RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 ATP6V0A4Q9HBG4 840 aa17.53■□□□□ 0.4
NPHP3-201ENST00000337331 PAPOLBQ9NRJ5 636 aaKnown RBP17.53■□□□□ 0.4
NPHP3-201ENST00000337331 ATP8A2Q9NTI2 1148 aa17.53■□□□□ 0.4
NPHP3-201ENST00000337331 XRCC5P13010 732 aaKnown RBP17.52■□□□□ 0.4
NPHP3-201ENST00000337331 IQCDQ96DY2 449 aa17.52■□□□□ 0.4
NPHP3-201ENST00000337331 ARMCX3Q9UH62 379 aaPredicted RBP17.52■□□□□ 0.4
NPHP3-201ENST00000337331 TARSL2A2RTX5 802 aaKnown RBP17.52■□□□□ 0.4
NPHP3-201ENST00000337331 GNAT1P11488 350 aa17.52■□□□□ 0.4
NPHP3-201ENST00000337331 ABCB4P21439 1286 aa17.52■□□□□ 0.4
NPHP3-201ENST00000337331 STAT1P42224 750 aa17.52■□□□□ 0.4
NPHP3-201ENST00000337331 TPH2Q8IWU9 490 aa17.52■□□□□ 0.4
NPHP3-201ENST00000337331 ATP6V1G3Q96LB4 118 aa17.52■□□□□ 0.4
NPHP3-201ENST00000337331 VCX3BQ9H321 246 aa17.52■□□□□ 0.4
NPHP3-201ENST00000337331 VCX3AQ9NNX9 186 aa17.52■□□□□ 0.4
NPHP3-201ENST00000337331 SEC31BQ9NQW1 1179 aa17.52■□□□□ 0.4
NPHP3-201ENST00000337331 L3MBTL1Q9Y468 752 aa17.52■□□□□ 0.4
NPHP3-201ENST00000337331 PHF20L1A8MW92 1017 aa17.52■□□□□ 0.39
NPHP3-201ENST00000337331 FSBPO95073 299 aa17.52■□□□□ 0.39
NPHP3-201ENST00000337331 MTMR3Q13615 1198 aa17.52■□□□□ 0.39
NPHP3-201ENST00000337331 PTGISQ16647 500 aa17.52■□□□□ 0.39
NPHP3-201ENST00000337331 LRRC47Q8N1G4 583 aaKnown RBP17.52■□□□□ 0.39
NPHP3-201ENST00000337331 FNBP4Q8N3X1 1017 aaPredicted RBP17.52■□□□□ 0.39
NPHP3-201ENST00000337331 ABHD10Q9NUJ1 306 aa17.52■□□□□ 0.39
NPHP3-201ENST00000337331 TRPC6Q9Y210 931 aa17.52■□□□□ 0.39
NPHP3-201ENST00000337331 TAF6LQ9Y6J9 622 aa17.52■□□□□ 0.39
NPHP3-201ENST00000337331 FRMPD2Q68DX3 1309 aaPredicted RBP17.52■□□□□ 0.39
NPHP3-201ENST00000337331 FAM107AO95990 144 aa17.51■□□□□ 0.39
NPHP3-201ENST00000337331 IGKV5-2P06315 115 aa17.51■□□□□ 0.39
NPHP3-201ENST00000337331 MYCLP12524 364 aaPredicted RBP17.51■□□□□ 0.39
NPHP3-201ENST00000337331 LONP2Q86WA8 852 aa17.51■□□□□ 0.39
NPHP3-201ENST00000337331 CCDC97Q96F63 343 aaPredicted RBP17.51■□□□□ 0.39
NPHP3-201ENST00000337331 EFCAB6Q5THR3 1501 aa17.51■□□□□ 0.39
NPHP3-201ENST00000337331 KCNK3O14649 394 aa17.51■□□□□ 0.39
NPHP3-201ENST00000337331 DDAH1O94760 285 aa17.51■□□□□ 0.39
NPHP3-201ENST00000337331 MOCS3O95396 460 aa17.51■□□□□ 0.39
NPHP3-201ENST00000337331 TMOD1P28289 359 aa17.51■□□□□ 0.39
NPHP3-201ENST00000337331 LONP1P36776 959 aaKnown RBP17.51■□□□□ 0.39
NPHP3-201ENST00000337331 CTCFP49711 727 aaPredicted RBP17.51■□□□□ 0.39
NPHP3-201ENST00000337331 ADCY2Q08462 1091 aa17.51■□□□□ 0.39
NPHP3-201ENST00000337331 UAP1Q16222 522 aaPredicted RBP17.51■□□□□ 0.39
NPHP3-201ENST00000337331 CCDC105Q8IYK2 499 aa17.51■□□□□ 0.39
NPHP3-201ENST00000337331 CEP63Q96MT8 703 aa17.51■□□□□ 0.39
NPHP3-201ENST00000337331 ZIM3Q96PE6 472 aa17.51■□□□□ 0.39
NPHP3-201ENST00000337331 TUBGCP2Q9BSJ2 902 aa17.51■□□□□ 0.39
NPHP3-201ENST00000337331 DDX20Q9UHI6 824 aaKnown RBP17.51■□□□□ 0.39
NPHP3-201ENST00000337331 CROCC2H7BZ55 1655 aa17.51■□□□□ 0.39
NPHP3-201ENST00000337331 FMNL1O95466 1100 aaPredicted RBP17.51■□□□□ 0.39
NPHP3-201ENST00000337331 MYBL2P10244 700 aa17.51■□□□□ 0.39
NPHP3-201ENST00000337331 ATP2A2P16615 1042 aaKnown RBP17.51■□□□□ 0.39
NPHP3-201ENST00000337331 NSMFQ6X4W1 530 aa17.51■□□□□ 0.39
NPHP3-201ENST00000337331 U2AF1L4Q8WU68 220 aaKnown RBP17.51■□□□□ 0.39
NPHP3-201ENST00000337331 USP40Q9NVE5 1235 aa17.51■□□□□ 0.39
NPHP3-201ENST00000337331 NCAPHQ15003 741 aa17.51■□□□□ 0.39
NPHP3-201ENST00000337331 FAM26FQ5R3K3 315 aa17.51■□□□□ 0.39
NPHP3-201ENST00000337331 KCNV1Q6PIU1 500 aa17.51■□□□□ 0.39
NPHP3-201ENST00000337331 RASGRP2Q7LDG7 609 aa17.51■□□□□ 0.39
NPHP3-201ENST00000337331 B4GALNT2Q8NHY0 566 aa17.51■□□□□ 0.39
NPHP3-201ENST00000337331 CHP1Q99653 195 aa17.51■□□□□ 0.39
NPHP3-201ENST00000337331 PSTPIP2Q9H939 334 aa17.51■□□□□ 0.39
NPHP3-201ENST00000337331 TFR2Q9UP52 801 aa17.51■□□□□ 0.39
NPHP3-201ENST00000337331 TCHHQ07283 1943 aa17.5■□□□□ 0.39
NPHP3-201ENST00000337331 PAPOLAP51003 745 aaKnown RBP17.5■□□□□ 0.39
NPHP3-201ENST00000337331 ZNF131P52739 623 aa17.5■□□□□ 0.39
NPHP3-201ENST00000337331 SEC16BQ96JE7 1060 aa17.5■□□□□ 0.39
NPHP3-201ENST00000337331 KLHL14Q9P2G3 628 aa17.5■□□□□ 0.39
NPHP3-201ENST00000337331 POLR2FP61218 127 aaKnown RBP17.5■□□□□ 0.39
NPHP3-201ENST00000337331 MAP7Q14244 749 aa17.5■□□□□ 0.39
NPHP3-201ENST00000337331 SYCE1Q8N0S2 351 aa17.5■□□□□ 0.39
NPHP3-201ENST00000337331 FUKQ8N0W3 1084 aa17.5■□□□□ 0.39
NPHP3-201ENST00000337331 PSMD1Q99460 953 aa17.5■□□□□ 0.39
NPHP3-201ENST00000337331 TXNDC16Q9P2K2 825 aa17.5■□□□□ 0.39
NPHP3-201ENST00000337331 PLEKHG1Q9ULL1 1385 aa17.5■□□□□ 0.39
NPHP3-201ENST00000337331 LOC102724428A0A0B4J2F2 783 aa17.5■□□□□ 0.39
NPHP3-201ENST00000337331 BCRP11274 1271 aa17.5■□□□□ 0.39
NPHP3-201ENST00000337331 ALDH3A1P30838 453 aa17.5■□□□□ 0.39
NPHP3-201ENST00000337331 FXR1P51114 621 aaKnown RBP eCLIP17.5■□□□□ 0.39
NPHP3-201ENST00000337331 SIK1P57059 783 aa17.5■□□□□ 0.39
NPHP3-201ENST00000337331 RCSD1Q6JBY9 416 aa17.5■□□□□ 0.39
NPHP3-201ENST00000337331 TRPM1Q7Z4N2 1603 aa17.5■□□□□ 0.39
NPHP3-201ENST00000337331 SH2B2O14492 632 aaPredicted RBP17.49■□□□□ 0.39
NPHP3-201ENST00000337331 DYNLL1P63167 89 aaKnown RBP17.49■□□□□ 0.39
NPHP3-201ENST00000337331 EHHADHQ08426 723 aa17.49■□□□□ 0.39
NPHP3-201ENST00000337331 ST3GAL1Q11201 340 aa17.49■□□□□ 0.39
NPHP3-201ENST00000337331 PRR16Q569H4 304 aa17.49■□□□□ 0.39
NPHP3-201ENST00000337331 SREK1Q8WXA9 508 aaKnown RBP17.49■□□□□ 0.39
NPHP3-201ENST00000337331 RAB3IPQ96QF0 476 aaPredicted RBP17.49■□□□□ 0.39
NPHP3-201ENST00000337331 B4DLN1 442 aa17.49■□□□□ 0.39
NPHP3-201ENST00000337331 MMP1P03956 469 aa17.49■□□□□ 0.39
NPHP3-201ENST00000337331 CASP1P29466 404 aa17.49■□□□□ 0.39
NPHP3-201ENST00000337331 FMR1Q06787 632 aaKnown RBP eCLIP17.49■□□□□ 0.39
NPHP3-201ENST00000337331 SUN1O94901 812 aa17.49■□□□□ 0.39
NPHP3-201ENST00000337331 GNA14O95837 355 aa17.49■□□□□ 0.39
NPHP3-201ENST00000337331 MAGOHP61326 146 aaKnown RBP17.49■□□□□ 0.39
NPHP3-201ENST00000337331 LCORLQ8N3X6 602 aa17.49■□□□□ 0.39
NPHP3-201ENST00000337331 TEKT4Q8WW24 435 aa17.49■□□□□ 0.39
NPHP3-201ENST00000337331 MAGOHBQ96A72 148 aaKnown RBP17.49■□□□□ 0.39
NPHP3-201ENST00000337331 DDX23Q9BUQ8 820 aaKnown RBP17.49■□□□□ 0.39
NPHP3-201ENST00000337331 ATP5DP30049 168 aa17.49■□□□□ 0.39
NPHP3-201ENST00000337331 CYP2J2P51589 502 aa17.49■□□□□ 0.39
NPHP3-201ENST00000337331 SH2D4BQ5SQS7 431 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms