RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 FOXR2Q6PJQ5 311 aa27.21■■□□□ 1.95
CPNE1-202ENST00000352393 ZNF804AQ7Z570 1209 aa27.21■■□□□ 1.95
CPNE1-202ENST00000352393 SPATA4Q8NEY3 305 aa27.21■■□□□ 1.95
CPNE1-202ENST00000352393 CEP95Q96GE4 821 aa27.21■■□□□ 1.95
CPNE1-202ENST00000352393 ALS2CR12Q96Q35 445 aa27.21■■□□□ 1.95
CPNE1-202ENST00000352393 RIOX1Q9H6W3 641 aa27.21■■□□□ 1.95
CPNE1-202ENST00000352393 MMRN2Q9H8L6 949 aa27.21■■□□□ 1.95
CPNE1-202ENST00000352393 FOCADQ5VW36 1801 aa27.2■■□□□ 1.95
CPNE1-202ENST00000352393 SLC37A4O43826 429 aa27.2■■□□□ 1.95
CPNE1-202ENST00000352393 C10orf67Q8IYJ2 551 aa27.2■■□□□ 1.95
CPNE1-202ENST00000352393 RAD54LQ92698 747 aa27.2■■□□□ 1.95
CPNE1-202ENST00000352393 DRC1Q96MC2 740 aa27.2■■□□□ 1.95
CPNE1-202ENST00000352393 DEF6Q9H4E7 631 aa27.2■■□□□ 1.95
CPNE1-202ENST00000352393 A0A0U1RQG5 324 aaPredicted RBP27.2■■□□□ 1.94
CPNE1-202ENST00000352393 EDIL3O43854 480 aa27.2■■□□□ 1.94
CPNE1-202ENST00000352393 AKR1B10O60218 316 aa27.2■■□□□ 1.94
CPNE1-202ENST00000352393 ZPR1O75312 459 aa27.2■■□□□ 1.94
CPNE1-202ENST00000352393 ASTE1Q2TB18 679 aaPredicted RBP27.2■■□□□ 1.94
CPNE1-202ENST00000352393 PDXDC1Q6P996 788 aa27.2■■□□□ 1.94
CPNE1-202ENST00000352393 HDAC7Q8WUI4 952 aa27.2■■□□□ 1.94
CPNE1-202ENST00000352393 LRRC1Q9BTT6 524 aa27.2■■□□□ 1.94
CPNE1-202ENST00000352393 VAT1LQ9HCJ6 419 aa27.2■■□□□ 1.94
CPNE1-202ENST00000352393 GOLGA6BA6NDN3 693 aa27.19■■□□□ 1.94
CPNE1-202ENST00000352393 SHOX2O60902 331 aaPredicted RBP27.19■■□□□ 1.94
CPNE1-202ENST00000352393 TMEM266Q2M3C6 531 aa27.19■■□□□ 1.94
CPNE1-202ENST00000352393 NFRKBQ6P4R8 1299 aa27.19■■□□□ 1.94
CPNE1-202ENST00000352393 C15orf52Q6ZUT6 534 aaKnown RBP27.19■■□□□ 1.94
CPNE1-202ENST00000352393 RRAGAQ7L523 313 aa27.19■■□□□ 1.94
CPNE1-202ENST00000352393 DYMQ7RTS9 669 aa27.19■■□□□ 1.94
CPNE1-202ENST00000352393 CDK5RAP3Q96JB5 506 aa27.19■■□□□ 1.94
CPNE1-202ENST00000352393 EDEM3Q9BZQ6 932 aa27.19■■□□□ 1.94
CPNE1-202ENST00000352393 DMGDHQ9UI17 866 aaKnown RBP27.19■■□□□ 1.94
CPNE1-202ENST00000352393 GRAPQ13588 217 aa27.19■■□□□ 1.94
CPNE1-202ENST00000352393 TMEM119Q4V9L6 283 aa27.19■■□□□ 1.94
CPNE1-202ENST00000352393 GRAPLQ8TC17 118 aaPredicted RBP27.19■■□□□ 1.94
CPNE1-202ENST00000352393 GPR75-ASB3A0A0A6YYF3 556 aa27.18■■□□□ 1.94
CPNE1-202ENST00000352393 USP17L5A8MUK1 530 aa27.18■■□□□ 1.94
CPNE1-202ENST00000352393 PPFIA4O75335 1185 aa27.18■■□□□ 1.94
CPNE1-202ENST00000352393 TDP2O95551 362 aa27.18■■□□□ 1.94
CPNE1-202ENST00000352393 MAPK8IP2Q13387 824 aaPredicted RBP27.18■■□□□ 1.94
CPNE1-202ENST00000352393 NFIXQ14938 502 aa27.18■■□□□ 1.94
CPNE1-202ENST00000352393 TEX11Q8IYF3 940 aa27.18■■□□□ 1.94
CPNE1-202ENST00000352393 POTEMA6NI47 508 aa27.17■■□□□ 1.94
CPNE1-202ENST00000352393 MAGEA1P43355 309 aa27.17■■□□□ 1.94
CPNE1-202ENST00000352393 UBA5Q9GZZ9 404 aa27.17■■□□□ 1.94
CPNE1-202ENST00000352393 SALL4Q9UJQ4 1053 aa27.17■■□□□ 1.94
CPNE1-202ENST00000352393 SSU72P8A0A1W2PR75 194 aa27.17■■□□□ 1.94
CPNE1-202ENST00000352393 PSMD2Q13200 908 aa27.17■■□□□ 1.94
CPNE1-202ENST00000352393 PDIA5Q14554 519 aa27.17■■□□□ 1.94
CPNE1-202ENST00000352393 ARHGAP27Q6ZUM4 889 aa27.17■■□□□ 1.94
CPNE1-202ENST00000352393 SND1Q7KZF4 910 aaKnown RBP eCLIP27.17■■□□□ 1.94
CPNE1-202ENST00000352393 RIC8AQ9NPQ8 531 aa27.17■■□□□ 1.94
CPNE1-202ENST00000352393 PLIN4Q96Q06 1357 aa27.17■■□□□ 1.94
CPNE1-202ENST00000352393 GNPATO15228 680 aa27.16■■□□□ 1.94
CPNE1-202ENST00000352393 ADCY7P51828 1080 aa27.16■■□□□ 1.94
CPNE1-202ENST00000352393 HGSNATQ68CP4 663 aa27.16■■□□□ 1.94
CPNE1-202ENST00000352393 HAUS3Q68CZ6 603 aa27.16■■□□□ 1.94
CPNE1-202ENST00000352393 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.16■■□□□ 1.94
CPNE1-202ENST00000352393 KCNK18Q7Z418 384 aa27.16■■□□□ 1.94
CPNE1-202ENST00000352393 FAM76AQ8TAV0 307 aa27.16■■□□□ 1.94
CPNE1-202ENST00000352393 SNX29Q8TEQ0 813 aa27.16■■□□□ 1.94
CPNE1-202ENST00000352393 GPR101Q96P66 508 aaPredicted RBP27.16■■□□□ 1.94
CPNE1-202ENST00000352393 NUDT12Q9BQG2 462 aa27.16■■□□□ 1.94
CPNE1-202ENST00000352393 RAB34Q9BZG1 259 aa27.16■■□□□ 1.94
CPNE1-202ENST00000352393 RBAK-RBAKDNI3L0D1 243 aa27.16■■□□□ 1.94
CPNE1-202ENST00000352393 PDHBP11177 359 aa27.16■■□□□ 1.94
CPNE1-202ENST00000352393 TNFRSF8P28908 595 aa27.16■■□□□ 1.94
CPNE1-202ENST00000352393 ZCWPW2Q504Y3 356 aa27.16■■□□□ 1.94
CPNE1-202ENST00000352393 PROM2Q8N271 834 aa27.16■■□□□ 1.94
CPNE1-202ENST00000352393 CCDC155Q8N6L0 562 aa27.16■■□□□ 1.94
CPNE1-202ENST00000352393 GLIS3Q8NEA6 775 aa27.16■■□□□ 1.94
CPNE1-202ENST00000352393 DDX12PQ92771 950 aa27.16■■□□□ 1.94
CPNE1-202ENST00000352393 ZFP91Q96JP5 570 aaPredicted RBP27.16■■□□□ 1.94
CPNE1-202ENST00000352393 TSG101Q99816 390 aa27.16■■□□□ 1.94
CPNE1-202ENST00000352393 TLR10Q9BXR5 811 aa27.16■■□□□ 1.94
CPNE1-202ENST00000352393 LRRC27Q9C0I9 530 aa27.16■■□□□ 1.94
CPNE1-202ENST00000352393 BTAF1O14981 1849 aa27.15■■□□□ 1.94
CPNE1-202ENST00000352393 ATAD5Q96QE3 1844 aa27.15■■□□□ 1.94
CPNE1-202ENST00000352393 ATP2B2Q01814 1243 aa27.15■■□□□ 1.94
CPNE1-202ENST00000352393 MTMR8Q96EF0 704 aa27.15■■□□□ 1.94
CPNE1-202ENST00000352393 TRIM34Q9BYJ4 488 aa27.15■■□□□ 1.94
CPNE1-202ENST00000352393 RSPH14Q9UHP6 348 aa27.15■■□□□ 1.94
CPNE1-202ENST00000352393 GOLGA6CA6NDK9 693 aa27.14■■□□□ 1.94
CPNE1-202ENST00000352393 GOLGA6DP0CG33 693 aa27.14■■□□□ 1.94
CPNE1-202ENST00000352393 KCNMA1Q12791 1236 aa27.14■■□□□ 1.94
CPNE1-202ENST00000352393 SH3GL2Q99962 352 aa27.14■■□□□ 1.94
CPNE1-202ENST00000352393 GOLGA6AQ9NYA3 693 aa27.14■■□□□ 1.94
CPNE1-202ENST00000352393 SMARCAL1Q9NZC9 954 aa27.14■■□□□ 1.94
CPNE1-202ENST00000352393 STIM2Q9P246 746 aa27.14■■□□□ 1.94
CPNE1-202ENST00000352393 NCK2O43639 380 aa27.14■■□□□ 1.93
CPNE1-202ENST00000352393 PLCG2P16885 1265 aa27.14■■□□□ 1.93
CPNE1-202ENST00000352393 SLC1A4P43007 532 aa27.14■■□□□ 1.93
CPNE1-202ENST00000352393 EPHB4P54760 987 aa27.14■■□□□ 1.93
CPNE1-202ENST00000352393 RHBDL3P58872 404 aa27.14■■□□□ 1.93
CPNE1-202ENST00000352393 GFPT1Q06210 699 aaPredicted RBP27.14■■□□□ 1.93
CPNE1-202ENST00000352393 KRT79Q5XKE5 535 aa27.14■■□□□ 1.93
CPNE1-202ENST00000352393 EHD2Q9NZN4 543 aa27.14■■□□□ 1.93
CPNE1-202ENST00000352393 CXCR5P32302 372 aa27.13■■□□□ 1.93
CPNE1-202ENST00000352393 LRRC41Q15345 812 aa27.13■■□□□ 1.93
CPNE1-202ENST00000352393 CCDC181Q5TID7 509 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms