RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 SPATC1Q76KD6 591 aa6.38□□□□□ -1.39
RNU6-553P-201ENST00000364047 ZNF669Q96BR6 464 aaPredicted RBP6.38□□□□□ -1.39
RNU6-553P-201ENST00000364047 PWWP2AQ96N64 755 aa6.38□□□□□ -1.39
RNU6-553P-201ENST00000364047 SIRPGQ9P1W8 387 aa6.38□□□□□ -1.39
RNU6-553P-201ENST00000364047 COA3Q9Y2R0 106 aaPredicted RBP6.38□□□□□ -1.39
RNU6-553P-201ENST00000364047 TRAV20A0A0B4J274 112 aa6.37□□□□□ -1.39
RNU6-553P-201ENST00000364047 PABPC1P11940 636 aaKnown RBP6.37□□□□□ -1.39
RNU6-553P-201ENST00000364047 LSAMPQ13449 338 aa6.37□□□□□ -1.39
RNU6-553P-201ENST00000364047 RASGRF1Q13972 1273 aa6.37□□□□□ -1.39
RNU6-553P-201ENST00000364047 SF3A1Q15459 793 aaKnown RBP6.37□□□□□ -1.39
RNU6-553P-201ENST00000364047 FBLN7Q53RD9 439 aa6.37□□□□□ -1.39
RNU6-553P-201ENST00000364047 YOD1Q5VVQ6 348 aaPredicted RBP6.37□□□□□ -1.39
RNU6-553P-201ENST00000364047 NSMFQ6X4W1 530 aa6.37□□□□□ -1.39
RNU6-553P-201ENST00000364047 RIOX2Q8IUF8 465 aa6.37□□□□□ -1.39
RNU6-553P-201ENST00000364047 Q8N1Y9 231 aa6.37□□□□□ -1.39
RNU6-553P-201ENST00000364047 SEC14L1Q92503 715 aa6.37□□□□□ -1.39
RNU6-553P-201ENST00000364047 SPATA9Q9BWV2 254 aa6.37□□□□□ -1.39
RNU6-553P-201ENST00000364047 CCDC113Q9H0I3 377 aa6.37□□□□□ -1.39
RNU6-553P-201ENST00000364047 CLDND1Q9NY35 253 aa6.37□□□□□ -1.39
RNU6-553P-201ENST00000364047 NPFFR2Q9Y5X5 522 aa6.37□□□□□ -1.39
RNU6-553P-201ENST00000364047 X6R8D5 127 aa6.37□□□□□ -1.39
RNU6-553P-201ENST00000364047 H7BY64 318 aa6.36□□□□□ -1.39
RNU6-553P-201ENST00000364047 SGSM2O43147 1006 aa6.36□□□□□ -1.39
RNU6-553P-201ENST00000364047 SLC6A11P48066 632 aa6.36□□□□□ -1.39
RNU6-553P-201ENST00000364047 FOXO4P98177 505 aa6.36□□□□□ -1.39
RNU6-553P-201ENST00000364047 SSRP1Q08945 709 aaKnown RBP6.36□□□□□ -1.39
RNU6-553P-201ENST00000364047 B3GNT8Q7Z7M8 397 aa6.36□□□□□ -1.39
RNU6-553P-201ENST00000364047 NLGN1Q8N2Q7 840 aa6.36□□□□□ -1.39
RNU6-553P-201ENST00000364047 OSBP2Q969R2 916 aa6.36□□□□□ -1.39
RNU6-553P-201ENST00000364047 PHF20Q9BVI0 1012 aa6.36□□□□□ -1.39
RNU6-553P-201ENST00000364047 PFDN2Q9UHV9 154 aa6.36□□□□□ -1.39
RNU6-553P-201ENST00000364047 PALD1Q9ULE6 856 aa6.36□□□□□ -1.39
RNU6-553P-201ENST00000364047 RBL2Q08999 1139 aa6.35□□□□□ -1.39
RNU6-553P-201ENST00000364047 IFRD2Q12894 506 aaPredicted RBP6.35□□□□□ -1.39
RNU6-553P-201ENST00000364047 SERINC3Q13530 473 aa6.35□□□□□ -1.39
RNU6-553P-201ENST00000364047 VMACQ2NL98 169 aa6.35□□□□□ -1.39
RNU6-553P-201ENST00000364047 CPA5Q8WXQ8 436 aa6.35□□□□□ -1.39
RNU6-553P-201ENST00000364047 GPR27Q9NS67 375 aa6.35□□□□□ -1.39
RNU6-553P-201ENST00000364047 MSCO60682 206 aa6.34□□□□□ -1.39
RNU6-553P-201ENST00000364047 BMP7P18075 431 aa6.34□□□□□ -1.39
RNU6-553P-201ENST00000364047 CACNB2Q08289 660 aaPredicted RBP6.34□□□□□ -1.39
RNU6-553P-201ENST00000364047 NTRK3Q16288 839 aa6.34□□□□□ -1.39
RNU6-553P-201ENST00000364047 RSPO2Q6UXX9 243 aaPredicted RBP6.34□□□□□ -1.39
RNU6-553P-201ENST00000364047 ETV3LQ6ZN32 361 aa6.34□□□□□ -1.39
RNU6-553P-201ENST00000364047 MILR1Q7Z6M3 343 aa6.34□□□□□ -1.39
RNU6-553P-201ENST00000364047 SMARCC2Q8TAQ2 1214 aa6.34□□□□□ -1.39
RNU6-553P-201ENST00000364047 DCAF4Q8WV16 495 aa6.34□□□□□ -1.39
RNU6-553P-201ENST00000364047 PMF1-BGLAPU3KQ54 211 aa6.34□□□□□ -1.39
RNU6-553P-201ENST00000364047 BLACEA4D250 179 aa6.33□□□□□ -1.4
RNU6-553P-201ENST00000364047 ADCY3O60266 1144 aa6.33□□□□□ -1.4
RNU6-553P-201ENST00000364047 DIAPH1O60610 1272 aaKnown RBP6.33□□□□□ -1.4
RNU6-553P-201ENST00000364047 TRIM13O60858 407 aa6.33□□□□□ -1.4
RNU6-553P-201ENST00000364047 DGKIO75912 1065 aa6.33□□□□□ -1.4
RNU6-553P-201ENST00000364047 PLA2G1BP04054 148 aaKnown RBP6.33□□□□□ -1.4
RNU6-553P-201ENST00000364047 CHRNA2Q15822 529 aa6.33□□□□□ -1.4
RNU6-553P-201ENST00000364047 KCNT2Q6UVM3 1135 aa6.33□□□□□ -1.4
RNU6-553P-201ENST00000364047 FNIP1Q8TF40 1166 aa6.33□□□□□ -1.4
RNU6-553P-201ENST00000364047 DEPDC7Q96QD5 511 aa6.33□□□□□ -1.4
RNU6-553P-201ENST00000364047 CDC6Q99741 560 aa6.33□□□□□ -1.4
RNU6-553P-201ENST00000364047 EPB41L1Q9H4G0 881 aa6.33□□□□□ -1.4
RNU6-553P-201ENST00000364047 HGSO14964 777 aaPredicted RBP6.32□□□□□ -1.4
RNU6-553P-201ENST00000364047 C8BP07358 591 aa6.32□□□□□ -1.4
RNU6-553P-201ENST00000364047 RASA3Q14644 834 aa6.32□□□□□ -1.4
RNU6-553P-201ENST00000364047 SOGA3Q5TF21 947 aa6.32□□□□□ -1.4
RNU6-553P-201ENST00000364047 STEAP3Q658P3 488 aa6.32□□□□□ -1.4
RNU6-553P-201ENST00000364047 LINC01356Q8N9X3 169 aa6.32□□□□□ -1.4
RNU6-553P-201ENST00000364047 PMFBP1Q8TBY8 1022 aa6.32□□□□□ -1.4
RNU6-553P-201ENST00000364047 SREK1Q8WXA9 508 aaKnown RBP6.32□□□□□ -1.4
RNU6-553P-201ENST00000364047 YIPF4Q9BSR8 244 aa6.32□□□□□ -1.4
RNU6-553P-201ENST00000364047 ZCCHC4Q9H5U6 513 aa6.32□□□□□ -1.4
RNU6-553P-201ENST00000364047 SNTG2Q9NY99 539 aa6.32□□□□□ -1.4
RNU6-553P-201ENST00000364047 PPARGC1AQ9UBK2 798 aaKnown RBP6.32□□□□□ -1.4
RNU6-553P-201ENST00000364047 ZNF652Q9Y2D9 606 aa6.32□□□□□ -1.4
RNU6-553P-201ENST00000364047 FAM221BA6H8Z2 402 aa6.31□□□□□ -1.4
RNU6-553P-201ENST00000364047 INHBBP09529 407 aa6.31□□□□□ -1.4
RNU6-553P-201ENST00000364047 CYP2C8P10632 490 aa6.31□□□□□ -1.4
RNU6-553P-201ENST00000364047 GPR85P60893 370 aa6.31□□□□□ -1.4
RNU6-553P-201ENST00000364047 HTRA3P83110 453 aa6.31□□□□□ -1.4
RNU6-553P-201ENST00000364047 KIZQ2M2Z5 673 aa6.31□□□□□ -1.4
RNU6-553P-201ENST00000364047 STYK1Q6J9G0 422 aa6.31□□□□□ -1.4
RNU6-553P-201ENST00000364047 LBX2Q6XYB7 198 aa6.31□□□□□ -1.4
RNU6-553P-201ENST00000364047 DPH6Q7L8W6 267 aa6.31□□□□□ -1.4
RNU6-553P-201ENST00000364047 LRP10Q7Z4F1 713 aa6.31□□□□□ -1.4
RNU6-553P-201ENST00000364047 ZC3H18Q86VM9 953 aaKnown RBP6.31□□□□□ -1.4
RNU6-553P-201ENST00000364047 MIB1Q86YT6 1006 aa6.31□□□□□ -1.4
RNU6-553P-201ENST00000364047 FAM126BQ8IXS8 530 aa6.31□□□□□ -1.4
RNU6-553P-201ENST00000364047 MARCH10Q8NA82 808 aaPredicted RBP6.31□□□□□ -1.4
RNU6-553P-201ENST00000364047 ZBTB38Q8NAP3 1195 aaPredicted RBP6.31□□□□□ -1.4
RNU6-553P-201ENST00000364047 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.31□□□□□ -1.4
RNU6-553P-201ENST00000364047 DDX11Q96FC9 970 aa6.31□□□□□ -1.4
RNU6-553P-201ENST00000364047 IPO9Q96P70 1041 aaKnown RBP6.31□□□□□ -1.4
RNU6-553P-201ENST00000364047 SRPK1Q96SB4 655 aaKnown RBP6.31□□□□□ -1.4
RNU6-553P-201ENST00000364047 DNAJC2Q99543 621 aaKnown RBP6.31□□□□□ -1.4
RNU6-553P-201ENST00000364047 ZFYVE21Q9BQ24 234 aa6.31□□□□□ -1.4
RNU6-553P-201ENST00000364047 JAM3Q9BX67 310 aa6.31□□□□□ -1.4
RNU6-553P-201ENST00000364047 CDIP1Q9H305 208 aa6.31□□□□□ -1.4
RNU6-553P-201ENST00000364047 PCDHB4Q9Y5E5 795 aa6.31□□□□□ -1.4
RNU6-553P-201ENST00000364047 KDM2BQ8NHM5 1336 aa6.3□□□□□ -1.4
RNU6-553P-201ENST00000364047 TRBV23-1A0A0A0MS06 115 aa6.3□□□□□ -1.4
RNU6-553P-201ENST00000364047 FFAR3O14843 346 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms