RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 MRVI1Q9Y6F6 885 aa22.04■■□□□ 1.12
SYNE4-202ENST00000340477 MYADML2A6NDP7 307 aa22.03■■□□□ 1.12
SYNE4-202ENST00000340477 STXBP3O00186 592 aa22.03■■□□□ 1.12
SYNE4-202ENST00000340477 NEK4P51957 841 aa22.03■■□□□ 1.12
SYNE4-202ENST00000340477 SSRP1Q08945 709 aaKnown RBP22.03■■□□□ 1.12
SYNE4-202ENST00000340477 GNPTABQ3T906 1256 aa22.03■■□□□ 1.12
SYNE4-202ENST00000340477 XRRA1Q6P2D8 792 aa22.03■■□□□ 1.12
SYNE4-202ENST00000340477 CCDC148Q8NFR7 591 aa22.03■■□□□ 1.12
SYNE4-202ENST00000340477 PHKBQ93100 1093 aa22.03■■□□□ 1.12
SYNE4-202ENST00000340477 VTI1AQ96AJ9 217 aa22.03■■□□□ 1.12
SYNE4-202ENST00000340477 FRMPD4Q14CM0 1322 aa22.03■■□□□ 1.12
SYNE4-202ENST00000340477 MEIS2O14770 477 aa22.02■■□□□ 1.12
SYNE4-202ENST00000340477 ASGR1P07306 291 aa22.02■■□□□ 1.12
SYNE4-202ENST00000340477 AK2P54819 239 aa22.02■■□□□ 1.12
SYNE4-202ENST00000340477 NKX3-2P78367 333 aa22.02■■□□□ 1.12
SYNE4-202ENST00000340477 LRRC26Q2I0M4 334 aa22.02■■□□□ 1.12
SYNE4-202ENST00000340477 SLC39A5Q6ZMH5 540 aa22.02■■□□□ 1.12
SYNE4-202ENST00000340477 VSIG10LQ86VR7 867 aa22.02■■□□□ 1.12
SYNE4-202ENST00000340477 LARP6Q9BRS8 491 aaKnown RBP22.02■■□□□ 1.12
SYNE4-202ENST00000340477 RIC8AQ9NPQ8 531 aa22.02■■□□□ 1.12
SYNE4-202ENST00000340477 GTF3C3Q9Y5Q9 886 aa22.02■■□□□ 1.12
SYNE4-202ENST00000340477 SMCO2A6NFE2 343 aa22.01■■□□□ 1.11
SYNE4-202ENST00000340477 CABYRO75952 493 aa22.01■■□□□ 1.11
SYNE4-202ENST00000340477 GH1P01241 217 aa22.01■■□□□ 1.11
SYNE4-202ENST00000340477 RTP1P59025 263 aa22.01■■□□□ 1.11
SYNE4-202ENST00000340477 BEX3Q00994 111 aa22.01■■□□□ 1.11
SYNE4-202ENST00000340477 UBE2SQ16763 222 aa22.01■■□□□ 1.11
SYNE4-202ENST00000340477 C22orf23Q9BZE7 217 aa22.01■■□□□ 1.11
SYNE4-202ENST00000340477 C6orf50Q9HD87 102 aa22.01■■□□□ 1.11
SYNE4-202ENST00000340477 POLR3EQ9NVU0 708 aa22.01■■□□□ 1.11
SYNE4-202ENST00000340477 PRKAG2Q9UGJ0 569 aa22.01■■□□□ 1.11
SYNE4-202ENST00000340477 ATP11BQ9Y2G3 1177 aa22.01■■□□□ 1.11
SYNE4-202ENST00000340477 ELP1O95163 1332 aa22.01■■□□□ 1.11
SYNE4-202ENST00000340477 FOSP01100 380 aaPredicted RBP22■■□□□ 1.11
SYNE4-202ENST00000340477 NTRK3Q16288 839 aa22■■□□□ 1.11
SYNE4-202ENST00000340477 PCNX4Q63HM2 1172 aa22■■□□□ 1.11
SYNE4-202ENST00000340477 CCSAPQ6IQ19 270 aaPredicted RBP22■■□□□ 1.11
SYNE4-202ENST00000340477 IL31RAQ8NI17 732 aa22■■□□□ 1.11
SYNE4-202ENST00000340477 CEP290O15078 2479 aa21.99■■□□□ 1.11
SYNE4-202ENST00000340477 A0A0U1RQG5 324 aaPredicted RBP21.99■■□□□ 1.11
SYNE4-202ENST00000340477 ESYT2A0FGR8 921 aa21.99■■□□□ 1.11
SYNE4-202ENST00000340477 H0YGN5 161 aa21.99■■□□□ 1.11
SYNE4-202ENST00000340477 GNA11P29992 359 aa21.99■■□□□ 1.11
SYNE4-202ENST00000340477 AP3B2Q13367 1082 aa21.99■■□□□ 1.11
SYNE4-202ENST00000340477 SNX17Q15036 470 aa21.99■■□□□ 1.11
SYNE4-202ENST00000340477 C1orf53Q5VUE5 145 aa21.99■■□□□ 1.11
SYNE4-202ENST00000340477 MCTP2Q6DN12 878 aa21.99■■□□□ 1.11
SYNE4-202ENST00000340477 BICD2Q8TD16 824 aa21.99■■□□□ 1.11
SYNE4-202ENST00000340477 TPCN1Q9ULQ1 816 aa21.99■■□□□ 1.11
SYNE4-202ENST00000340477 MROH7Q68CQ1 1323 aa21.99■■□□□ 1.11
SYNE4-202ENST00000340477 CTAGE5O15320 804 aa21.98■■□□□ 1.11
SYNE4-202ENST00000340477 KPNA6O60684 536 aa21.98■■□□□ 1.11
SYNE4-202ENST00000340477 PFKFB2O60825 505 aa21.98■■□□□ 1.11
SYNE4-202ENST00000340477 ARIH2O95376 493 aa21.98■■□□□ 1.11
SYNE4-202ENST00000340477 DEXIO95424 95 aa21.98■■□□□ 1.11
SYNE4-202ENST00000340477 TGFB3P10600 412 aa21.98■■□□□ 1.11
SYNE4-202ENST00000340477 LY6KQ17RY6 165 aa21.98■■□□□ 1.11
SYNE4-202ENST00000340477 TMEM63BQ5T3F8 832 aa21.98■■□□□ 1.11
SYNE4-202ENST00000340477 TYW1BQ6NUM6 668 aa21.98■■□□□ 1.11
SYNE4-202ENST00000340477 CCDC62Q6P9F0 684 aa21.98■■□□□ 1.11
SYNE4-202ENST00000340477 NLRX1Q86UT6 975 aa21.98■■□□□ 1.11
SYNE4-202ENST00000340477 DDX41Q9UJV9 622 aaKnown RBP21.98■■□□□ 1.11
SYNE4-202ENST00000340477 PCDHA6Q9UN73 950 aa21.98■■□□□ 1.11
SYNE4-202ENST00000340477 PCDHA8Q9Y5H6 950 aa21.98■■□□□ 1.11
SYNE4-202ENST00000340477 PPFIA3O75145 1194 aa21.97■■□□□ 1.11
SYNE4-202ENST00000340477 MYL3P08590 195 aa21.97■■□□□ 1.11
SYNE4-202ENST00000340477 IRX5P78411 483 aaPredicted RBP21.97■■□□□ 1.11
SYNE4-202ENST00000340477 TRIM60Q495X7 471 aa21.97■■□□□ 1.11
SYNE4-202ENST00000340477 CXCL17Q6UXB2 119 aa21.97■■□□□ 1.11
SYNE4-202ENST00000340477 DHX37Q8IY37 1157 aaKnown RBP21.97■■□□□ 1.11
SYNE4-202ENST00000340477 COPS5Q92905 334 aa21.97■■□□□ 1.11
SYNE4-202ENST00000340477 CDHR1Q96JP9 859 aa21.97■■□□□ 1.11
SYNE4-202ENST00000340477 SEZ6LQ9BYH1 1024 aa21.97■■□□□ 1.11
SYNE4-202ENST00000340477 SH3GLB2Q9NR46 395 aa21.97■■□□□ 1.11
SYNE4-202ENST00000340477 MYH7BA7E2Y1 1941 aa21.96■■□□□ 1.11
SYNE4-202ENST00000340477 FIBPO43427 364 aa21.96■■□□□ 1.11
SYNE4-202ENST00000340477 PTGS1P23219 599 aa21.96■■□□□ 1.11
SYNE4-202ENST00000340477 SCRN1Q12765 414 aa21.96■■□□□ 1.11
SYNE4-202ENST00000340477 LAMC2Q13753 1193 aa21.96■■□□□ 1.11
SYNE4-202ENST00000340477 PKN1Q16512 942 aa21.96■■□□□ 1.11
SYNE4-202ENST00000340477 REXO1Q8N1G1 1221 aaKnown RBP21.96■■□□□ 1.11
SYNE4-202ENST00000340477 INPP4AQ96PE3 977 aaPredicted RBP21.96■■□□□ 1.11
SYNE4-202ENST00000340477 ANO3Q9BYT9 981 aa21.96■■□□□ 1.11
SYNE4-202ENST00000340477 ZMYND12Q9H0C1 365 aa21.96■■□□□ 1.11
SYNE4-202ENST00000340477 ZMYND8Q9ULU4 1186 aaPredicted RBP21.96■■□□□ 1.11
SYNE4-202ENST00000340477 DCDC2CA8MYV0 355 aa21.95■■□□□ 1.1
SYNE4-202ENST00000340477 PQBP1O60828 265 aaKnown RBP21.95■■□□□ 1.1
SYNE4-202ENST00000340477 XBP1P17861 261 aa21.95■■□□□ 1.1
SYNE4-202ENST00000340477 RBM25P49756 843 aaKnown RBP21.95■■□□□ 1.1
SYNE4-202ENST00000340477 MRPS9P82933 396 aaKnown RBP21.95■■□□□ 1.1
SYNE4-202ENST00000340477 ARHGAP1Q07960 439 aa21.95■■□□□ 1.1
SYNE4-202ENST00000340477 FAM177A1Q8N128 213 aaPredicted RBP21.95■■□□□ 1.1
SYNE4-202ENST00000340477 EMID1Q96A84 441 aaPredicted RBP21.95■■□□□ 1.1
SYNE4-202ENST00000340477 MTG1Q9BT17 334 aaPredicted RBP21.95■■□□□ 1.1
SYNE4-202ENST00000340477 PRDM5Q9NQX1 630 aaPredicted RBP21.95■■□□□ 1.1
SYNE4-202ENST00000340477 RTEL1Q9NZ71 1219 aa21.95■■□□□ 1.1
SYNE4-202ENST00000340477 STK36Q9NRP7 1315 aa21.95■■□□□ 1.1
SYNE4-202ENST00000340477 A6NJR5 290 aa21.94■■□□□ 1.1
SYNE4-202ENST00000340477 TLR3O15455 904 aaKnown RBP21.94■■□□□ 1.1
SYNE4-202ENST00000340477 RGS20O76081 388 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms