RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 RNF207Q6ZRF8 634 aa16.63■□□□□ 0.25
CXCL12-201ENST00000343575 MYRIPQ8NFW9 859 aa16.63■□□□□ 0.25
CXCL12-201ENST00000343575 GJA10Q969M2 543 aa16.63■□□□□ 0.25
CXCL12-201ENST00000343575 PAGR1Q9BTK6 254 aa16.63■□□□□ 0.25
CXCL12-201ENST00000343575 MOV10L1Q9BXT6 1211 aaKnown RBP16.63■□□□□ 0.25
CXCL12-201ENST00000343575 A1CFQ9NQ94 594 aaKnown RBP16.63■□□□□ 0.25
CXCL12-201ENST00000343575 DDX25Q9UHL0 483 aaKnown RBP16.63■□□□□ 0.25
CXCL12-201ENST00000343575 LCTP09848 1927 aa16.62■□□□□ 0.25
CXCL12-201ENST00000343575 FRMPD4Q14CM0 1322 aa16.62■□□□□ 0.25
CXCL12-201ENST00000343575 IGLV3-22A0A075B6J6 115 aa16.62■□□□□ 0.25
CXCL12-201ENST00000343575 A0A087X0B3 334 aa16.62■□□□□ 0.25
CXCL12-201ENST00000343575 IL31RAQ8NI17 732 aa16.62■□□□□ 0.25
CXCL12-201ENST00000343575 ACAD9Q9H845 621 aa16.62■□□□□ 0.25
CXCL12-201ENST00000343575 KCNMB3Q9NPA1 279 aa16.62■□□□□ 0.25
CXCL12-201ENST00000343575 CYP39A1Q9NYL5 469 aa16.62■□□□□ 0.25
CXCL12-201ENST00000343575 RABGAP1Q9Y3P9 1069 aa16.62■□□□□ 0.25
CXCL12-201ENST00000343575 SLC10A3P09131 477 aa16.61■□□□□ 0.25
CXCL12-201ENST00000343575 CDC25AP30304 524 aa16.61■□□□□ 0.25
CXCL12-201ENST00000343575 CHST13Q8NET6 341 aa16.61■□□□□ 0.25
CXCL12-201ENST00000343575 SYMPKQ92797 1274 aaKnown RBP16.61■□□□□ 0.25
CXCL12-201ENST00000343575 ZFP91Q96JP5 570 aaPredicted RBP16.61■□□□□ 0.25
CXCL12-201ENST00000343575 ZNF202O95125 648 aa16.61■□□□□ 0.25
CXCL12-201ENST00000343575 GTF2F1P35269 517 aaKnown RBP eCLIP16.61■□□□□ 0.25
CXCL12-201ENST00000343575 CALCRLQ16602 461 aa16.61■□□□□ 0.25
CXCL12-201ENST00000343575 Q4G0T1 1027 aa16.61■□□□□ 0.25
CXCL12-201ENST00000343575 DTHD1Q6ZMT9 781 aa16.61■□□□□ 0.25
CXCL12-201ENST00000343575 CCDC73Q6ZRK6 1079 aa16.61■□□□□ 0.25
CXCL12-201ENST00000343575 ETNPPLQ8TBG4 499 aa16.61■□□□□ 0.25
CXCL12-201ENST00000343575 CCDC94Q9BW85 323 aaPredicted RBP16.61■□□□□ 0.25
CXCL12-201ENST00000343575 ASTN1O14525 1302 aa16.6■□□□□ 0.25
CXCL12-201ENST00000343575 PP2D1A8MPX8 630 aa16.6■□□□□ 0.25
CXCL12-201ENST00000343575 IGF2BP3O00425 579 aaKnown RBP eCLIP16.6■□□□□ 0.25
CXCL12-201ENST00000343575 ERCC3P19447 782 aa16.6■□□□□ 0.25
CXCL12-201ENST00000343575 CAMK4Q16566 473 aa16.6■□□□□ 0.25
CXCL12-201ENST00000343575 PRR16Q569H4 304 aa16.6■□□□□ 0.25
CXCL12-201ENST00000343575 CCDC183Q5T5S1 534 aa16.6■□□□□ 0.25
CXCL12-201ENST00000343575 IGSF22Q8N9C0 903 aa16.6■□□□□ 0.25
CXCL12-201ENST00000343575 ZNF784Q8NCA9 323 aaPredicted RBP16.6■□□□□ 0.25
CXCL12-201ENST00000343575 UIMC1Q96RL1 719 aa16.6■□□□□ 0.25
CXCL12-201ENST00000343575 CLSTN2Q9H4D0 955 aa16.6■□□□□ 0.25
CXCL12-201ENST00000343575 DDX19AQ9NUU7 478 aaKnown RBP16.6■□□□□ 0.25
CXCL12-201ENST00000343575 KCNH3Q9ULD8 1083 aa16.6■□□□□ 0.25
CXCL12-201ENST00000343575 TPM3P06753 285 aa16.59■□□□□ 0.25
CXCL12-201ENST00000343575 LONP1P36776 959 aaKnown RBP16.59■□□□□ 0.25
CXCL12-201ENST00000343575 TXKP42681 527 aa16.59■□□□□ 0.25
CXCL12-201ENST00000343575 MRPS9P82933 396 aaKnown RBP16.59■□□□□ 0.25
CXCL12-201ENST00000343575 UTP14CQ5TAP6 766 aaKnown RBP16.59■□□□□ 0.25
CXCL12-201ENST00000343575 ZIC5Q96T25 663 aa16.59■□□□□ 0.25
CXCL12-201ENST00000343575 NAP1L4Q99733 375 aaKnown RBP16.59■□□□□ 0.25
CXCL12-201ENST00000343575 PRDM4Q9UKN5 801 aa16.59■□□□□ 0.25
CXCL12-201ENST00000343575 PNMA3Q9UL41 463 aa16.59■□□□□ 0.25
CXCL12-201ENST00000343575 TMEM88BA6NKF7 163 aa16.59■□□□□ 0.25
CXCL12-201ENST00000343575 ITGB5P18084 799 aa16.59■□□□□ 0.25
CXCL12-201ENST00000343575 TECP42680 631 aa16.59■□□□□ 0.25
CXCL12-201ENST00000343575 SYKP43405 635 aa16.59■□□□□ 0.25
CXCL12-201ENST00000343575 ERVK-9P63128 1117 aa16.59■□□□□ 0.25
CXCL12-201ENST00000343575 ERVK-24P63145 666 aa16.59■□□□□ 0.25
CXCL12-201ENST00000343575 PGM5Q15124 567 aa16.59■□□□□ 0.25
CXCL12-201ENST00000343575 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.59■□□□□ 0.25
CXCL12-201ENST00000343575 NCAPG2Q86XI2 1143 aa16.59■□□□□ 0.25
CXCL12-201ENST00000343575 RMDN3Q96TC7 470 aa16.59■□□□□ 0.25
CXCL12-201ENST00000343575 PDCD2LQ9BRP1 358 aa16.59■□□□□ 0.25
CXCL12-201ENST00000343575 MAF1Q9H063 256 aa16.59■□□□□ 0.25
CXCL12-201ENST00000343575 PORCNQ9H237 461 aa16.59■□□□□ 0.25
CXCL12-201ENST00000343575 PXMP2Q9NR77 195 aa16.59■□□□□ 0.25
CXCL12-201ENST00000343575 MEIS1O00470 390 aa16.58■□□□□ 0.24
CXCL12-201ENST00000343575 MSH4O15457 936 aa16.58■□□□□ 0.24
CXCL12-201ENST00000343575 EIF2AK2P19525 551 aaKnown RBP16.58■□□□□ 0.24
CXCL12-201ENST00000343575 FXR2P51116 673 aaKnown RBP eCLIP16.58■□□□□ 0.24
CXCL12-201ENST00000343575 CNTN2Q02246 1040 aa16.58■□□□□ 0.24
CXCL12-201ENST00000343575 LONRF3Q496Y0 759 aa16.58■□□□□ 0.24
CXCL12-201ENST00000343575 CEP55Q53EZ4 464 aa16.58■□□□□ 0.24
CXCL12-201ENST00000343575 PCNX4Q63HM2 1172 aa16.58■□□□□ 0.24
CXCL12-201ENST00000343575 RBM43Q6ZSC3 357 aaKnown RBP16.58■□□□□ 0.24
CXCL12-201ENST00000343575 MMTAG2Q9BU76 263 aaKnown RBP16.58■□□□□ 0.24
CXCL12-201ENST00000343575 NUP62CLQ9H1M0 184 aa16.58■□□□□ 0.24
CXCL12-201ENST00000343575 SPIRE1Q08AE8 756 aa16.57■□□□□ 0.24
CXCL12-201ENST00000343575 ANKRD13CQ8N6S4 541 aa16.57■□□□□ 0.24
CXCL12-201ENST00000343575 SMCR8Q8TEV9 937 aaPredicted RBP16.57■□□□□ 0.24
CXCL12-201ENST00000343575 TTC12Q9H892 705 aaPredicted RBP16.57■□□□□ 0.24
CXCL12-201ENST00000343575 FBXO40Q9UH90 709 aa16.57■□□□□ 0.24
CXCL12-201ENST00000343575 ABT1Q9ULW3 272 aaKnown RBP16.57■□□□□ 0.24
CXCL12-201ENST00000343575 MANSC4A6NHS7 340 aaPredicted RBP16.56■□□□□ 0.24
CXCL12-201ENST00000343575 POLR2DO15514 142 aaKnown RBP16.56■□□□□ 0.24
CXCL12-201ENST00000343575 SLC25A27O95847 323 aa16.56■□□□□ 0.24
CXCL12-201ENST00000343575 E2F4Q16254 413 aa16.56■□□□□ 0.24
CXCL12-201ENST00000343575 PDILTQ8N807 584 aa16.56■□□□□ 0.24
CXCL12-201ENST00000343575 LRRC15Q8TF66 581 aa16.56■□□□□ 0.24
CXCL12-201ENST00000343575 HHIPL1Q96JK4 782 aa16.56■□□□□ 0.24
CXCL12-201ENST00000343575 MXRA8Q9BRK3 442 aa16.56■□□□□ 0.24
CXCL12-201ENST00000343575 EHMT1Q9H9B1 1298 aa16.56■□□□□ 0.24
CXCL12-201ENST00000343575 MORF4L1Q9UBU8 362 aa16.56■□□□□ 0.24
CXCL12-201ENST00000343575 UBIAD1Q9Y5Z9 338 aa16.56■□□□□ 0.24
CXCL12-201ENST00000343575 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.56■□□□□ 0.24
CXCL12-201ENST00000343575 ADGRA2Q96PE1 1338 aa16.56■□□□□ 0.24
CXCL12-201ENST00000343575 POTEMA6NI47 508 aa16.56■□□□□ 0.24
CXCL12-201ENST00000343575 TBX3O15119 743 aa16.56■□□□□ 0.24
CXCL12-201ENST00000343575 ACTN4O43707 911 aaKnown RBP16.56■□□□□ 0.24
CXCL12-201ENST00000343575 KINO60870 393 aaKnown RBP16.56■□□□□ 0.24
CXCL12-201ENST00000343575 ARP10275 920 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms