RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 CATSPER3Q86XQ3 398 aa16.48■□□□□ 0.23
COL5A1-201ENST00000371817 C1orf112Q9NSG2 853 aa16.48■□□□□ 0.23
COL5A1-201ENST00000371817 IQCA1LA6NCM1 817 aa16.48■□□□□ 0.23
COL5A1-201ENST00000371817 TMEM191CA6NGB0 347 aa16.48■□□□□ 0.23
COL5A1-201ENST00000371817 RHOBTB1O94844 696 aa16.48■□□□□ 0.23
COL5A1-201ENST00000371817 ACSL3O95573 720 aa16.48■□□□□ 0.23
COL5A1-201ENST00000371817 TMEM191BP0C7N4 346 aa16.48■□□□□ 0.23
COL5A1-201ENST00000371817 DR1Q01658 176 aa16.48■□□□□ 0.23
COL5A1-201ENST00000371817 CRYMQ14894 314 aa16.48■□□□□ 0.23
COL5A1-201ENST00000371817 PGBD1Q96JS3 809 aa16.48■□□□□ 0.23
COL5A1-201ENST00000371817 NR1H3Q13133 447 aa16.48■□□□□ 0.23
COL5A1-201ENST00000371817 MYSM1Q5VVJ2 828 aa16.48■□□□□ 0.23
COL5A1-201ENST00000371817 NEUROG2Q9H2A3 272 aa16.48■□□□□ 0.23
COL5A1-201ENST00000371817 MAEAQ7L5Y9 396 aa16.48■□□□□ 0.23
COL5A1-201ENST00000371817 FAM96AQ9H5X1 160 aa16.48■□□□□ 0.23
COL5A1-201ENST00000371817 VCAM1P19320 739 aa16.48■□□□□ 0.23
COL5A1-201ENST00000371817 POLR2BP30876 1174 aaKnown RBP16.48■□□□□ 0.23
COL5A1-201ENST00000371817 ST13P50502 369 aaKnown RBP16.48■□□□□ 0.23
COL5A1-201ENST00000371817 PLD3Q8IV08 490 aa16.48■□□□□ 0.23
COL5A1-201ENST00000371817 DEPDC1BQ8WUY9 529 aa16.48■□□□□ 0.23
COL5A1-201ENST00000371817 VTI1AQ96AJ9 217 aa16.48■□□□□ 0.23
COL5A1-201ENST00000371817 MYO1FO00160 1098 aa16.47■□□□□ 0.23
COL5A1-201ENST00000371817 GRIN1Q05586 938 aa16.47■□□□□ 0.23
COL5A1-201ENST00000371817 DEPDC1Q5TB30 811 aa16.47■□□□□ 0.23
COL5A1-201ENST00000371817 MIGA1Q8NAN2 632 aa16.47■□□□□ 0.23
COL5A1-201ENST00000371817 SERTAD1Q9UHV2 236 aa16.47■□□□□ 0.23
COL5A1-201ENST00000371817 ANKRD12Q6UB98 2062 aa16.47■□□□□ 0.23
COL5A1-201ENST00000371817 COPB1P53618 953 aaKnown RBP16.47■□□□□ 0.23
COL5A1-201ENST00000371817 TJAP1Q5JTD0 557 aa16.47■□□□□ 0.23
COL5A1-201ENST00000371817 KRT25Q7Z3Z0 450 aa16.47■□□□□ 0.23
COL5A1-201ENST00000371817 STAMQ92783 540 aa16.47■□□□□ 0.23
COL5A1-201ENST00000371817 TMEM154Q6P9G4 183 aa16.47■□□□□ 0.23
COL5A1-201ENST00000371817 LZTS2Q9BRK4 669 aa16.47■□□□□ 0.23
COL5A1-201ENST00000371817 V9GY48 417 aaPredicted RBP16.47■□□□□ 0.23
COL5A1-201ENST00000371817 ZMYM4Q5VZL5 1548 aa16.47■□□□□ 0.23
COL5A1-201ENST00000371817 NDUFA8P51970 172 aa16.47■□□□□ 0.23
COL5A1-201ENST00000371817 MRPS35P82673 323 aaKnown RBP16.47■□□□□ 0.23
COL5A1-201ENST00000371817 MESDQ14696 234 aa16.47■□□□□ 0.23
COL5A1-201ENST00000371817 NCLNQ969V3 563 aa16.47■□□□□ 0.23
COL5A1-201ENST00000371817 KCNG1Q9UIX4 513 aa16.47■□□□□ 0.23
COL5A1-201ENST00000371817 CHEK2O96017 543 aa16.47■□□□□ 0.23
COL5A1-201ENST00000371817 ITKQ08881 620 aa16.47■□□□□ 0.23
COL5A1-201ENST00000371817 FAM161BQ96MY7 647 aa16.47■□□□□ 0.23
COL5A1-201ENST00000371817 RPN1P04843 607 aaKnown RBP16.47■□□□□ 0.23
COL5A1-201ENST00000371817 CAPN1P07384 714 aa16.47■□□□□ 0.23
COL5A1-201ENST00000371817 A6NJR5 290 aa16.46■□□□□ 0.23
COL5A1-201ENST00000371817 ZNF804AQ7Z570 1209 aa16.46■□□□□ 0.23
COL5A1-201ENST00000371817 GAS2L3Q86XJ1 694 aa16.46■□□□□ 0.23
COL5A1-201ENST00000371817 TESK2Q96S53 571 aa16.46■□□□□ 0.23
COL5A1-201ENST00000371817 OLA1Q9NTK5 396 aaKnown RBP16.46■□□□□ 0.23
COL5A1-201ENST00000371817 PKD2L2Q9NZM6 624 aa16.46■□□□□ 0.23
COL5A1-201ENST00000371817 NOP56O00567 594 aaKnown RBP16.46■□□□□ 0.23
COL5A1-201ENST00000371817 TMPRSS15P98073 1019 aa16.46■□□□□ 0.23
COL5A1-201ENST00000371817 EP400NLQ6ZTU2 488 aa16.46■□□□□ 0.23
COL5A1-201ENST00000371817 JARID2Q92833 1246 aaPredicted RBP16.46■□□□□ 0.23
COL5A1-201ENST00000371817 LRRIQ3A6PVS8 624 aaPredicted RBP16.46■□□□□ 0.23
COL5A1-201ENST00000371817 PPP2R2AP63151 447 aa16.46■□□□□ 0.23
COL5A1-201ENST00000371817 FBXW10Q5XX13 1052 aa16.46■□□□□ 0.23
COL5A1-201ENST00000371817 ACAD11Q709F0 780 aa16.46■□□□□ 0.23
COL5A1-201ENST00000371817 MTBPQ96DY7 904 aa16.46■□□□□ 0.23
COL5A1-201ENST00000371817 PA2G4Q9UQ80 394 aaKnown RBP16.46■□□□□ 0.23
COL5A1-201ENST00000371817 CAPN9O14815 690 aa16.46■□□□□ 0.23
COL5A1-201ENST00000371817 CYP2J2P51589 502 aa16.46■□□□□ 0.23
COL5A1-201ENST00000371817 RBL2Q08999 1139 aa16.46■□□□□ 0.23
COL5A1-201ENST00000371817 NLRP14Q86W24 1093 aa16.46■□□□□ 0.23
COL5A1-201ENST00000371817 IL17RAQ96F46 866 aa16.46■□□□□ 0.23
COL5A1-201ENST00000371817 BRD8Q9H0E9 1235 aa16.46■□□□□ 0.23
COL5A1-201ENST00000371817 SUN2Q9UH99 717 aa16.46■□□□□ 0.23
COL5A1-201ENST00000371817 FAM170AA1A519 330 aa16.46■□□□□ 0.22
COL5A1-201ENST00000371817 JAK2O60674 1132 aa16.46■□□□□ 0.22
COL5A1-201ENST00000371817 CMA1P23946 247 aa16.46■□□□□ 0.22
COL5A1-201ENST00000371817 TRIM11Q96F44 468 aa16.46■□□□□ 0.22
COL5A1-201ENST00000371817 EPRSP07814 1512 aaKnown RBP16.45■□□□□ 0.22
COL5A1-201ENST00000371817 RASA4BC9J798 803 aa16.45■□□□□ 0.22
COL5A1-201ENST00000371817 RASA4O43374 803 aa16.45■□□□□ 0.22
COL5A1-201ENST00000371817 NEK8Q86SG6 692 aa16.45■□□□□ 0.22
COL5A1-201ENST00000371817 HIC2Q96JB3 615 aa16.45■□□□□ 0.22
COL5A1-201ENST00000371817 PKD2L1Q9P0L9 805 aa16.45■□□□□ 0.22
COL5A1-201ENST00000371817 PODXLO00592 558 aa16.45■□□□□ 0.22
COL5A1-201ENST00000371817 EXOC3L4Q17RC7 722 aa16.45■□□□□ 0.22
COL5A1-201ENST00000371817 PLEKHM3Q6ZWE6 761 aa16.45■□□□□ 0.22
COL5A1-201ENST00000371817 CCDC103Q8IW40 242 aa16.45■□□□□ 0.22
COL5A1-201ENST00000371817 METTL14Q9HCE5 456 aaKnown RBP16.45■□□□□ 0.22
COL5A1-201ENST00000371817 TMCC1O94876 653 aa16.45■□□□□ 0.22
COL5A1-201ENST00000371817 TSPY1Q01534 308 aa16.45■□□□□ 0.22
COL5A1-201ENST00000371817 MED21Q13503 144 aa16.45■□□□□ 0.22
COL5A1-201ENST00000371817 SPOPLQ6IQ16 392 aa16.45■□□□□ 0.22
COL5A1-201ENST00000371817 BTNL9Q6UXG8 535 aa16.45■□□□□ 0.22
COL5A1-201ENST00000371817 PROSER2Q86WR7 435 aaPredicted RBP16.45■□□□□ 0.22
COL5A1-201ENST00000371817 TUBGCP2Q9BSJ2 902 aa16.45■□□□□ 0.22
COL5A1-201ENST00000371817 IQSEC3Q9UPP2 1182 aaPredicted RBP16.45■□□□□ 0.22
COL5A1-201ENST00000371817 MAGOHP61326 146 aaKnown RBP16.45■□□□□ 0.22
COL5A1-201ENST00000371817 CENPUQ71F23 418 aa16.45■□□□□ 0.22
COL5A1-201ENST00000371817 DZIP3Q86Y13 1208 aaKnown RBP16.45■□□□□ 0.22
COL5A1-201ENST00000371817 SYBUQ9NX95 663 aa16.45■□□□□ 0.22
COL5A1-201ENST00000371817 ZBTB22O15209 634 aa16.45■□□□□ 0.22
COL5A1-201ENST00000371817 SLC26A7Q8TE54 656 aa16.45■□□□□ 0.22
COL5A1-201ENST00000371817 SGSM2O43147 1006 aa16.45■□□□□ 0.22
COL5A1-201ENST00000371817 KSR2Q6VAB6 950 aa16.45■□□□□ 0.22
COL5A1-201ENST00000371817 ARAP1Q96P48 1450 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms