RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 IGSF3O75054 1194 aa10.7□□□□□ -0.7
COL4A6-202ENST00000372216 TRMT2AQ8IZ69 625 aaKnown RBP10.7□□□□□ -0.7
COL4A6-202ENST00000372216 RAB20Q9NX57 234 aa10.7□□□□□ -0.7
COL4A6-202ENST00000372216 RNF181Q9P0P0 153 aa10.7□□□□□ -0.7
COL4A6-202ENST00000372216 SASH1O94885 1247 aa10.7□□□□□ -0.7
COL4A6-202ENST00000372216 CYP19A1P11511 503 aaPredicted RBP10.7□□□□□ -0.7
COL4A6-202ENST00000372216 NDUFA8P51970 172 aa10.7□□□□□ -0.7
COL4A6-202ENST00000372216 ADKP55263 362 aaKnown RBP10.7□□□□□ -0.7
COL4A6-202ENST00000372216 MYL7Q01449 175 aa10.7□□□□□ -0.7
COL4A6-202ENST00000372216 FAM26FQ5R3K3 315 aa10.7□□□□□ -0.7
COL4A6-202ENST00000372216 CCDC105Q8IYK2 499 aa10.7□□□□□ -0.7
COL4A6-202ENST00000372216 ANKRD42Q8N9B4 389 aa10.7□□□□□ -0.7
COL4A6-202ENST00000372216 KMT5AQ9NQR1 393 aa10.7□□□□□ -0.7
COL4A6-202ENST00000372216 FAM114A2Q9NRY5 505 aa10.7□□□□□ -0.7
COL4A6-202ENST00000372216 CROCC2H7BZ55 1655 aa10.7□□□□□ -0.7
COL4A6-202ENST00000372216 RBBP5Q15291 538 aaKnown RBP10.7□□□□□ -0.7
COL4A6-202ENST00000372216 ANKRD36BP1Q96IX9 119 aa10.7□□□□□ -0.7
COL4A6-202ENST00000372216 NUF2Q9BZD4 464 aa10.7□□□□□ -0.7
COL4A6-202ENST00000372216 CALCOCO1Q9P1Z2 691 aa10.7□□□□□ -0.7
COL4A6-202ENST00000372216 HESX1Q9UBX0 185 aa10.7□□□□□ -0.7
COL4A6-202ENST00000372216 PNMA3Q9UL41 463 aa10.7□□□□□ -0.7
COL4A6-202ENST00000372216 CPSF1Q10570 1443 aaKnown RBP10.7□□□□□ -0.7
COL4A6-202ENST00000372216 HNRNPDLO14979 420 aaKnown RBP10.7□□□□□ -0.7
COL4A6-202ENST00000372216 ADRA2BP18089 450 aa10.7□□□□□ -0.7
COL4A6-202ENST00000372216 MCAMP43121 646 aa10.7□□□□□ -0.7
COL4A6-202ENST00000372216 HS1BP3Q53T59 392 aa10.7□□□□□ -0.7
COL4A6-202ENST00000372216 FOXP4Q8IVH2 680 aaPredicted RBP10.7□□□□□ -0.7
COL4A6-202ENST00000372216 SLC17A8Q8NDX2 589 aa10.7□□□□□ -0.7
COL4A6-202ENST00000372216 SLC7A3Q8WY07 619 aa10.7□□□□□ -0.7
COL4A6-202ENST00000372216 TSR3Q9UJK0 312 aaKnown RBP10.7□□□□□ -0.7
COL4A6-202ENST00000372216 MINPP1Q9UNW1 487 aa10.7□□□□□ -0.7
COL4A6-202ENST00000372216 KCNQ2O43526 872 aa10.7□□□□□ -0.7
COL4A6-202ENST00000372216 TTBK2Q6IQ55 1244 aa10.7□□□□□ -0.7
COL4A6-202ENST00000372216 HDXQ7Z353 690 aa10.7□□□□□ -0.7
COL4A6-202ENST00000372216 PPM1KQ8N3J5 372 aa10.7□□□□□ -0.7
COL4A6-202ENST00000372216 PI4K2BQ8TCG2 481 aa10.7□□□□□ -0.7
COL4A6-202ENST00000372216 GJA10Q969M2 543 aa10.7□□□□□ -0.7
COL4A6-202ENST00000372216 HINFPQ9BQA5 517 aa10.7□□□□□ -0.7
COL4A6-202ENST00000372216 JPH2Q9BR39 696 aaPredicted RBP10.7□□□□□ -0.7
COL4A6-202ENST00000372216 ZNF215Q9UL58 517 aaPredicted RBP10.7□□□□□ -0.7
COL4A6-202ENST00000372216 TRPM1Q7Z4N2 1603 aa10.7□□□□□ -0.7
COL4A6-202ENST00000372216 MYO3BQ8WXR4 1341 aa10.7□□□□□ -0.7
COL4A6-202ENST00000372216 MEIS1O00470 390 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 ZSCAN20P17040 1043 aaPredicted RBP10.69□□□□□ -0.7
COL4A6-202ENST00000372216 CAPN2P17655 700 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 POLR2FP61218 127 aaKnown RBP10.69□□□□□ -0.7
COL4A6-202ENST00000372216 NEDD9Q14511 834 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 LONRF2Q1L5Z9 754 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 SRGAP1Q7Z6B7 1085 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 IFT20Q8IY31 132 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 INO80B-WBP1J3KQ70 363 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 GPSM2P81274 684 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 LACTBP83111 547 aaPredicted RBP10.69□□□□□ -0.7
COL4A6-202ENST00000372216 CACNB1Q02641 598 aaPredicted RBP10.69□□□□□ -0.7
COL4A6-202ENST00000372216 TUBB2AQ13885 445 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 ANO4Q32M45 955 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 ACBD5Q5T8D3 534 aaPredicted RBP10.69□□□□□ -0.7
COL4A6-202ENST00000372216 HHATQ5VTY9 493 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 RASEFQ8IZ41 740 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 LARP4BQ92615 738 aaKnown RBP10.69□□□□□ -0.7
COL4A6-202ENST00000372216 CEP170P1Q96L14 293 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 TUBB2BQ9BVA1 445 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 WDR11Q9BZH6 1224 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 INO80BQ9C086 356 aaPredicted RBP10.69□□□□□ -0.7
COL4A6-202ENST00000372216 XPO4Q9C0E2 1151 aaKnown RBP10.69□□□□□ -0.7
COL4A6-202ENST00000372216 AMFRQ9UKV5 643 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 INPP5FQ9Y2H2 1132 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 JCADQ9P266 1359 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 ZBBXA8MT70 800 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 HOXA13P31271 388 aaPredicted RBP10.69□□□□□ -0.7
COL4A6-202ENST00000372216 GDAP1Q8TB36 358 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 MAIP1Q8WWC4 291 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 TSKSQ9UJT2 592 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 TXNRD1Q16881 649 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 HDAC11Q96DB2 347 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 NUB1Q9Y5A7 615 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 CAMSAP1Q5T5Y3 1602 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 GH2P01242 217 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 IFNB1P01574 187 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 PSAPP07602 524 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 KRT15P19012 456 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 CDR2Q01850 454 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 ERCC6LQ2NKX8 1250 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 CDHR1Q96JP9 859 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 MAGEF1Q9HAY2 307 aa10.69□□□□□ -0.7
COL4A6-202ENST00000372216 XPOTO43592 962 aaKnown RBP10.68□□□□□ -0.7
COL4A6-202ENST00000372216 IVLP07476 585 aa10.68□□□□□ -0.7
COL4A6-202ENST00000372216 HADHQ16836 314 aaKnown RBP10.68□□□□□ -0.7
COL4A6-202ENST00000372216 MTERF2Q49AM1 385 aa10.68□□□□□ -0.7
COL4A6-202ENST00000372216 ACCSQ96QU6 501 aa10.68□□□□□ -0.7
COL4A6-202ENST00000372216 ZSWIM5Q9P217 1185 aa10.68□□□□□ -0.7
COL4A6-202ENST00000372216 UNC13BO14795 1591 aa10.68□□□□□ -0.7
COL4A6-202ENST00000372216 PNMA6FA0A0J9YX94 578 aa10.68□□□□□ -0.7
COL4A6-202ENST00000372216 GAP43P17677 238 aa10.68□□□□□ -0.7
COL4A6-202ENST00000372216 TRAPPC10P48553 1259 aa10.68□□□□□ -0.7
COL4A6-202ENST00000372216 TMEM179Q6ZVK1 233 aa10.68□□□□□ -0.7
COL4A6-202ENST00000372216 EXOC8Q8IYI6 725 aa10.68□□□□□ -0.7
COL4A6-202ENST00000372216 OSBPL3Q9H4L5 887 aa10.68□□□□□ -0.7
COL4A6-202ENST00000372216 TDRD3Q9H7E2 651 aaKnown RBP10.68□□□□□ -0.7
COL4A6-202ENST00000372216 RIPOR2Q9Y4F9 1068 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms