RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 ANKRD13AQ8IZ07 590 aa11.8□□□□□ -0.52
PTPRK-205ENST00000368213 RYBPQ8N488 228 aaPredicted RBP11.8□□□□□ -0.52
PTPRK-205ENST00000368213 ZNF280CQ8ND82 737 aa11.8□□□□□ -0.52
PTPRK-205ENST00000368213 STMN4Q9H169 189 aaPredicted RBP11.8□□□□□ -0.52
PTPRK-205ENST00000368213 TFRCP02786 760 aaKnown RBP11.79□□□□□ -0.52
PTPRK-205ENST00000368213 GPR161Q8N6U8 529 aaKnown RBP11.79□□□□□ -0.52
PTPRK-205ENST00000368213 PPP2R3CQ969Q6 453 aa11.79□□□□□ -0.52
PTPRK-205ENST00000368213 CEP95Q96GE4 821 aa11.79□□□□□ -0.52
PTPRK-205ENST00000368213 ZFP91Q96JP5 570 aaPredicted RBP11.79□□□□□ -0.52
PTPRK-205ENST00000368213 FOXP1Q9H334 677 aaPredicted RBP11.79□□□□□ -0.52
PTPRK-205ENST00000368213 PCDHA6Q9UN73 950 aa11.79□□□□□ -0.52
PTPRK-205ENST00000368213 PCDHA8Q9Y5H6 950 aa11.79□□□□□ -0.52
PTPRK-205ENST00000368213 NRKQ7Z2Y5 1582 aa11.79□□□□□ -0.52
PTPRK-205ENST00000368213 ADAMTS13Q76LX8 1427 aa11.79□□□□□ -0.52
PTPRK-205ENST00000368213 TRIM28Q13263 835 aaKnown RBP11.79□□□□□ -0.52
PTPRK-205ENST00000368213 C4orf50Q6ZRC1 276 aa11.79□□□□□ -0.52
PTPRK-205ENST00000368213 TRMT44Q8IYL2 757 aaKnown RBP11.79□□□□□ -0.52
PTPRK-205ENST00000368213 GTF3C2Q8WUA4 911 aaPredicted RBP11.79□□□□□ -0.52
PTPRK-205ENST00000368213 TMEM47Q9BQJ4 181 aa11.79□□□□□ -0.52
PTPRK-205ENST00000368213 GOLGA6CA6NDK9 693 aa11.79□□□□□ -0.52
PTPRK-205ENST00000368213 GOLGA6BA6NDN3 693 aa11.79□□□□□ -0.52
PTPRK-205ENST00000368213 DPYSL4O14531 572 aa11.79□□□□□ -0.52
PTPRK-205ENST00000368213 RIOK3O14730 519 aaKnown RBP11.79□□□□□ -0.52
PTPRK-205ENST00000368213 GOLGA6DP0CG33 693 aa11.79□□□□□ -0.52
PTPRK-205ENST00000368213 PFKFB1P16118 471 aa11.79□□□□□ -0.52
PTPRK-205ENST00000368213 COG2Q14746 738 aa11.79□□□□□ -0.52
PTPRK-205ENST00000368213 HADHQ16836 314 aaKnown RBP11.79□□□□□ -0.52
PTPRK-205ENST00000368213 OR6J1Q8NGC5 347 aa11.79□□□□□ -0.52
PTPRK-205ENST00000368213 STAG1Q8WVM7 1258 aa11.79□□□□□ -0.52
PTPRK-205ENST00000368213 ADARB2Q9NS39 739 aaKnown RBP11.79□□□□□ -0.52
PTPRK-205ENST00000368213 GOLGA6AQ9NYA3 693 aa11.79□□□□□ -0.52
PTPRK-205ENST00000368213 SLC12A6Q9UHW9 1150 aa11.79□□□□□ -0.52
PTPRK-205ENST00000368213 PRPF3O43395 683 aaKnown RBP11.79□□□□□ -0.52
PTPRK-205ENST00000368213 AK8Q96MA6 479 aa11.79□□□□□ -0.52
PTPRK-205ENST00000368213 PCDHB4Q9Y5E5 795 aa11.79□□□□□ -0.52
PTPRK-205ENST00000368213 KIF28PB7ZC32 967 aa11.78□□□□□ -0.52
PTPRK-205ENST00000368213 GTPBP6O43824 516 aaPredicted RBP11.78□□□□□ -0.52
PTPRK-205ENST00000368213 FCGRTP55899 365 aa11.78□□□□□ -0.52
PTPRK-205ENST00000368213 CASC4Q6P4E1 433 aa11.78□□□□□ -0.52
PTPRK-205ENST00000368213 RRAGAQ7L523 313 aa11.78□□□□□ -0.52
PTPRK-205ENST00000368213 TTC30AQ86WT1 665 aa11.78□□□□□ -0.52
PTPRK-205ENST00000368213 NUCKS1Q9H1E3 243 aaKnown RBP11.78□□□□□ -0.52
PTPRK-205ENST00000368213 DAGLAQ9Y4D2 1042 aa11.78□□□□□ -0.52
PTPRK-205ENST00000368213 CACNB1Q02641 598 aaPredicted RBP11.78□□□□□ -0.52
PTPRK-205ENST00000368213 CTTNQ14247 550 aaKnown RBP11.78□□□□□ -0.52
PTPRK-205ENST00000368213 CCDC26Q8TAB7 109 aa11.78□□□□□ -0.52
PTPRK-205ENST00000368213 FAM149B1Q96BN6 582 aa11.78□□□□□ -0.52
PTPRK-205ENST00000368213 MXD3Q9BW11 206 aa11.78□□□□□ -0.52
PTPRK-205ENST00000368213 DEFB129Q9H1M3 183 aa11.78□□□□□ -0.52
PTPRK-205ENST00000368213 TMEM206Q9H813 350 aa11.78□□□□□ -0.52
PTPRK-205ENST00000368213 MAGEF1Q9HAY2 307 aa11.78□□□□□ -0.52
PTPRK-205ENST00000368213 AGBL3Q8NEM8 1001 aa11.78□□□□□ -0.52
PTPRK-205ENST00000368213 U2AF1L4Q8WU68 220 aaKnown RBP11.78□□□□□ -0.52
PTPRK-205ENST00000368213 PPRC1Q5VV67 1664 aaKnown RBP11.78□□□□□ -0.52
PTPRK-205ENST00000368213 K7ERI5 159 aa11.78□□□□□ -0.52
PTPRK-205ENST00000368213 PHKA2P46019 1235 aa11.78□□□□□ -0.52
PTPRK-205ENST00000368213 MYL7Q01449 175 aa11.78□□□□□ -0.52
PTPRK-205ENST00000368213 GANCQ8TET4 914 aa11.78□□□□□ -0.52
PTPRK-205ENST00000368213 QRICH2Q9H0J4 1663 aa11.78□□□□□ -0.52
PTPRK-205ENST00000368213 LAMC1P11047 1609 aa11.78□□□□□ -0.52
PTPRK-205ENST00000368213 SMIM23A6NLE4 172 aa11.78□□□□□ -0.52
PTPRK-205ENST00000368213 RPN1P04843 607 aaKnown RBP11.78□□□□□ -0.52
PTPRK-205ENST00000368213 FANCCQ00597 558 aa11.78□□□□□ -0.52
PTPRK-205ENST00000368213 CEP57Q86XR8 500 aa11.78□□□□□ -0.52
PTPRK-205ENST00000368213 IFT81Q8WYA0 676 aa11.78□□□□□ -0.52
PTPRK-205ENST00000368213 NT5C1BQ96P26 610 aa11.78□□□□□ -0.52
PTPRK-205ENST00000368213 ZNF302Q9NR11 478 aa11.78□□□□□ -0.52
PTPRK-205ENST00000368213 SCAF8Q9UPN6 1271 aaKnown RBP11.78□□□□□ -0.52
PTPRK-205ENST00000368213 C6orf222P0C671 652 aaPredicted RBP11.77□□□□□ -0.52
PTPRK-205ENST00000368213 BSPRYQ5W0U4 402 aa11.77□□□□□ -0.52
PTPRK-205ENST00000368213 THEM5Q8N1Q8 247 aa11.77□□□□□ -0.52
PTPRK-205ENST00000368213 PDCL2Q8N4E4 241 aa11.77□□□□□ -0.52
PTPRK-205ENST00000368213 NXF1Q9UBU9 619 aaKnown RBP11.77□□□□□ -0.52
PTPRK-205ENST00000368213 UBE2Q2LH0YL09 131 aa11.77□□□□□ -0.53
PTPRK-205ENST00000368213 CLIC6Q96NY7 704 aa11.77□□□□□ -0.53
PTPRK-205ENST00000368213 PCIF1Q9H4Z3 704 aa11.77□□□□□ -0.53
PTPRK-205ENST00000368213 SLC8A2Q9UPR5 921 aa11.77□□□□□ -0.53
PTPRK-205ENST00000368213 GIPC1O14908 333 aa11.77□□□□□ -0.53
PTPRK-205ENST00000368213 ENTPD3O75355 529 aa11.77□□□□□ -0.53
PTPRK-205ENST00000368213 GTF2A2P52657 109 aa11.77□□□□□ -0.53
PTPRK-205ENST00000368213 RASSF7Q02833 373 aa11.77□□□□□ -0.53
PTPRK-205ENST00000368213 NME8Q8N427 588 aa11.77□□□□□ -0.53
PTPRK-205ENST00000368213 USP28Q96RU2 1077 aa11.77□□□□□ -0.53
PTPRK-205ENST00000368213 WDR64B1ANS9 1081 aa11.77□□□□□ -0.53
PTPRK-205ENST00000368213 MAGEA1P43355 309 aa11.77□□□□□ -0.53
PTPRK-205ENST00000368213 SPECC1LQ69YQ0 1117 aa11.77□□□□□ -0.53
PTPRK-205ENST00000368213 CEP128Q6ZU80 1094 aa11.77□□□□□ -0.53
PTPRK-205ENST00000368213 BBS5Q8N3I7 341 aa11.77□□□□□ -0.53
PTPRK-205ENST00000368213 CCDC89Q8N998 374 aa11.77□□□□□ -0.53
PTPRK-205ENST00000368213 OSBPL5Q9H0X9 879 aaPredicted RBP11.77□□□□□ -0.53
PTPRK-205ENST00000368213 CUEDC2Q9H467 287 aa11.77□□□□□ -0.53
PTPRK-205ENST00000368213 ATP6V0A4Q9HBG4 840 aa11.77□□□□□ -0.53
PTPRK-205ENST00000368213 TBC1D22BQ9NU19 505 aa11.77□□□□□ -0.53
PTPRK-205ENST00000368213 DCCP43146 1447 aa11.77□□□□□ -0.53
PTPRK-205ENST00000368213 GYS1P13807 737 aa11.77□□□□□ -0.53
PTPRK-205ENST00000368213 FOXO4P98177 505 aa11.77□□□□□ -0.53
PTPRK-205ENST00000368213 SURF1Q15526 300 aa11.77□□□□□ -0.53
PTPRK-205ENST00000368213 FBXO18Q8NFZ0 1043 aa11.77□□□□□ -0.53
PTPRK-205ENST00000368213 MSTO1Q9BUK6 570 aa11.77□□□□□ -0.53
PTPRK-205ENST00000368213 LRRC4Q9HBW1 653 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms