RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 TNFRSF12AQ9NP84 129 aa6.21□□□□□ -1.42
RNU6-560P-201ENST00000364007 SIT1Q9Y3P8 196 aa6.21□□□□□ -1.42
RNU6-560P-201ENST00000364007 X6R8D5 127 aa6.21□□□□□ -1.42
RNU6-560P-201ENST00000364007 ZC3H12DA2A288 527 aaKnown RBP6.2□□□□□ -1.42
RNU6-560P-201ENST00000364007 ZNF503-AS2A6NEH8 195 aa6.2□□□□□ -1.42
RNU6-560P-201ENST00000364007 NUDT19A8MXV4 375 aa6.2□□□□□ -1.42
RNU6-560P-201ENST00000364007 OPA1O60313 960 aa6.2□□□□□ -1.42
RNU6-560P-201ENST00000364007 DBHP09172 617 aa6.2□□□□□ -1.42
RNU6-560P-201ENST00000364007 GLI4P10075 376 aa6.2□□□□□ -1.42
RNU6-560P-201ENST00000364007 TAL1P17542 331 aaPredicted RBP6.2□□□□□ -1.42
RNU6-560P-201ENST00000364007 GRK2P25098 689 aa6.2□□□□□ -1.42
RNU6-560P-201ENST00000364007 GRK3P35626 688 aa6.2□□□□□ -1.42
RNU6-560P-201ENST00000364007 PDE6BP35913 854 aa6.2□□□□□ -1.42
RNU6-560P-201ENST00000364007 TM4SF20Q53R12 229 aa6.2□□□□□ -1.42
RNU6-560P-201ENST00000364007 ZC3H7AQ8IWR0 971 aaKnown RBP6.2□□□□□ -1.42
RNU6-560P-201ENST00000364007 Q8N1Y9 231 aa6.2□□□□□ -1.42
RNU6-560P-201ENST00000364007 LIN37Q96GY3 246 aaPredicted RBP6.2□□□□□ -1.42
RNU6-560P-201ENST00000364007 SLKQ9H2G2 1235 aaPredicted RBP6.2□□□□□ -1.42
RNU6-560P-201ENST00000364007 KCNK12Q9HB15 430 aa6.2□□□□□ -1.42
RNU6-560P-201ENST00000364007 COQ6Q9Y2Z9 468 aa6.2□□□□□ -1.42
RNU6-560P-201ENST00000364007 HCFC2Q9Y5Z7 792 aa6.2□□□□□ -1.42
RNU6-560P-201ENST00000364007 FAM83GA6ND36 823 aa6.19□□□□□ -1.42
RNU6-560P-201ENST00000364007 FAM47E-STBD1D6RA91 191 aa6.19□□□□□ -1.42
RNU6-560P-201ENST00000364007 CKMP06732 381 aa6.19□□□□□ -1.42
RNU6-560P-201ENST00000364007 PYGMP11217 842 aa6.19□□□□□ -1.42
RNU6-560P-201ENST00000364007 ARL4AP40617 200 aa6.19□□□□□ -1.42
RNU6-560P-201ENST00000364007 MASP1P48740 699 aa6.19□□□□□ -1.42
RNU6-560P-201ENST00000364007 ERVFRD-1P60508 538 aa6.19□□□□□ -1.42
RNU6-560P-201ENST00000364007 WWC2Q6AWC2 1192 aa6.19□□□□□ -1.42
RNU6-560P-201ENST00000364007 LRRTM3Q86VH5 581 aa6.19□□□□□ -1.42
RNU6-560P-201ENST00000364007 KLHL14Q9P2G3 628 aa6.19□□□□□ -1.42
RNU6-560P-201ENST00000364007 MAGEC2Q9UBF1 373 aaPredicted RBP6.19□□□□□ -1.42
RNU6-560P-201ENST00000364007 PLAAQ9Y263 795 aa6.19□□□□□ -1.42
RNU6-560P-201ENST00000364007 A0A087X0B3 334 aa6.18□□□□□ -1.42
RNU6-560P-201ENST00000364007 F8W031 263 aaPredicted RBP6.18□□□□□ -1.42
RNU6-560P-201ENST00000364007 NKRFO15226 690 aaKnown RBP eCLIP6.18□□□□□ -1.42
RNU6-560P-201ENST00000364007 ASLP04424 464 aa6.18□□□□□ -1.42
RNU6-560P-201ENST00000364007 MPOP05164 745 aa6.18□□□□□ -1.42
RNU6-560P-201ENST00000364007 MYCLP1P12525 358 aaPredicted RBP6.18□□□□□ -1.42
RNU6-560P-201ENST00000364007 NAT1P18440 290 aa6.18□□□□□ -1.42
RNU6-560P-201ENST00000364007 DNM2P50570 870 aa6.18□□□□□ -1.42
RNU6-560P-201ENST00000364007 RAB3GAP1Q15042 981 aa6.18□□□□□ -1.42
RNU6-560P-201ENST00000364007 MROH9Q5TGP6 573 aa6.18□□□□□ -1.42
RNU6-560P-201ENST00000364007 RIOX2Q8IUF8 465 aa6.18□□□□□ -1.42
RNU6-560P-201ENST00000364007 MFSD3Q96ES6 412 aa6.18□□□□□ -1.42
RNU6-560P-201ENST00000364007 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.18□□□□□ -1.42
RNU6-560P-201ENST00000364007 CBLCQ9ULV8 474 aa6.18□□□□□ -1.42
RNU6-560P-201ENST00000364007 COA3Q9Y2R0 106 aaPredicted RBP6.18□□□□□ -1.42
RNU6-560P-201ENST00000364007 TCRBV5S4A2TA0A5A2 114 aa6.17□□□□□ -1.42
RNU6-560P-201ENST00000364007 SGSM2O43147 1006 aa6.17□□□□□ -1.42
RNU6-560P-201ENST00000364007 SRGAP3O43295 1099 aa6.17□□□□□ -1.42
RNU6-560P-201ENST00000364007 JMJD7P0C870 316 aa6.17□□□□□ -1.42
RNU6-560P-201ENST00000364007 JUNBP17275 347 aaPredicted RBP6.17□□□□□ -1.42
RNU6-560P-201ENST00000364007 IGFALSP35858 605 aa6.17□□□□□ -1.42
RNU6-560P-201ENST00000364007 PCBP1Q15365 356 aaKnown RBP eCLIP6.17□□□□□ -1.42
RNU6-560P-201ENST00000364007 PAQR3Q6TCH7 311 aa6.17□□□□□ -1.42
RNU6-560P-201ENST00000364007 MPZL3Q6UWV2 235 aa6.17□□□□□ -1.42
RNU6-560P-201ENST00000364007 RPTNQ6XPR3 784 aa6.17□□□□□ -1.42
RNU6-560P-201ENST00000364007 C16orf59Q7L2K0 433 aa6.17□□□□□ -1.42
RNU6-560P-201ENST00000364007 OTOP3Q7RTS5 596 aa6.17□□□□□ -1.42
RNU6-560P-201ENST00000364007 CABP7Q86V35 215 aa6.17□□□□□ -1.42
RNU6-560P-201ENST00000364007 OSTM1Q86WC4 334 aa6.17□□□□□ -1.42
RNU6-560P-201ENST00000364007 IGSF22Q8N9C0 903 aa6.17□□□□□ -1.42
RNU6-560P-201ENST00000364007 PIP4K2CQ8TBX8 421 aa6.17□□□□□ -1.42
RNU6-560P-201ENST00000364007 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.17□□□□□ -1.42
RNU6-560P-201ENST00000364007 DDX1Q92499 740 aaKnown RBP6.17□□□□□ -1.42
RNU6-560P-201ENST00000364007 FBXW5Q969U6 566 aa6.17□□□□□ -1.42
RNU6-560P-201ENST00000364007 TARS2Q9BW92 718 aaKnown RBP6.17□□□□□ -1.42
RNU6-560P-201ENST00000364007 SLC6A17Q9H1V8 727 aa6.17□□□□□ -1.42
RNU6-560P-201ENST00000364007 EPB41L1Q9H4G0 881 aa6.17□□□□□ -1.42
RNU6-560P-201ENST00000364007 BCAS3Q9H6U6 928 aa6.17□□□□□ -1.42
RNU6-560P-201ENST00000364007 CATSPERZQ9NTU4 200 aa6.17□□□□□ -1.42
RNU6-560P-201ENST00000364007 INTS7Q9NVH2 962 aaKnown RBP6.17□□□□□ -1.42
RNU6-560P-201ENST00000364007 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.17□□□□□ -1.42
RNU6-560P-201ENST00000364007 CCDC66A2RUB6 948 aa6.16□□□□□ -1.42
RNU6-560P-201ENST00000364007 OR14I1A6ND48 311 aa6.16□□□□□ -1.42
RNU6-560P-201ENST00000364007 WNT9AO14904 365 aa6.16□□□□□ -1.42
RNU6-560P-201ENST00000364007 DGKIO75912 1065 aa6.16□□□□□ -1.42
RNU6-560P-201ENST00000364007 GLRX3O76003 335 aaKnown RBP6.16□□□□□ -1.42
RNU6-560P-201ENST00000364007 CYBBP04839 570 aa6.16□□□□□ -1.42
RNU6-560P-201ENST00000364007 GNAT1P11488 350 aa6.16□□□□□ -1.42
RNU6-560P-201ENST00000364007 NEK4P51957 841 aa6.16□□□□□ -1.42
RNU6-560P-201ENST00000364007 ST5P78524 1137 aa6.16□□□□□ -1.42
RNU6-560P-201ENST00000364007 PIK3R6Q5UE93 754 aa6.16□□□□□ -1.42
RNU6-560P-201ENST00000364007 CDCA2Q69YH5 1023 aaPredicted RBP6.16□□□□□ -1.42
RNU6-560P-201ENST00000364007 ZCCHC8Q6NZY4 707 aaKnown RBP6.16□□□□□ -1.42
RNU6-560P-201ENST00000364007 PRR23BQ6ZRT6 265 aa6.16□□□□□ -1.42
RNU6-560P-201ENST00000364007 RBM12BQ8IXT5 1001 aaKnown RBP6.16□□□□□ -1.42
RNU6-560P-201ENST00000364007 NETO2Q8NC67 525 aa6.16□□□□□ -1.42
RNU6-560P-201ENST00000364007 DIRC2Q96SL1 478 aa6.16□□□□□ -1.42
RNU6-560P-201ENST00000364007 MTFR1LQ9H019 292 aa6.16□□□□□ -1.42
RNU6-560P-201ENST00000364007 SAMD15Q9P1V8 674 aa6.16□□□□□ -1.42
RNU6-560P-201ENST00000364007 DBR1Q9UK59 544 aaKnown RBP6.16□□□□□ -1.42
RNU6-560P-201ENST00000364007 PLA2G2DQ9UNK4 145 aa6.16□□□□□ -1.42
RNU6-560P-201ENST00000364007 GSG1L2A8MUP6 293 aa6.15□□□□□ -1.42
RNU6-560P-201ENST00000364007 KCNK3O14649 394 aa6.15□□□□□ -1.42
RNU6-560P-201ENST00000364007 AMY2AP04746 511 aa6.15□□□□□ -1.42
RNU6-560P-201ENST00000364007 PDE6AP16499 860 aa6.15□□□□□ -1.42
RNU6-560P-201ENST00000364007 AMY2BP19961 511 aa6.15□□□□□ -1.42
RNU6-560P-201ENST00000364007 JAM2P57087 298 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms