RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 LRRC37A2A6NM11 1700 aa27.78■■■□□ 2.04
ALKAL1-201ENST00000358543 CCDC85CA6NKD9 419 aa27.77■■■□□ 2.04
ALKAL1-201ENST00000358543 SREBF1P36956 1147 aa27.77■■■□□ 2.04
ALKAL1-201ENST00000358543 MRPS9P82933 396 aaKnown RBP27.77■■■□□ 2.04
ALKAL1-201ENST00000358543 U2AF1L4Q8WU68 220 aaKnown RBP27.77■■■□□ 2.04
ALKAL1-201ENST00000358543 SCFD2Q8WU76 684 aa27.77■■■□□ 2.04
ALKAL1-201ENST00000358543 CRISPLD2Q9H0B8 497 aa27.77■■■□□ 2.04
ALKAL1-201ENST00000358543 PDGFCQ9NRA1 345 aa27.77■■■□□ 2.04
ALKAL1-201ENST00000358543 KRT40Q6A162 431 aa27.76■■■□□ 2.03
ALKAL1-201ENST00000358543 HSCBQ8IWL3 235 aa27.76■■■□□ 2.03
ALKAL1-201ENST00000358543 CRYGNQ8WXF5 182 aa27.76■■■□□ 2.03
ALKAL1-201ENST00000358543 INTS4Q96HW7 963 aaKnown RBP27.76■■■□□ 2.03
ALKAL1-201ENST00000358543 PGBD1Q96JS3 809 aa27.76■■■□□ 2.03
ALKAL1-201ENST00000358543 SMC3Q9UQE7 1217 aa27.76■■■□□ 2.03
ALKAL1-201ENST00000358543 MMP1P03956 469 aa27.75■■■□□ 2.03
ALKAL1-201ENST00000358543 RARBP10826 455 aa27.75■■■□□ 2.03
ALKAL1-201ENST00000358543 ADCYAP1R1P41586 468 aa27.75■■■□□ 2.03
ALKAL1-201ENST00000358543 TNFAIP2Q03169 654 aa27.75■■■□□ 2.03
ALKAL1-201ENST00000358543 RASGRP4Q8TDF6 673 aa27.75■■■□□ 2.03
ALKAL1-201ENST00000358543 C8orf76Q96K31 380 aa27.75■■■□□ 2.03
ALKAL1-201ENST00000358543 WDR11Q9BZH6 1224 aa27.75■■■□□ 2.03
ALKAL1-201ENST00000358543 OGDHLQ9ULD0 1010 aa27.75■■■□□ 2.03
ALKAL1-201ENST00000358543 DUSP11O75319 330 aaKnown RBP27.74■■■□□ 2.03
ALKAL1-201ENST00000358543 RGS20O76081 388 aa27.74■■■□□ 2.03
ALKAL1-201ENST00000358543 CYP3A4P08684 503 aa27.74■■■□□ 2.03
ALKAL1-201ENST00000358543 GJB2P29033 226 aa27.74■■■□□ 2.03
ALKAL1-201ENST00000358543 TTLL4Q14679 1199 aa27.74■■■□□ 2.03
ALKAL1-201ENST00000358543 GNPTABQ3T906 1256 aa27.74■■■□□ 2.03
ALKAL1-201ENST00000358543 KCNV1Q6PIU1 500 aa27.74■■■□□ 2.03
ALKAL1-201ENST00000358543 SEPT14Q6ZU15 432 aa27.74■■■□□ 2.03
ALKAL1-201ENST00000358543 FBXO18Q8NFZ0 1043 aa27.74■■■□□ 2.03
ALKAL1-201ENST00000358543 INPP4AQ96PE3 977 aaPredicted RBP27.74■■■□□ 2.03
ALKAL1-201ENST00000358543 BRMS1Q9HCU9 246 aa27.74■■■□□ 2.03
ALKAL1-201ENST00000358543 Q9Y3F1 56 aa27.74■■■□□ 2.03
ALKAL1-201ENST00000358543 BRCA2P51587 3418 aa27.74■■■□□ 2.03
ALKAL1-201ENST00000358543 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.73■■■□□ 2.03
ALKAL1-201ENST00000358543 TGFB3P10600 412 aa27.73■■■□□ 2.03
ALKAL1-201ENST00000358543 SMPD1P17405 629 aa27.73■■■□□ 2.03
ALKAL1-201ENST00000358543 KRT2P35908 639 aa27.73■■■□□ 2.03
ALKAL1-201ENST00000358543 ARHGAP4P98171 946 aa27.73■■■□□ 2.03
ALKAL1-201ENST00000358543 DUSP28Q4G0W2 176 aa27.73■■■□□ 2.03
ALKAL1-201ENST00000358543 CCDC62Q6P9F0 684 aa27.73■■■□□ 2.03
ALKAL1-201ENST00000358543 GNEQ9Y223 722 aaKnown RBP27.73■■■□□ 2.03
ALKAL1-201ENST00000358543 KIAA1217Q5T5P2 1943 aa27.73■■■□□ 2.03
ALKAL1-201ENST00000358543 POTEFA5A3E0 1075 aa27.72■■■□□ 2.03
ALKAL1-201ENST00000358543 NKRFO15226 690 aaKnown RBP eCLIP27.72■■■□□ 2.03
ALKAL1-201ENST00000358543 ADCY6O43306 1168 aa27.72■■■□□ 2.03
ALKAL1-201ENST00000358543 ICAM3P32942 547 aa27.72■■■□□ 2.03
ALKAL1-201ENST00000358543 KRT25Q7Z3Z0 450 aa27.72■■■□□ 2.03
ALKAL1-201ENST00000358543 UBIAD1Q9Y5Z9 338 aa27.72■■■□□ 2.03
ALKAL1-201ENST00000358543 TFRCP02786 760 aaKnown RBP27.71■■■□□ 2.03
ALKAL1-201ENST00000358543 USP11P51784 963 aa27.71■■■□□ 2.03
ALKAL1-201ENST00000358543 SAFBQ15424 915 aaKnown RBP eCLIP27.71■■■□□ 2.03
ALKAL1-201ENST00000358543 ANO1Q5XXA6 986 aa27.71■■■□□ 2.03
ALKAL1-201ENST00000358543 NLRX1Q86UT6 975 aa27.71■■■□□ 2.03
ALKAL1-201ENST00000358543 OXER1Q8TDS5 423 aa27.71■■■□□ 2.03
ALKAL1-201ENST00000358543 RTEL1Q9NZ71 1219 aa27.71■■■□□ 2.03
ALKAL1-201ENST00000358543 DDX41Q9UJV9 622 aaKnown RBP27.71■■■□□ 2.03
ALKAL1-201ENST00000358543 SPATA31C2B4DYI2 1134 aa27.7■■■□□ 2.02
ALKAL1-201ENST00000358543 MAFGO15525 162 aa27.7■■■□□ 2.02
ALKAL1-201ENST00000358543 TXNP10599 105 aaKnown RBP27.7■■■□□ 2.02
ALKAL1-201ENST00000358543 NKX3-2P78367 333 aa27.7■■■□□ 2.02
ALKAL1-201ENST00000358543 DIS3L2Q8IYB7 885 aaKnown RBP27.7■■■□□ 2.02
ALKAL1-201ENST00000358543 ANKLE1Q8NAG6 615 aa27.7■■■□□ 2.02
ALKAL1-201ENST00000358543 GPRASP2Q96D09 838 aa27.7■■■□□ 2.02
ALKAL1-201ENST00000358543 ZFP91Q96JP5 570 aaPredicted RBP27.7■■■□□ 2.02
ALKAL1-201ENST00000358543 XPNPEP3Q9NQH7 507 aa27.7■■■□□ 2.02
ALKAL1-201ENST00000358543 MRVI1Q9Y6F6 885 aa27.7■■■□□ 2.02
ALKAL1-201ENST00000358543 FIBPO43427 364 aa27.69■■■□□ 2.02
ALKAL1-201ENST00000358543 ARIH2O95376 493 aa27.69■■■□□ 2.02
ALKAL1-201ENST00000358543 ITGB5P18084 799 aa27.69■■■□□ 2.02
ALKAL1-201ENST00000358543 FOSBP53539 338 aa27.69■■■□□ 2.02
ALKAL1-201ENST00000358543 GJA9P57773 515 aa27.69■■■□□ 2.02
ALKAL1-201ENST00000358543 NONOQ15233 471 aaKnown RBP eCLIP27.69■■■□□ 2.02
ALKAL1-201ENST00000358543 CEP55Q53EZ4 464 aa27.69■■■□□ 2.02
ALKAL1-201ENST00000358543 ARRDC4Q8NCT1 418 aa27.69■■■□□ 2.02
ALKAL1-201ENST00000358543 TNFRSF25Q93038 417 aa27.69■■■□□ 2.02
ALKAL1-201ENST00000358543 CDHR1Q96JP9 859 aa27.69■■■□□ 2.02
ALKAL1-201ENST00000358543 MXRA8Q9BRK3 442 aa27.69■■■□□ 2.02
ALKAL1-201ENST00000358543 UPF3AQ9H1J1 476 aaKnown RBP27.69■■■□□ 2.02
ALKAL1-201ENST00000358543 JADE2Q9NQC1 790 aa27.69■■■□□ 2.02
ALKAL1-201ENST00000358543 CCDC194A0A1B0GVG4 234 aa27.68■■■□□ 2.02
ALKAL1-201ENST00000358543 BTBD18B2RXH4 712 aa27.68■■■□□ 2.02
ALKAL1-201ENST00000358543 ADAMTS4O75173 837 aa27.68■■■□□ 2.02
ALKAL1-201ENST00000358543 EN2P19622 333 aaPredicted RBP27.68■■■□□ 2.02
ALKAL1-201ENST00000358543 CIITAP33076 1130 aa27.68■■■□□ 2.02
ALKAL1-201ENST00000358543 TMEM63BQ5T3F8 832 aa27.68■■■□□ 2.02
ALKAL1-201ENST00000358543 NIPA1Q7RTP0 329 aa27.68■■■□□ 2.02
ALKAL1-201ENST00000358543 TBCKQ8TEA7 893 aa27.68■■■□□ 2.02
ALKAL1-201ENST00000358543 LENG1Q96BZ8 264 aaPredicted RBP27.68■■■□□ 2.02
ALKAL1-201ENST00000358543 SPC25Q9HBM1 224 aa27.68■■■□□ 2.02
ALKAL1-201ENST00000358543 MEIS1O00470 390 aa27.67■■■□□ 2.02
ALKAL1-201ENST00000358543 ZNF76P36508 570 aa27.67■■■□□ 2.02
ALKAL1-201ENST00000358543 GUCY1B3Q02153 619 aa27.67■■■□□ 2.02
ALKAL1-201ENST00000358543 NR5A1Q13285 461 aa27.67■■■□□ 2.02
ALKAL1-201ENST00000358543 LY6KQ17RY6 165 aa27.67■■■□□ 2.02
ALKAL1-201ENST00000358543 FOXP1Q9H334 677 aaPredicted RBP27.67■■■□□ 2.02
ALKAL1-201ENST00000358543 MYH7BA7E2Y1 1941 aa27.67■■■□□ 2.02
ALKAL1-201ENST00000358543 SYNRGQ9UMZ2 1314 aa27.67■■■□□ 2.02
ALKAL1-201ENST00000358543 EDIL3O43854 480 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms