RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 FMR1Q06787 632 aaKnown RBP eCLIP10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 CCDC6Q16204 474 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 ARMCX5Q6P1M9 558 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 USP37Q86T82 979 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 ANKFY1Q9P2R3 1169 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 PACSIN2Q9UNF0 486 aaPredicted RBP10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 AGTPBP1Q9UPW5 1226 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 COMMD10Q9Y6G5 202 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 ESYT3A0FGR9 886 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 USP17L10C9JJH3 530 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 E7EVH7 732 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 PPEF1O14829 653 aaPredicted RBP10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 TDP2O95551 362 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 EIF2AK2P19525 551 aaKnown RBP10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 LONP1P36776 959 aaKnown RBP10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 EXOSC10Q01780 885 aaKnown RBP10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 RASA3Q14644 834 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 TMTC3Q6ZXV5 915 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 METTL16Q86W50 562 aaKnown RBP10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 SRBD1Q8N5C6 995 aaKnown RBP10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 TMEM87AQ8NBN3 555 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 ENOX1Q8TC92 643 aaKnown RBP10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 WDR24Q96S15 920 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 CCPG1Q9ULG6 757 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 PRPF3O43395 683 aaKnown RBP10□□□□□ -0.81
SMARCA1-202ENST00000371122 SEPT2Q15019 361 aa10□□□□□ -0.81
SMARCA1-202ENST00000371122 LRCH2Q5VUJ6 765 aa10□□□□□ -0.81
SMARCA1-202ENST00000371122 ZNF365Q70YC5 407 aa10□□□□□ -0.81
SMARCA1-202ENST00000371122 DHX40Q8IX18 779 aaKnown RBP10□□□□□ -0.81
SMARCA1-202ENST00000371122 NIM1KQ8IY84 436 aa10□□□□□ -0.81
SMARCA1-202ENST00000371122 AP1M1Q9BXS5 423 aa10□□□□□ -0.81
SMARCA1-202ENST00000371122 BSDC1Q9NW68 430 aaPredicted RBP10□□□□□ -0.81
SMARCA1-202ENST00000371122 PSDA5PKW4 1024 aaPredicted RBP10□□□□□ -0.81
SMARCA1-202ENST00000371122 LRRIQ4A6NIV6 560 aa10□□□□□ -0.81
SMARCA1-202ENST00000371122 EFCAB8A8MWE9 144 aa10□□□□□ -0.81
SMARCA1-202ENST00000371122 ERVV-1B6SEH8 477 aa10□□□□□ -0.81
SMARCA1-202ENST00000371122 IKBKBO14920 756 aa10□□□□□ -0.81
SMARCA1-202ENST00000371122 AP5Z1O43299 807 aa10□□□□□ -0.81
SMARCA1-202ENST00000371122 SLCO1A2P46721 670 aa10□□□□□ -0.81
SMARCA1-202ENST00000371122 RFX5P48382 616 aaPredicted RBP10□□□□□ -0.81
SMARCA1-202ENST00000371122 LIG3P49916 1009 aa10□□□□□ -0.81
SMARCA1-202ENST00000371122 GNGT1P63211 74 aa10□□□□□ -0.81
SMARCA1-202ENST00000371122 SNX1Q13596 522 aa10□□□□□ -0.81
SMARCA1-202ENST00000371122 EXOC3L4Q17RC7 722 aa10□□□□□ -0.81
SMARCA1-202ENST00000371122 EAPPQ56P03 285 aaPredicted RBP10□□□□□ -0.81
SMARCA1-202ENST00000371122 CCDC91Q7Z6B0 441 aa10□□□□□ -0.81
SMARCA1-202ENST00000371122 NLRX1Q86UT6 975 aa10□□□□□ -0.81
SMARCA1-202ENST00000371122 CCDC26Q8TAB7 109 aa10□□□□□ -0.81
SMARCA1-202ENST00000371122 HAUS4Q9H6D7 363 aa10□□□□□ -0.81
SMARCA1-202ENST00000371122 MTRF1LQ9UGC7 380 aaKnown RBP10□□□□□ -0.81
SMARCA1-202ENST00000371122 MTUS1Q9ULD2 1270 aa10□□□□□ -0.81
SMARCA1-202ENST00000371122 IVLP07476 585 aa10□□□□□ -0.81
SMARCA1-202ENST00000371122 ALDH1B1P30837 517 aa10□□□□□ -0.81
SMARCA1-202ENST00000371122 TRPC3Q13507 836 aa10□□□□□ -0.81
SMARCA1-202ENST00000371122 ZRSR2Q15696 482 aaKnown RBP10□□□□□ -0.81
SMARCA1-202ENST00000371122 IFT20Q8IY31 132 aa10□□□□□ -0.81
SMARCA1-202ENST00000371122 TRIML1Q8N9V2 468 aa10□□□□□ -0.81
SMARCA1-202ENST00000371122 BCAS4Q8TDM0 211 aa10□□□□□ -0.81
SMARCA1-202ENST00000371122 TRAF3IP1Q8TDR0 691 aaPredicted RBP10□□□□□ -0.81
SMARCA1-202ENST00000371122 LZTS2Q9BRK4 669 aa10□□□□□ -0.81
SMARCA1-202ENST00000371122 TSGA10Q9BZW7 698 aa10□□□□□ -0.81
SMARCA1-202ENST00000371122 EPB41L4AQ9HCS5 686 aaPredicted RBP10□□□□□ -0.81
SMARCA1-202ENST00000371122 CD209Q9NNX6 404 aa10□□□□□ -0.81
SMARCA1-202ENST00000371122 RABGAP1Q9Y3P9 1069 aa10□□□□□ -0.81
SMARCA1-202ENST00000371122 TTLL1O95922 423 aa9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 TMOD1P28289 359 aa9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 POLD1P28340 1107 aa9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 TRAF1Q13077 416 aa9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 TRIP13Q15645 432 aaPredicted RBP9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 RESP18Q5W5W9 173 aa9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 TMC4Q7Z404 712 aa9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 POTEDQ86YR6 584 aa9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 CCDC97Q96F63 343 aaPredicted RBP9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 IFT74Q96LB3 600 aa9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 CHP1Q99653 195 aa9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 AMNQ9BXJ7 453 aa9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 EPB41L5Q9HCM4 733 aa9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 TRIM10Q9UDY6 481 aa9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 NCK2O43639 380 aa9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 NDUFA10O95299 355 aa9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 ATF7P17544 494 aaPredicted RBP9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 CTNNA1P35221 906 aaKnown RBP9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 RABL6Q3YEC7 729 aaPredicted RBP9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 SRGAP1Q7Z6B7 1085 aa9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 RNF169Q8NCN4 708 aa9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 NT5C3AQ9H0P0 336 aa9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 UTP11Q9Y3A2 253 aaKnown RBP9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 H2AFZP0C0S5 128 aa9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 POLR2MP0CAP2 368 aa9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 DDIT3P35638 169 aa9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 ARHGEF16Q5VV41 709 aa9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 H2AFVQ71UI9 128 aa9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 DDX12PQ92771 950 aa9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 FAM204AQ9H8W3 233 aa9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 MLXIPQ9HAP2 919 aa9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 ABCB6Q9NP58 842 aa9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 DISC1Q9NRI5 854 aa9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 CICQ96RK0 1608 aaPredicted RBP9.99□□□□□ -0.81
SMARCA1-202ENST00000371122 SIPA1L3O60292 1781 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms