RNA–Protein interactions for RNA: ENST00000338458.8

ARHGEF3-202, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-202ENST00000338458 GLT8D2Q9H1C3 349 aa11.32□□□□□ -0.6
ARHGEF3-202ENST00000338458 RNF181Q9P0P0 153 aa11.32□□□□□ -0.6
ARHGEF3-202ENST00000338458 ZHX2Q9Y6X8 837 aa11.32□□□□□ -0.6
ARHGEF3-202ENST00000338458 DDX39AO00148 427 aaKnown RBP11.31□□□□□ -0.6
ARHGEF3-202ENST00000338458 ZNF18P17022 549 aa11.31□□□□□ -0.6
ARHGEF3-202ENST00000338458 TRIM47Q96LD4 638 aa11.31□□□□□ -0.6
ARHGEF3-202ENST00000338458 NFIBO00712 420 aa11.31□□□□□ -0.6
ARHGEF3-202ENST00000338458 HMGCS2P54868 508 aa11.31□□□□□ -0.6
ARHGEF3-202ENST00000338458 AP3B2Q13367 1082 aa11.31□□□□□ -0.6
ARHGEF3-202ENST00000338458 WNK4Q96J92 1243 aa11.31□□□□□ -0.6
ARHGEF3-202ENST00000338458 GPRC5DQ9NZD1 345 aa11.31□□□□□ -0.6
ARHGEF3-202ENST00000338458 ARFGEF1Q9Y6D6 1849 aa11.31□□□□□ -0.6
ARHGEF3-202ENST00000338458 GCFC2P16383 781 aaKnown RBP11.3□□□□□ -0.6
ARHGEF3-202ENST00000338458 USP11P51784 963 aa11.3□□□□□ -0.6
ARHGEF3-202ENST00000338458 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.3□□□□□ -0.6
ARHGEF3-202ENST00000338458 GLIS3Q8NEA6 775 aa11.3□□□□□ -0.6
ARHGEF3-202ENST00000338458 ZNF592Q92610 1267 aa11.3□□□□□ -0.6
ARHGEF3-202ENST00000338458 PURBQ96QR8 312 aaKnown RBP11.3□□□□□ -0.6
ARHGEF3-202ENST00000338458 RPAP3Q9H6T3 665 aaPredicted RBP11.3□□□□□ -0.6
ARHGEF3-202ENST00000338458 FEM1BQ9UK73 627 aa11.3□□□□□ -0.6
ARHGEF3-202ENST00000338458 MSH4O15457 936 aa11.3□□□□□ -0.6
ARHGEF3-202ENST00000338458 MED24O75448 989 aa11.3□□□□□ -0.6
ARHGEF3-202ENST00000338458 VCAM1P19320 739 aa11.3□□□□□ -0.6
ARHGEF3-202ENST00000338458 LMNB1P20700 586 aa11.3□□□□□ -0.6
ARHGEF3-202ENST00000338458 CCZ1BP86790 482 aa11.3□□□□□ -0.6
ARHGEF3-202ENST00000338458 CCZ1P86791 482 aaPredicted RBP11.3□□□□□ -0.6
ARHGEF3-202ENST00000338458 AMPD3Q01432 767 aa11.3□□□□□ -0.6
ARHGEF3-202ENST00000338458 VSTM4Q8IW00 320 aa11.3□□□□□ -0.6
ARHGEF3-202ENST00000338458 DDX12PQ92771 950 aa11.3□□□□□ -0.6
ARHGEF3-202ENST00000338458 CCDC47Q96A33 483 aaKnown RBP11.3□□□□□ -0.6
ARHGEF3-202ENST00000338458 SLF1Q9BQI6 1058 aa11.3□□□□□ -0.6
ARHGEF3-202ENST00000338458 SRRTQ9BXP5 876 aaKnown RBP11.3□□□□□ -0.6
ARHGEF3-202ENST00000338458 RANBP17Q9H2T7 1088 aaKnown RBP11.3□□□□□ -0.6
ARHGEF3-202ENST00000338458 PICK1Q9NRD5 415 aa11.3□□□□□ -0.6
ARHGEF3-202ENST00000338458 ABCB11O95342 1321 aa11.3□□□□□ -0.6
ARHGEF3-202ENST00000338458 CTNND1O60716 968 aaKnown RBP11.3□□□□□ -0.6
ARHGEF3-202ENST00000338458 KRT18P05783 430 aaKnown RBP11.3□□□□□ -0.6
ARHGEF3-202ENST00000338458 PSMC6P62333 389 aa11.3□□□□□ -0.6
ARHGEF3-202ENST00000338458 PDIA5Q14554 519 aa11.3□□□□□ -0.6
ARHGEF3-202ENST00000338458 RAD54LQ92698 747 aa11.3□□□□□ -0.6
ARHGEF3-202ENST00000338458 N4BP3O15049 544 aa11.29□□□□□ -0.6
ARHGEF3-202ENST00000338458 FOSP01100 380 aaPredicted RBP11.29□□□□□ -0.6
ARHGEF3-202ENST00000338458 PABPC4Q13310 644 aaKnown RBP eCLIP11.29□□□□□ -0.6
ARHGEF3-202ENST00000338458 NSMFQ6X4W1 530 aa11.29□□□□□ -0.6
ARHGEF3-202ENST00000338458 FAM160B2Q86V87 743 aa11.29□□□□□ -0.6
ARHGEF3-202ENST00000338458 ADSSL1Q8N142 457 aa11.29□□□□□ -0.6
ARHGEF3-202ENST00000338458 PRPF38AQ8NAV1 312 aaKnown RBP11.29□□□□□ -0.6
ARHGEF3-202ENST00000338458 EMILIN3Q9NT22 766 aa11.29□□□□□ -0.6
ARHGEF3-202ENST00000338458 RGL1Q9NZL6 768 aa11.29□□□□□ -0.6
ARHGEF3-202ENST00000338458 MRPL11Q9Y3B7 192 aaKnown RBP11.29□□□□□ -0.6
ARHGEF3-202ENST00000338458 LTBP3Q9NS15 1303 aa11.29□□□□□ -0.6
ARHGEF3-202ENST00000338458 PEX10O60683 326 aa11.29□□□□□ -0.6
ARHGEF3-202ENST00000338458 SREBF1P36956 1147 aa11.29□□□□□ -0.6
ARHGEF3-202ENST00000338458 ORC2Q13416 577 aaPredicted RBP11.29□□□□□ -0.6
ARHGEF3-202ENST00000338458 STIM1Q13586 685 aa11.29□□□□□ -0.6
ARHGEF3-202ENST00000338458 KCNMB3Q9NPA1 279 aa11.29□□□□□ -0.6
ARHGEF3-202ENST00000338458 RWDD2AQ9UIY3 292 aa11.29□□□□□ -0.6
ARHGEF3-202ENST00000338458 POLR2AP24928 1970 aaKnown RBP11.29□□□□□ -0.6
ARHGEF3-202ENST00000338458 PSMA7O14818 248 aa11.29□□□□□ -0.6
ARHGEF3-202ENST00000338458 RHOBTB3O94955 611 aa11.29□□□□□ -0.6
ARHGEF3-202ENST00000338458 GSDMDP57764 484 aa11.29□□□□□ -0.6
ARHGEF3-202ENST00000338458 KRT31Q15323 416 aa11.29□□□□□ -0.6
ARHGEF3-202ENST00000338458 MUM1L1Q5H9M0 696 aa11.29□□□□□ -0.6
ARHGEF3-202ENST00000338458 DCAF15Q66K64 600 aa11.29□□□□□ -0.6
ARHGEF3-202ENST00000338458 LENG9Q96B70 501 aa11.29□□□□□ -0.6
ARHGEF3-202ENST00000338458 ATG4CQ96DT6 458 aa11.29□□□□□ -0.6
ARHGEF3-202ENST00000338458 WDR18Q9BV38 432 aa11.29□□□□□ -0.6
ARHGEF3-202ENST00000338458 KCNJ18B7U540 433 aa11.28□□□□□ -0.6
ARHGEF3-202ENST00000338458 MAP3K10Q02779 954 aa11.28□□□□□ -0.6
ARHGEF3-202ENST00000338458 CTTNQ14247 550 aaKnown RBP11.28□□□□□ -0.6
ARHGEF3-202ENST00000338458 KCNJ12Q14500 433 aa11.28□□□□□ -0.6
ARHGEF3-202ENST00000338458 C7orf25Q9BPX7 421 aa11.28□□□□□ -0.6
ARHGEF3-202ENST00000338458 CUEDC2Q9H467 287 aa11.28□□□□□ -0.6
ARHGEF3-202ENST00000338458 ADM5C9JUS6 153 aa11.28□□□□□ -0.6
ARHGEF3-202ENST00000338458 PLS1Q14651 629 aa11.28□□□□□ -0.6
ARHGEF3-202ENST00000338458 CEP135Q66GS9 1140 aa11.28□□□□□ -0.6
ARHGEF3-202ENST00000338458 GPBP1Q86WP2 473 aa11.28□□□□□ -0.6
ARHGEF3-202ENST00000338458 CATSPER3Q86XQ3 398 aa11.28□□□□□ -0.6
ARHGEF3-202ENST00000338458 KIAA0895Q8NCT3 520 aa11.28□□□□□ -0.6
ARHGEF3-202ENST00000338458 GIMAP8Q8ND71 665 aaPredicted RBP11.28□□□□□ -0.6
ARHGEF3-202ENST00000338458 ETNPPLQ8TBG4 499 aa11.28□□□□□ -0.6
ARHGEF3-202ENST00000338458 CNKSR2Q8WXI2 1034 aa11.28□□□□□ -0.6
ARHGEF3-202ENST00000338458 COL20A1Q9P218 1284 aa11.28□□□□□ -0.6
ARHGEF3-202ENST00000338458 IMPACTQ9P2X3 320 aa11.28□□□□□ -0.6
ARHGEF3-202ENST00000338458 ZNF536O15090 1300 aa11.28□□□□□ -0.6
ARHGEF3-202ENST00000338458 EML1O00423 815 aa11.28□□□□□ -0.6
ARHGEF3-202ENST00000338458 ZBTB39O15060 712 aa11.28□□□□□ -0.6
ARHGEF3-202ENST00000338458 WDR46O15213 610 aaKnown RBP11.28□□□□□ -0.6
ARHGEF3-202ENST00000338458 ARP10275 920 aa11.28□□□□□ -0.6
ARHGEF3-202ENST00000338458 EIF2AK2P19525 551 aaKnown RBP11.28□□□□□ -0.6
ARHGEF3-202ENST00000338458 FILIP1LQ4L180 1135 aa11.28□□□□□ -0.6
ARHGEF3-202ENST00000338458 ANKRD40Q6AI12 368 aa11.28□□□□□ -0.6
ARHGEF3-202ENST00000338458 NELFCDQ8IXH7 590 aa11.28□□□□□ -0.6
ARHGEF3-202ENST00000338458 GPC2Q8N158 579 aa11.28□□□□□ -0.6
ARHGEF3-202ENST00000338458 CSGALNACT2Q8N6G5 542 aa11.28□□□□□ -0.6
ARHGEF3-202ENST00000338458 PIGOQ8TEQ8 1089 aa11.28□□□□□ -0.6
ARHGEF3-202ENST00000338458 SYT17Q9BSW7 474 aa11.28□□□□□ -0.6
ARHGEF3-202ENST00000338458 BCAS3Q9H6U6 928 aa11.28□□□□□ -0.6
ARHGEF3-202ENST00000338458 NKRFO15226 690 aaKnown RBP eCLIP11.27□□□□□ -0.6
ARHGEF3-202ENST00000338458 PLA2G4BP0C869 781 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms