
CSGALNACT2-201ENST00000374466 TINF2Q9BSI4 451 aa12.68□□□□□ -0.38
CSGALNACT2-201ENST00000374466 TCHHQ07283 1943 aa12.68□□□□□ -0.38
CSGALNACT2-201ENST00000374466 CCDC194A0A1B0GVG4 234 aa12.68□□□□□ -0.38
CSGALNACT2-201ENST00000374466 RAB11FIP4Q86YS3 637 aa12.68□□□□□ -0.38
CSGALNACT2-201ENST00000374466 NPLOC4Q8TAT6 608 aa12.68□□□□□ -0.38
CSGALNACT2-201ENST00000374466 WDR11Q9BZH6 1224 aa12.68□□□□□ -0.38
CSGALNACT2-201ENST00000374466 CTCFP49711 727 aaPredicted RBP12.67□□□□□ -0.38
CSGALNACT2-201ENST00000374466 AXDND1Q5T1B0 1012 aaPredicted RBP12.67□□□□□ -0.38
CSGALNACT2-201ENST00000374466 TSEN34Q9BSV6 310 aaKnown RBP12.67□□□□□ -0.38
CSGALNACT2-201ENST00000374466 CUEDC2Q9H467 287 aa12.67□□□□□ -0.38
CSGALNACT2-201ENST00000374466 EFCC1Q9HA90 598 aa12.67□□□□□ -0.38
CSGALNACT2-201ENST00000374466 MSCO60682 206 aa12.67□□□□□ -0.38
CSGALNACT2-201ENST00000374466 ITGB5P18084 799 aa12.67□□□□□ -0.38
CSGALNACT2-201ENST00000374466 MCCD1P59942 119 aaPredicted RBP12.67□□□□□ -0.38
CSGALNACT2-201ENST00000374466 IKQ13123 557 aaPredicted RBP12.67□□□□□ -0.38
CSGALNACT2-201ENST00000374466 HOMER1Q86YM7 354 aa12.67□□□□□ -0.38
CSGALNACT2-201ENST00000374466 TMEM174Q8WUU8 243 aa12.67□□□□□ -0.38
CSGALNACT2-201ENST00000374466 TIGD1Q96MW7 591 aa12.67□□□□□ -0.38
CSGALNACT2-201ENST00000374466 RMDN3Q96TC7 470 aa12.67□□□□□ -0.38
CSGALNACT2-201ENST00000374466 CPA4Q9UI42 421 aa12.67□□□□□ -0.38
CSGALNACT2-201ENST00000374466 PTPN22Q9Y2R2 807 aa12.67□□□□□ -0.38
CSGALNACT2-201ENST00000374466 IGSF9BQ9UPX0 1349 aa12.67□□□□□ -0.38
CSGALNACT2-201ENST00000374466 SCN10AQ9Y5Y9 1956 aa12.67□□□□□ -0.38
CSGALNACT2-201ENST00000374466 COL1A2P08123 1366 aa12.67□□□□□ -0.38
CSGALNACT2-201ENST00000374466 NR5A1Q13285 461 aa12.67□□□□□ -0.38
CSGALNACT2-201ENST00000374466 ZNF710Q8N1W2 664 aa12.67□□□□□ -0.38
CSGALNACT2-201ENST00000374466 TUFT1Q9NNX1 390 aa12.67□□□□□ -0.38
CSGALNACT2-201ENST00000374466 FAM86B1E9PN63 330 aa12.66□□□□□ -0.38
CSGALNACT2-201ENST00000374466 FAM86B2P0C5J1 330 aa12.66□□□□□ -0.38
CSGALNACT2-201ENST00000374466 SLC26A2P50443 739 aa12.66□□□□□ -0.38
CSGALNACT2-201ENST00000374466 ECM1Q16610 540 aa12.66□□□□□ -0.38
CSGALNACT2-201ENST00000374466 GNPTABQ3T906 1256 aa12.66□□□□□ -0.38
CSGALNACT2-201ENST00000374466 C1orf53Q5VUE5 145 aa12.66□□□□□ -0.38
CSGALNACT2-201ENST00000374466 TBC1D5Q92609 795 aa12.66□□□□□ -0.38
CSGALNACT2-201ENST00000374466 CRISPLD2Q9H0B8 497 aa12.66□□□□□ -0.38
CSGALNACT2-201ENST00000374466 VAT1LQ9HCJ6 419 aa12.66□□□□□ -0.38
CSGALNACT2-201ENST00000374466 DDX41Q9UJV9 622 aaKnown RBP12.66□□□□□ -0.38
CSGALNACT2-201ENST00000374466 CAP1Q01518 475 aa12.66□□□□□ -0.38
CSGALNACT2-201ENST00000374466 PTPN11Q06124 597 aaPredicted RBP12.66□□□□□ -0.38
CSGALNACT2-201ENST00000374466 TMEM119Q4V9L6 283 aa12.66□□□□□ -0.38
CSGALNACT2-201ENST00000374466 ADALQ6DHV7 355 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms