RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 GTF2A2P52657 109 aa10.69□□□□□ -0.7
GABPA-201ENST00000354828 PPP1R7Q15435 360 aa10.69□□□□□ -0.7
GABPA-201ENST00000354828 PPM1KQ8N3J5 372 aa10.69□□□□□ -0.7
GABPA-201ENST00000354828 CCDC94Q9BW85 323 aaPredicted RBP10.69□□□□□ -0.7
GABPA-201ENST00000354828 NLRC4Q9NPP4 1024 aa10.69□□□□□ -0.7
GABPA-201ENST00000354828 DISC1Q9NRI5 854 aa10.69□□□□□ -0.7
GABPA-201ENST00000354828 NEDD4P46934 1319 aa10.69□□□□□ -0.7
GABPA-201ENST00000354828 ARHGEF28Q8N1W1 1705 aaKnown RBP10.69□□□□□ -0.7
GABPA-201ENST00000354828 NLRP12P59046 1061 aa10.69□□□□□ -0.7
GABPA-201ENST00000354828 CXCL9Q07325 125 aa10.69□□□□□ -0.7
GABPA-201ENST00000354828 KLHL30Q0D2K2 578 aa10.69□□□□□ -0.7
GABPA-201ENST00000354828 SND1Q7KZF4 910 aaKnown RBP eCLIP10.69□□□□□ -0.7
GABPA-201ENST00000354828 CCDC84Q86UT8 332 aaPredicted RBP10.69□□□□□ -0.7
GABPA-201ENST00000354828 GPRC5AQ8NFJ5 357 aa10.69□□□□□ -0.7
GABPA-201ENST00000354828 NEDD1Q8NHV4 660 aa10.69□□□□□ -0.7
GABPA-201ENST00000354828 LPAR1Q92633 364 aa10.69□□□□□ -0.7
GABPA-201ENST00000354828 ACCSQ96QU6 501 aa10.69□□□□□ -0.7
GABPA-201ENST00000354828 IQCGQ9H095 443 aaKnown RBP10.69□□□□□ -0.7
GABPA-201ENST00000354828 SLITRK6Q9H5Y7 841 aa10.69□□□□□ -0.7
GABPA-201ENST00000354828 FAM207AQ9NSI2 230 aaPredicted RBP10.69□□□□□ -0.7
GABPA-201ENST00000354828 GSG1L2A8MUP6 293 aa10.68□□□□□ -0.7
GABPA-201ENST00000354828 WDR46O15213 610 aaKnown RBP10.68□□□□□ -0.7
GABPA-201ENST00000354828 GAP43P17677 238 aa10.68□□□□□ -0.7
GABPA-201ENST00000354828 QRICH1Q2TAL8 776 aa10.68□□□□□ -0.7
GABPA-201ENST00000354828 LDHDQ86WU2 507 aa10.68□□□□□ -0.7
GABPA-201ENST00000354828 TCP11Q8WWU5 503 aa10.68□□□□□ -0.7
GABPA-201ENST00000354828 NDC80O14777 642 aa10.68□□□□□ -0.7
GABPA-201ENST00000354828 TFRCP02786 760 aaKnown RBP10.68□□□□□ -0.7
GABPA-201ENST00000354828 TXNP10599 105 aaKnown RBP10.68□□□□□ -0.7
GABPA-201ENST00000354828 FCGRTP55899 365 aa10.68□□□□□ -0.7
GABPA-201ENST00000354828 MAP2K1Q02750 393 aaPredicted RBP10.68□□□□□ -0.7
GABPA-201ENST00000354828 TMTC3Q6ZXV5 915 aa10.68□□□□□ -0.7
GABPA-201ENST00000354828 AK8Q96MA6 479 aa10.68□□□□□ -0.7
GABPA-201ENST00000354828 ZNF830Q96NB3 372 aaPredicted RBP10.68□□□□□ -0.7
GABPA-201ENST00000354828 NUP58Q9BVL2 599 aa10.68□□□□□ -0.7
GABPA-201ENST00000354828 MYO1AQ9UBC5 1043 aa10.68□□□□□ -0.7
GABPA-201ENST00000354828 K7ERI5 159 aa10.68□□□□□ -0.7
GABPA-201ENST00000354828 DYNC1LI2O43237 492 aaPredicted RBP10.68□□□□□ -0.7
GABPA-201ENST00000354828 GTPBP6O43824 516 aaPredicted RBP10.68□□□□□ -0.7
GABPA-201ENST00000354828 OATP04181 439 aa10.68□□□□□ -0.7
GABPA-201ENST00000354828 C12orf60Q5U649 245 aa10.68□□□□□ -0.7
GABPA-201ENST00000354828 SCYL2Q6P3W7 929 aa10.68□□□□□ -0.7
GABPA-201ENST00000354828 OR6J1Q8NGC5 347 aa10.68□□□□□ -0.7
GABPA-201ENST00000354828 GTF3C2Q8WUA4 911 aaPredicted RBP10.68□□□□□ -0.7
GABPA-201ENST00000354828 SREK1Q8WXA9 508 aaKnown RBP10.68□□□□□ -0.7
GABPA-201ENST00000354828 NUDT12Q9BQG2 462 aa10.68□□□□□ -0.7
GABPA-201ENST00000354828 POLLQ9UGP5 575 aa10.68□□□□□ -0.7
GABPA-201ENST00000354828 TRIM14Q14142 442 aa10.68□□□□□ -0.7
GABPA-201ENST00000354828 CCDC122Q5T0U0 273 aa10.68□□□□□ -0.7
GABPA-201ENST00000354828 POTEAQ6S8J7 498 aa10.68□□□□□ -0.7
GABPA-201ENST00000354828 TDRD7Q8NHU6 1098 aaKnown RBP10.68□□□□□ -0.7
GABPA-201ENST00000354828 WDR64B1ANS9 1081 aa10.67□□□□□ -0.7
GABPA-201ENST00000354828 CTNND1O60716 968 aaKnown RBP10.67□□□□□ -0.7
GABPA-201ENST00000354828 MMP1P03956 469 aa10.67□□□□□ -0.7
GABPA-201ENST00000354828 PTPREP23469 700 aa10.67□□□□□ -0.7
GABPA-201ENST00000354828 DSTYKQ6XUX3 929 aa10.67□□□□□ -0.7
GABPA-201ENST00000354828 ENAHQ8N8S7 591 aaPredicted RBP10.67□□□□□ -0.7
GABPA-201ENST00000354828 NSUN7Q8NE18 718 aaKnown RBP10.67□□□□□ -0.7
GABPA-201ENST00000354828 CCDC77Q9BR77 488 aa10.67□□□□□ -0.7
GABPA-201ENST00000354828 CSRNP2Q9H175 543 aa10.67□□□□□ -0.7
GABPA-201ENST00000354828 TBC1D22BQ9NU19 505 aa10.67□□□□□ -0.7
GABPA-201ENST00000354828 DNAI1Q9UI46 699 aa10.67□□□□□ -0.7
GABPA-201ENST00000354828 CLIC4Q9Y696 253 aa10.67□□□□□ -0.7
GABPA-201ENST00000354828 SYNJ2BP-COX16A0A087WUM0 186 aa10.67□□□□□ -0.7
GABPA-201ENST00000354828 FERP16591 822 aa10.67□□□□□ -0.7
GABPA-201ENST00000354828 ADGRF4Q8IZF3 695 aa10.67□□□□□ -0.7
GABPA-201ENST00000354828 ZKSCAN4Q969J2 545 aaPredicted RBP10.67□□□□□ -0.7
GABPA-201ENST00000354828 GCNAQ96QF7 691 aa10.67□□□□□ -0.7
GABPA-201ENST00000354828 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.67□□□□□ -0.7
GABPA-201ENST00000354828 LSM14BQ9BX40 385 aaKnown RBP10.67□□□□□ -0.7
GABPA-201ENST00000354828 METTL14Q9HCE5 456 aaKnown RBP10.67□□□□□ -0.7
GABPA-201ENST00000354828 COX16Q9P0S2 106 aa10.67□□□□□ -0.7
GABPA-201ENST00000354828 KCNJ6P48051 423 aa10.67□□□□□ -0.7
GABPA-201ENST00000354828 RNASE9P60153 205 aaKnown RBP10.67□□□□□ -0.7
GABPA-201ENST00000354828 FBXO33Q7Z6M2 555 aa10.67□□□□□ -0.7
GABPA-201ENST00000354828 TICAM2Q86XR7 235 aa10.67□□□□□ -0.7
GABPA-201ENST00000354828 CCDC155Q8N6L0 562 aa10.67□□□□□ -0.7
GABPA-201ENST00000354828 ZNF302Q9NR11 478 aa10.67□□□□□ -0.7
GABPA-201ENST00000354828 RPN1P04843 607 aaKnown RBP10.67□□□□□ -0.7
GABPA-201ENST00000354828 KRT76Q01546 638 aa10.67□□□□□ -0.7
GABPA-201ENST00000354828 SFMBT2Q5VUG0 894 aa10.67□□□□□ -0.7
GABPA-201ENST00000354828 GBP6Q6ZN66 633 aa10.67□□□□□ -0.7
GABPA-201ENST00000354828 KIAA1524Q8TCG1 905 aa10.67□□□□□ -0.7
GABPA-201ENST00000354828 CAPZA3Q96KX2 299 aa10.67□□□□□ -0.7
GABPA-201ENST00000354828 PCIF1Q9H4Z3 704 aa10.67□□□□□ -0.7
GABPA-201ENST00000354828 A0A1W2PRG0 241 aa10.66□□□□□ -0.7
GABPA-201ENST00000354828 TYW5A2RUC4 315 aaKnown RBP10.66□□□□□ -0.7
GABPA-201ENST00000354828 CDC25AP30304 524 aa10.66□□□□□ -0.7
GABPA-201ENST00000354828 STAT1P42224 750 aa10.66□□□□□ -0.7
GABPA-201ENST00000354828 RPF1Q9H9Y2 349 aaKnown RBP10.66□□□□□ -0.7
GABPA-201ENST00000354828 CTAGE15A4D2H0 777 aa10.66□□□□□ -0.7
GABPA-201ENST00000354828 CTAGE9A4FU28 777 aa10.66□□□□□ -0.7
GABPA-201ENST00000354828 POLRMTO00411 1230 aaKnown RBP10.66□□□□□ -0.7
GABPA-201ENST00000354828 CTAGE8P0CG41 777 aa10.66□□□□□ -0.7
GABPA-201ENST00000354828 ABCD1P33897 745 aa10.66□□□□□ -0.7
GABPA-201ENST00000354828 CTAGE6Q86UF2 777 aa10.66□□□□□ -0.7
GABPA-201ENST00000354828 CTAGE4Q8IX94 777 aa10.66□□□□□ -0.7
GABPA-201ENST00000354828 GOLGA6L7A0A1B0GV03 622 aa10.66□□□□□ -0.7
GABPA-201ENST00000354828 CMA1P23946 247 aa10.66□□□□□ -0.7
GABPA-201ENST00000354828 ERCC5P28715 1186 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms