RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 ABCC4O15439 1325 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 H3BQV1 296 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 ASAP2O43150 1006 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 ADKP55263 362 aaKnown RBP9.39□□□□□ -0.91
TDP1-201ENST00000335725 ANKRD1Q15327 319 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 QPCTQ16769 361 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 COBLL1Q53SF7 1204 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 IFFO2Q5TF58 517 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 DUS1LQ6P1R4 473 aaKnown RBP9.39□□□□□ -0.91
TDP1-201ENST00000335725 CHMP6Q96FZ7 201 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 HAUS7Q99871 368 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 NSRP1Q9H0G5 558 aaKnown RBP9.39□□□□□ -0.91
TDP1-201ENST00000335725 TPK1Q9H3S4 243 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 TIMMDC1Q9NPL8 285 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 ABCF3Q9NUQ8 709 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 GTF3C4Q9UKN8 822 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 PCDHB2Q9Y5E7 798 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 ADCY9O60503 1353 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 IGF2BP3O00425 579 aaKnown RBP eCLIP9.39□□□□□ -0.91
TDP1-201ENST00000335725 MAP3K7O43318 606 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 ORC4O43929 436 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 PDE5AO76074 875 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 APOEP02649 317 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 ATP1A3P13637 1013 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 TUBA3CQ13748 450 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 DEPDC1Q5TB30 811 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 AGAP9Q5VTM2 703 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 IQCKQ8N0W5 287 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 MMGT1Q8N4V1 131 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 RILPL2Q969X0 211 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 CNOT10Q9H9A5 744 aaKnown RBP9.39□□□□□ -0.91
TDP1-201ENST00000335725 POGZQ7Z3K3 1410 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 GOLGA8TH3BQL2 631 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 GOLGA8HP0CJ92 632 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 DCTN2Q13561 401 aaKnown RBP9.39□□□□□ -0.91
TDP1-201ENST00000335725 ZNF362Q5T0B9 420 aaPredicted RBP9.39□□□□□ -0.91
TDP1-201ENST00000335725 PHLDB3Q6NSJ2 640 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 STK32AQ8WU08 396 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 FAM136AQ96C01 138 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 MMS19Q96T76 1030 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 GGNBP2Q9H3C7 697 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 ETNK2Q9NVF9 386 aa9.39□□□□□ -0.91
TDP1-201ENST00000335725 GPC6Q9Y625 555 aaPredicted RBP9.39□□□□□ -0.91
TDP1-201ENST00000335725 AFF2P51816 1311 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 KANSL1LA0AUZ9 987 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 GCOM1H8Y6P7 765 aaPredicted RBP9.38□□□□□ -0.91
TDP1-201ENST00000335725 MYZAPP0CAP1 466 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 RPL17P18621 184 aaKnown RBP9.38□□□□□ -0.91
TDP1-201ENST00000335725 SERPINB3P29508 390 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 HPDP32754 393 aaPredicted RBP9.38□□□□□ -0.91
TDP1-201ENST00000335725 CTAG1AP78358 180 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 ODF2Q5BJF6 829 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 CCDC174Q6PII3 467 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 KRT27Q7Z3Y8 459 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 GRAMD2AQ8IUY3 354 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 SPERTQ8NA61 448 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 SH3TC2Q8TF17 1288 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 DPF2Q92785 391 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 CEP295NLQ96MC4 621 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 RTFDC1Q9BY42 306 aaPredicted RBP9.38□□□□□ -0.91
TDP1-201ENST00000335725 FHDC1Q9C0D6 1143 aaPredicted RBP9.38□□□□□ -0.91
TDP1-201ENST00000335725 KIAA1522Q9P206 1035 aaPredicted RBP9.38□□□□□ -0.91
TDP1-201ENST00000335725 PPP1R9AQ9ULJ8 1098 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 PSMD14O00487 310 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 TJP3O95049 919 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 R3HDM1Q15032 1099 aaKnown RBP9.38□□□□□ -0.91
TDP1-201ENST00000335725 LIN52Q52LA3 116 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 MREGQ8N565 214 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 GIPC2Q8TF65 315 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 PRCCQ92733 491 aaPredicted RBP9.38□□□□□ -0.91
TDP1-201ENST00000335725 VMP1Q96GC9 406 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 ECT2Q9H8V3 914 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 AASDHPPTQ9NRN7 309 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 FKBP14Q9NWM8 211 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 HSFX1Q9UBD0 423 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 STOML1Q9UBI4 398 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 STK38LQ9Y2H1 464 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 DNMT1P26358 1616 aaKnown RBP9.38□□□□□ -0.91
TDP1-201ENST00000335725 SOWAHDA6NJG2 315 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 NVLO15381 856 aaKnown RBP9.38□□□□□ -0.91
TDP1-201ENST00000335725 CLASP2O75122 1294 aaKnown RBP9.38□□□□□ -0.91
TDP1-201ENST00000335725 GNAI2P04899 355 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 DRD4P21917 467 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 TUFMP49411 452 aaKnown RBP9.38□□□□□ -0.91
TDP1-201ENST00000335725 POU5F1Q01860 360 aaKnown RBP9.38□□□□□ -0.91
TDP1-201ENST00000335725 RCN2Q14257 317 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 FAM133BQ5BKY9 247 aaKnown RBP9.38□□□□□ -0.91
TDP1-201ENST00000335725 TMCO4Q5TGY1 634 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 DAB2IPQ5VWQ8 1189 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 LRIG3Q6UXM1 1119 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 MAEAQ7L5Y9 396 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 TMTC1Q8IUR5 882 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 CROCCP3Q8IVE0 287 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 DCLK2Q8N568 766 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 SPATA17Q96L03 361 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 CCDC43Q96MW1 224 aaKnown RBP9.38□□□□□ -0.91
TDP1-201ENST00000335725 SETDB2Q96T68 719 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 ARHGEF3Q9NR81 526 aa9.38□□□□□ -0.91
TDP1-201ENST00000335725 ABCC5O15440 1437 aa9.37□□□□□ -0.91
TDP1-201ENST00000335725 PNPLA6Q8IY17 1366 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms