RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 RPS6P62753 249 aaKnown RBP11.88□□□□□ -0.51
COL5A1-202ENST00000371820 FAAP100Q0VG06 881 aa11.88□□□□□ -0.51
COL5A1-202ENST00000371820 TMEM67Q5HYA8 995 aa11.88□□□□□ -0.51
COL5A1-202ENST00000371820 LARP1BQ659C4 914 aaKnown RBP11.88□□□□□ -0.51
COL5A1-202ENST00000371820 CREB3L3Q68CJ9 461 aa11.88□□□□□ -0.51
COL5A1-202ENST00000371820 CATIPQ7Z7H3 387 aa11.88□□□□□ -0.51
COL5A1-202ENST00000371820 FBXO11Q86XK2 927 aa11.88□□□□□ -0.51
COL5A1-202ENST00000371820 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.88□□□□□ -0.51
COL5A1-202ENST00000371820 TMTC2Q8N394 836 aa11.88□□□□□ -0.51
COL5A1-202ENST00000371820 MORC4Q8TE76 937 aa11.88□□□□□ -0.51
COL5A1-202ENST00000371820 CLEC4DQ8WXI8 215 aa11.88□□□□□ -0.51
COL5A1-202ENST00000371820 TMEM87BQ96K49 555 aa11.88□□□□□ -0.51
COL5A1-202ENST00000371820 LLPHQ9BRT6 129 aaKnown RBP11.88□□□□□ -0.51
COL5A1-202ENST00000371820 AMNQ9BXJ7 453 aa11.88□□□□□ -0.51
COL5A1-202ENST00000371820 KATNBL1Q9H079 304 aa11.88□□□□□ -0.51
COL5A1-202ENST00000371820 AP5M1Q9H0R1 490 aa11.88□□□□□ -0.51
COL5A1-202ENST00000371820 UPF3AQ9H1J1 476 aaKnown RBP11.88□□□□□ -0.51
COL5A1-202ENST00000371820 CFAP45Q9UL16 551 aa11.88□□□□□ -0.51
COL5A1-202ENST00000371820 Q9Y3F1 56 aa11.88□□□□□ -0.51
COL5A1-202ENST00000371820 NKX3-2P78367 333 aa11.87□□□□□ -0.51
COL5A1-202ENST00000371820 FPGSQ05932 587 aa11.87□□□□□ -0.51
COL5A1-202ENST00000371820 PDE4DQ08499 809 aa11.87□□□□□ -0.51
COL5A1-202ENST00000371820 GRM4Q14833 912 aa11.87□□□□□ -0.51
COL5A1-202ENST00000371820 KCNA10Q16322 511 aa11.87□□□□□ -0.51
COL5A1-202ENST00000371820 QRICH1Q2TAL8 776 aa11.87□□□□□ -0.51
COL5A1-202ENST00000371820 GNASQ5JWF2 1037 aa11.87□□□□□ -0.51
COL5A1-202ENST00000371820 SLC30A10Q6XR72 485 aa11.87□□□□□ -0.51
COL5A1-202ENST00000371820 TLK2Q86UE8 772 aa11.87□□□□□ -0.51
COL5A1-202ENST00000371820 SAMD3Q8N6K7 520 aa11.87□□□□□ -0.51
COL5A1-202ENST00000371820 RNPC3Q96LT9 517 aaKnown RBP11.87□□□□□ -0.51
COL5A1-202ENST00000371820 CDX2Q99626 313 aaPredicted RBP11.87□□□□□ -0.51
COL5A1-202ENST00000371820 TTYH1Q9H313 450 aaPredicted RBP11.87□□□□□ -0.51
COL5A1-202ENST00000371820 SEMA6BQ9H3T3 888 aa11.87□□□□□ -0.51
COL5A1-202ENST00000371820 JMJD4Q9H9V9 463 aa11.87□□□□□ -0.51
COL5A1-202ENST00000371820 VAT1LQ9HCJ6 419 aa11.87□□□□□ -0.51
COL5A1-202ENST00000371820 TMEM39AQ9NV64 488 aa11.87□□□□□ -0.51
COL5A1-202ENST00000371820 MAP3K20Q9NYL2 800 aaKnown RBP11.87□□□□□ -0.51
COL5A1-202ENST00000371820 TBX21Q9UL17 535 aa11.87□□□□□ -0.51
COL5A1-202ENST00000371820 TMEM265A0A087WTH1 108 aa11.86□□□□□ -0.51
COL5A1-202ENST00000371820 PALM3A6NDB9 673 aaPredicted RBP11.86□□□□□ -0.51
COL5A1-202ENST00000371820 DCDC2CA8MYV0 355 aa11.86□□□□□ -0.51
COL5A1-202ENST00000371820 DYNC1I1O14576 645 aa11.86□□□□□ -0.51
COL5A1-202ENST00000371820 ZBTB5O15062 677 aa11.86□□□□□ -0.51
COL5A1-202ENST00000371820 NKRFO15226 690 aaKnown RBP eCLIP11.86□□□□□ -0.51
COL5A1-202ENST00000371820 CABYRO75952 493 aa11.86□□□□□ -0.51
COL5A1-202ENST00000371820 DDAH1O94760 285 aa11.86□□□□□ -0.51
COL5A1-202ENST00000371820 KIF5BP33176 963 aa11.86□□□□□ -0.51
COL5A1-202ENST00000371820 IRX5P78411 483 aaPredicted RBP11.86□□□□□ -0.51
COL5A1-202ENST00000371820 DHX8Q14562 1220 aaKnown RBP11.86□□□□□ -0.51
COL5A1-202ENST00000371820 STOX1Q6ZVD7 989 aa11.86□□□□□ -0.51
COL5A1-202ENST00000371820 FBXO16Q8IX29 292 aaPredicted RBP11.86□□□□□ -0.51
COL5A1-202ENST00000371820 MB21D2Q8IYB1 491 aaPredicted RBP11.86□□□□□ -0.51
COL5A1-202ENST00000371820 RASEFQ8IZ41 740 aa11.86□□□□□ -0.51
COL5A1-202ENST00000371820 CTCFLQ8NI51 663 aaPredicted RBP11.86□□□□□ -0.51
COL5A1-202ENST00000371820 VTI1AQ96AJ9 217 aa11.86□□□□□ -0.51
COL5A1-202ENST00000371820 PRIMPOLQ96LW4 560 aa11.86□□□□□ -0.51
COL5A1-202ENST00000371820 MAP3K14Q99558 947 aa11.86□□□□□ -0.51
COL5A1-202ENST00000371820 SEZ6LQ9BYH1 1024 aa11.86□□□□□ -0.51
COL5A1-202ENST00000371820 CPVLQ9H3G5 476 aa11.86□□□□□ -0.51
COL5A1-202ENST00000371820 DDX19AQ9NUU7 478 aaKnown RBP11.86□□□□□ -0.51
COL5A1-202ENST00000371820 MAD2L2Q9UI95 211 aa11.86□□□□□ -0.51
COL5A1-202ENST00000371820 CDH23Q9H251 3354 aa11.86□□□□□ -0.51
COL5A1-202ENST00000371820 LCTP09848 1927 aa11.86□□□□□ -0.51
COL5A1-202ENST00000371820 ASTN1O14525 1302 aa11.86□□□□□ -0.51
COL5A1-202ENST00000371820 A0A0U1RQG5 324 aaPredicted RBP11.85□□□□□ -0.51
COL5A1-202ENST00000371820 CCDC69A6NI79 296 aa11.85□□□□□ -0.51
COL5A1-202ENST00000371820 SLC27A2O14975 620 aa11.85□□□□□ -0.51
COL5A1-202ENST00000371820 CTAGE5O15320 804 aa11.85□□□□□ -0.51
COL5A1-202ENST00000371820 TLR3O15455 904 aaKnown RBP11.85□□□□□ -0.51
COL5A1-202ENST00000371820 TIMP1P01033 207 aa11.85□□□□□ -0.51
COL5A1-202ENST00000371820 ASGR1P07306 291 aa11.85□□□□□ -0.51
COL5A1-202ENST00000371820 RPS6KB1P23443 525 aa11.85□□□□□ -0.51
COL5A1-202ENST00000371820 GNAQP50148 359 aa11.85□□□□□ -0.51
COL5A1-202ENST00000371820 CDK7P50613 346 aa11.85□□□□□ -0.51
COL5A1-202ENST00000371820 FSCN1Q16658 493 aaKnown RBP11.85□□□□□ -0.51
COL5A1-202ENST00000371820 BRDTQ58F21 947 aaPredicted RBP11.85□□□□□ -0.51
COL5A1-202ENST00000371820 TAPT1Q6NXT6 567 aa11.85□□□□□ -0.51
COL5A1-202ENST00000371820 NFXL1Q6ZNB6 911 aa11.85□□□□□ -0.51
COL5A1-202ENST00000371820 EEPD1Q7L9B9 569 aa11.85□□□□□ -0.51
COL5A1-202ENST00000371820 STAG2Q8N3U4 1231 aa11.85□□□□□ -0.51
COL5A1-202ENST00000371820 NSUN6Q8TEA1 469 aaKnown RBP11.85□□□□□ -0.51
COL5A1-202ENST00000371820 SCFD2Q8WU76 684 aa11.85□□□□□ -0.51
COL5A1-202ENST00000371820 MTMR8Q96EF0 704 aa11.85□□□□□ -0.51
COL5A1-202ENST00000371820 LZTS2Q9BRK4 669 aa11.85□□□□□ -0.51
COL5A1-202ENST00000371820 RIOX1Q9H6W3 641 aa11.85□□□□□ -0.51
COL5A1-202ENST00000371820 MTMR6Q9Y217 621 aa11.85□□□□□ -0.51
COL5A1-202ENST00000371820 GNEQ9Y223 722 aaKnown RBP11.85□□□□□ -0.51
COL5A1-202ENST00000371820 MYH6P13533 1939 aa11.85□□□□□ -0.51
COL5A1-202ENST00000371820 EYSQ5T1H1 3165 aa11.84□□□□□ -0.51
COL5A1-202ENST00000371820 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.84□□□□□ -0.51
COL5A1-202ENST00000371820 PRC1O43663 620 aa11.84□□□□□ -0.51
COL5A1-202ENST00000371820 CALM1P0DP23 149 aa11.84□□□□□ -0.51
COL5A1-202ENST00000371820 CALM2P0DP24 149 aa11.84□□□□□ -0.51
COL5A1-202ENST00000371820 CALM3P0DP25 149 aa11.84□□□□□ -0.51
COL5A1-202ENST00000371820 EDNRBP24530 442 aa11.84□□□□□ -0.51
COL5A1-202ENST00000371820 CPT1AP50416 773 aa11.84□□□□□ -0.51
COL5A1-202ENST00000371820 TROAPQ12815 778 aa11.84□□□□□ -0.51
COL5A1-202ENST00000371820 PPP2R5BQ15173 497 aa11.84□□□□□ -0.51
COL5A1-202ENST00000371820 DUSP28Q4G0W2 176 aa11.84□□□□□ -0.51
COL5A1-202ENST00000371820 FOXD4L5Q5VV16 416 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms