RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 ZBTB33Q86T24 672 aa17.75■□□□□ 0.43
PTCH1-201ENST00000331920 STX18Q9P2W9 335 aaKnown RBP17.75■□□□□ 0.43
PTCH1-201ENST00000331920 COPG1Q9Y678 874 aaKnown RBP17.75■□□□□ 0.43
PTCH1-201ENST00000331920 KRT87PA6NCN2 255 aa17.74■□□□□ 0.43
PTCH1-201ENST00000331920 KDM1AO60341 852 aa17.74■□□□□ 0.43
PTCH1-201ENST00000331920 LRRN2O75325 713 aa17.74■□□□□ 0.43
PTCH1-201ENST00000331920 FLCNQ8NFG4 579 aa17.74■□□□□ 0.43
PTCH1-201ENST00000331920 KLC2Q9H0B6 622 aa17.74■□□□□ 0.43
PTCH1-201ENST00000331920 PCDHA12Q9UN75 941 aa17.74■□□□□ 0.43
PTCH1-201ENST00000331920 MXD4Q14582 209 aaPredicted RBP17.74■□□□□ 0.43
PTCH1-201ENST00000331920 SARS2Q9NP81 518 aaKnown RBP17.74■□□□□ 0.43
PTCH1-201ENST00000331920 SLC39A2Q9NP94 309 aa17.74■□□□□ 0.43
PTCH1-201ENST00000331920 RAD50Q92878 1312 aa17.74■□□□□ 0.43
PTCH1-201ENST00000331920 PJA2O43164 708 aa17.74■□□□□ 0.43
PTCH1-201ENST00000331920 SGO2Q562F6 1265 aa17.74■□□□□ 0.43
PTCH1-201ENST00000331920 EFCAB13Q8IY85 973 aa17.74■□□□□ 0.43
PTCH1-201ENST00000331920 NT5C3AQ9H0P0 336 aa17.74■□□□□ 0.43
PTCH1-201ENST00000331920 DBNLQ9UJU6 430 aaKnown RBP17.74■□□□□ 0.43
PTCH1-201ENST00000331920 UBN2Q6ZU65 1347 aa17.74■□□□□ 0.43
PTCH1-201ENST00000331920 PSDA5PKW4 1024 aaPredicted RBP17.74■□□□□ 0.43
PTCH1-201ENST00000331920 MAPK4P31152 587 aa17.74■□□□□ 0.43
PTCH1-201ENST00000331920 HSPH1Q92598 858 aa17.74■□□□□ 0.43
PTCH1-201ENST00000331920 AARS2Q5JTZ9 985 aaKnown RBP17.74■□□□□ 0.43
PTCH1-201ENST00000331920 SERTAD1Q9UHV2 236 aa17.74■□□□□ 0.43
PTCH1-201ENST00000331920 CLCA2Q9UQC9 943 aa17.74■□□□□ 0.43
PTCH1-201ENST00000331920 KHDRBS2Q5VWX1 349 aaKnown RBP17.74■□□□□ 0.43
PTCH1-201ENST00000331920 PHF21AQ96BD5 680 aa17.74■□□□□ 0.43
PTCH1-201ENST00000331920 PATL1Q86TB9 770 aaKnown RBP17.73■□□□□ 0.43
PTCH1-201ENST00000331920 EIF4E1BA6NMX2 242 aaKnown RBP17.73■□□□□ 0.43
PTCH1-201ENST00000331920 SNX21Q969T3 373 aa17.73■□□□□ 0.43
PTCH1-201ENST00000331920 TSC22D3Q99576 134 aa17.73■□□□□ 0.43
PTCH1-201ENST00000331920 SLC9A1P19634 815 aa17.73■□□□□ 0.43
PTCH1-201ENST00000331920 HDAC1Q13547 482 aaPredicted RBP17.73■□□□□ 0.43
PTCH1-201ENST00000331920 NBPF10Q6P3W6 841 aaKnown RBP17.73■□□□□ 0.43
PTCH1-201ENST00000331920 KDM2BQ8NHM5 1336 aa17.73■□□□□ 0.43
PTCH1-201ENST00000331920 WDR64B1ANS9 1081 aa17.73■□□□□ 0.43
PTCH1-201ENST00000331920 ENC1O14682 589 aa17.73■□□□□ 0.43
PTCH1-201ENST00000331920 ESRRAP11474 423 aaPredicted RBP17.73■□□□□ 0.43
PTCH1-201ENST00000331920 TBL3Q12788 808 aaKnown RBP17.73■□□□□ 0.43
PTCH1-201ENST00000331920 ENAHQ8N8S7 591 aaPredicted RBP17.73■□□□□ 0.43
PTCH1-201ENST00000331920 ARMCX3Q9UH62 379 aaPredicted RBP17.73■□□□□ 0.43
PTCH1-201ENST00000331920 CDC37L1Q7L3B6 337 aa17.73■□□□□ 0.43
PTCH1-201ENST00000331920 PCDHB15Q9Y5E8 787 aa17.73■□□□□ 0.43
PTCH1-201ENST00000331920 EIF3CLB5ME19 914 aaKnown RBP17.73■□□□□ 0.43
PTCH1-201ENST00000331920 PRPF4O43172 522 aaKnown RBP eCLIP17.73■□□□□ 0.43
PTCH1-201ENST00000331920 GADD45BO75293 160 aaPredicted RBP17.73■□□□□ 0.43
PTCH1-201ENST00000331920 POLA2Q14181 598 aa17.73■□□□□ 0.43
PTCH1-201ENST00000331920 ANKRD44Q8N8A2 993 aa17.73■□□□□ 0.43
PTCH1-201ENST00000331920 SLC26A7Q8TE54 656 aa17.73■□□□□ 0.43
PTCH1-201ENST00000331920 MKL2Q9ULH7 1088 aa17.73■□□□□ 0.43
PTCH1-201ENST00000331920 TOP2AP11388 1531 aaKnown RBP17.73■□□□□ 0.43
PTCH1-201ENST00000331920 SNX2O60749 519 aa17.73■□□□□ 0.43
PTCH1-201ENST00000331920 MT-ND3P03897 115 aa17.73■□□□□ 0.43
PTCH1-201ENST00000331920 HSPA6P17066 643 aa17.73■□□□□ 0.43
PTCH1-201ENST00000331920 KRT4P19013 534 aa17.73■□□□□ 0.43
PTCH1-201ENST00000331920 C2orf54Q08AI8 447 aa17.73■□□□□ 0.43
PTCH1-201ENST00000331920 CDO1Q16878 200 aa17.73■□□□□ 0.43
PTCH1-201ENST00000331920 ZBTB18Q99592 522 aa17.73■□□□□ 0.43
PTCH1-201ENST00000331920 SNX5Q9Y5X3 404 aa17.73■□□□□ 0.43
PTCH1-201ENST00000331920 DIAPH2O60879 1101 aa17.72■□□□□ 0.43
PTCH1-201ENST00000331920 NIM1KQ8IY84 436 aa17.72■□□□□ 0.43
PTCH1-201ENST00000331920 LRRC59Q96AG4 307 aaKnown RBP17.72■□□□□ 0.43
PTCH1-201ENST00000331920 SMAD5Q99717 465 aaKnown RBP17.72■□□□□ 0.43
PTCH1-201ENST00000331920 TADA3O75528 432 aa17.72■□□□□ 0.43
PTCH1-201ENST00000331920 SLFN14P0C7P3 912 aa17.72■□□□□ 0.43
PTCH1-201ENST00000331920 EDEM3Q9BZQ6 932 aa17.72■□□□□ 0.43
PTCH1-201ENST00000331920 CHMLP26374 656 aa17.72■□□□□ 0.43
PTCH1-201ENST00000331920 RGS9BPQ6ZS82 235 aa17.72■□□□□ 0.43
PTCH1-201ENST00000331920 ZNF711Q9Y462 761 aa17.72■□□□□ 0.43
PTCH1-201ENST00000331920 TROQ12816 1431 aaPredicted RBP17.72■□□□□ 0.43
PTCH1-201ENST00000331920 N4BP1O75113 896 aaKnown RBP17.72■□□□□ 0.43
PTCH1-201ENST00000331920 LBRQ14739 615 aaKnown RBP17.72■□□□□ 0.43
PTCH1-201ENST00000331920 NBPF20Q3BBV1 942 aa17.72■□□□□ 0.43
PTCH1-201ENST00000331920 OR8K1Q8NGG5 319 aa17.72■□□□□ 0.43
PTCH1-201ENST00000331920 ARIH2O95376 493 aa17.72■□□□□ 0.43
PTCH1-201ENST00000331920 PTK2Q05397 1052 aa17.72■□□□□ 0.43
PTCH1-201ENST00000331920 C8orf58Q8NAV2 365 aa17.72■□□□□ 0.43
PTCH1-201ENST00000331920 MYO1FO00160 1098 aa17.72■□□□□ 0.43
PTCH1-201ENST00000331920 F5H423 210 aaPredicted RBP17.71■□□□□ 0.43
PTCH1-201ENST00000331920 H7C1D1 291 aa17.71■□□□□ 0.43
PTCH1-201ENST00000331920 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.71■□□□□ 0.43
PTCH1-201ENST00000331920 PLTPP55058 493 aa17.71■□□□□ 0.43
PTCH1-201ENST00000331920 LRRC47Q8N1G4 583 aaKnown RBP17.71■□□□□ 0.43
PTCH1-201ENST00000331920 ANKRD13CQ8N6S4 541 aa17.71■□□□□ 0.43
PTCH1-201ENST00000331920 PSTPIP2Q9H939 334 aa17.71■□□□□ 0.43
PTCH1-201ENST00000331920 DNAJC17Q9NVM6 304 aaKnown RBP17.71■□□□□ 0.43
PTCH1-201ENST00000331920 AFF4Q9UHB7 1163 aaKnown RBP17.71■□□□□ 0.43
PTCH1-201ENST00000331920 ACEP12821 1306 aa17.71■□□□□ 0.43
PTCH1-201ENST00000331920 KRT1P04264 644 aa17.71■□□□□ 0.43
PTCH1-201ENST00000331920 OSTNP61366 133 aa17.71■□□□□ 0.43
PTCH1-201ENST00000331920 ZNF507Q8TCN5 953 aa17.71■□□□□ 0.43
PTCH1-201ENST00000331920 GJA10Q969M2 543 aa17.71■□□□□ 0.43
PTCH1-201ENST00000331920 XAGE2Q96GT9 111 aa17.71■□□□□ 0.43
PTCH1-201ENST00000331920 KPNA2P52292 529 aaKnown RBP17.71■□□□□ 0.43
PTCH1-201ENST00000331920 DEPDC1Q5TB30 811 aa17.71■□□□□ 0.43
PTCH1-201ENST00000331920 RNF219Q5W0B1 726 aaPredicted RBP17.71■□□□□ 0.43
PTCH1-201ENST00000331920 TCP10L2B9ZVM9 353 aa17.71■□□□□ 0.43
PTCH1-201ENST00000331920 NEMP1O14524 444 aa17.71■□□□□ 0.43
PTCH1-201ENST00000331920 SUPT3HO75486 399 aa17.71■□□□□ 0.43
PTCH1-201ENST00000331920 KRT17Q04695 432 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms