RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 AP3B2Q13367 1082 aa8.46□□□□□ -1.05
IFT88-201ENST00000319980 NBPF9Q3BBW0 867 aa8.46□□□□□ -1.05
IFT88-201ENST00000319980 FAM83BQ5T0W9 1011 aa8.46□□□□□ -1.05
IFT88-201ENST00000319980 REXO1L1PQ8IX06 675 aa8.46□□□□□ -1.05
IFT88-201ENST00000319980 PANX2Q96RD6 677 aa8.46□□□□□ -1.05
IFT88-201ENST00000319980 NAP1L4Q99733 375 aaKnown RBP8.46□□□□□ -1.05
IFT88-201ENST00000319980 MAGEC2Q9UBF1 373 aaPredicted RBP8.46□□□□□ -1.05
IFT88-201ENST00000319980 DNAI1Q9UI46 699 aa8.46□□□□□ -1.05
IFT88-201ENST00000319980 ZBTB21Q9ULJ3 1066 aa8.46□□□□□ -1.05
IFT88-201ENST00000319980 TMX2Q9Y320 296 aa8.46□□□□□ -1.05
IFT88-201ENST00000319980 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.46□□□□□ -1.05
IFT88-201ENST00000319980 CNTNAP1P78357 1384 aa8.46□□□□□ -1.05
IFT88-201ENST00000319980 BICDL2A1A5D9 508 aa8.46□□□□□ -1.06
IFT88-201ENST00000319980 WNT10BO00744 389 aa8.46□□□□□ -1.06
IFT88-201ENST00000319980 SIPA1L1O43166 1804 aa8.46□□□□□ -1.06
IFT88-201ENST00000319980 CTIFO43310 598 aaKnown RBP8.46□□□□□ -1.06
IFT88-201ENST00000319980 MFAP3LO75121 409 aa8.46□□□□□ -1.06
IFT88-201ENST00000319980 TPM1P09493 284 aa8.46□□□□□ -1.06
IFT88-201ENST00000319980 CCNE1P24864 410 aa8.46□□□□□ -1.06
IFT88-201ENST00000319980 ETF1P62495 437 aaKnown RBP8.46□□□□□ -1.06
IFT88-201ENST00000319980 BTNL9Q6UXG8 535 aa8.46□□□□□ -1.06
IFT88-201ENST00000319980 UNC13DQ70J99 1090 aa8.46□□□□□ -1.06
IFT88-201ENST00000319980 FCHSD1Q86WN1 690 aa8.46□□□□□ -1.06
IFT88-201ENST00000319980 CNGA4Q8IV77 575 aa8.46□□□□□ -1.06
IFT88-201ENST00000319980 AGBL3Q8NEM8 1001 aa8.46□□□□□ -1.06
IFT88-201ENST00000319980 ZC3H15Q8WU90 426 aaKnown RBP8.46□□□□□ -1.06
IFT88-201ENST00000319980 DUSP9Q99956 384 aaKnown RBP8.46□□□□□ -1.06
IFT88-201ENST00000319980 THAP9Q9H5L6 903 aa8.46□□□□□ -1.06
IFT88-201ENST00000319980 KCNMB3Q9NPA1 279 aa8.46□□□□□ -1.06
IFT88-201ENST00000319980 KIAA1024Q9UPX6 916 aa8.46□□□□□ -1.06
IFT88-201ENST00000319980 GREB1LQ9C091 1923 aaPredicted RBP8.46□□□□□ -1.06
IFT88-201ENST00000319980 COL4A5P29400 1685 aa8.46□□□□□ -1.06
IFT88-201ENST00000319980 ITIH6Q6UXX5 1313 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 PVALEFA0A1B0GWK0 134 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 EEF1GP26641 437 aaKnown RBP8.45□□□□□ -1.06
IFT88-201ENST00000319980 POLD1P28340 1107 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 HOXD11P31277 338 aaPredicted RBP8.45□□□□□ -1.06
IFT88-201ENST00000319980 STAT3P40763 770 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 CCDC84Q86UT8 332 aaPredicted RBP8.45□□□□□ -1.06
IFT88-201ENST00000319980 ZNF710Q8N1W2 664 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 JDP2Q8WYK2 163 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 KIFC2Q96AC6 838 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 FHDC1Q9C0D6 1143 aaPredicted RBP8.45□□□□□ -1.06
IFT88-201ENST00000319980 GOPCQ9HD26 462 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 MYH4Q9Y623 1939 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 CYP3A7-CYP3A51PA0A087WV96 503 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 SHTN1A0MZ66 631 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 DCAF8L1A6NGE4 600 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 E9PMD0 336 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 FAM86B1E9PN63 330 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 RNF225M0QZC1 329 aaPredicted RBP8.45□□□□□ -1.06
IFT88-201ENST00000319980 OPLAHO14841 1288 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 FAM86B2P0C5J1 330 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 CYP3A7P24462 503 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 NAA30Q147X3 362 aaPredicted RBP8.45□□□□□ -1.06
IFT88-201ENST00000319980 TMEM119Q4V9L6 283 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 TRIM65Q6PJ69 517 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 SLFN12Q8IYM2 578 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 TUBGCP2Q9BSJ2 902 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 POTEB3A0JP26 581 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 POTECB2RU33 542 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 B4DLN1 442 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 CFBP00751 764 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 FOSP01100 380 aaPredicted RBP8.45□□□□□ -1.06
IFT88-201ENST00000319980 PPP1R2P41236 205 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 CCDC174Q6PII3 467 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 POTEBQ6S5H4 581 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 MB21D1Q8N884 522 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 CYP2W1Q8TAV3 490 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 CRYGNQ8WXF5 182 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 GLIS2Q9BZE0 524 aaPredicted RBP8.45□□□□□ -1.06
IFT88-201ENST00000319980 LRRC27Q9C0I9 530 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 NT5C3AQ9H0P0 336 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 VPS33BQ9H267 617 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 SEMA6BQ9H3T3 888 aa8.45□□□□□ -1.06
IFT88-201ENST00000319980 ZNF215Q9UL58 517 aaPredicted RBP8.45□□□□□ -1.06
IFT88-201ENST00000319980 COL2A1P02458 1487 aaPredicted RBP8.44□□□□□ -1.06
IFT88-201ENST00000319980 LGALS16A8MUM7 142 aa8.44□□□□□ -1.06
IFT88-201ENST00000319980 RRP9O43818 475 aaKnown RBP8.44□□□□□ -1.06
IFT88-201ENST00000319980 KRT9P35527 623 aa8.44□□□□□ -1.06
IFT88-201ENST00000319980 ZNF76P36508 570 aa8.44□□□□□ -1.06
IFT88-201ENST00000319980 SREBF1P36956 1147 aa8.44□□□□□ -1.06
IFT88-201ENST00000319980 CAP2P40123 477 aa8.44□□□□□ -1.06
IFT88-201ENST00000319980 RAD51AP2Q09MP3 1159 aa8.44□□□□□ -1.06
IFT88-201ENST00000319980 LRRC41Q15345 812 aa8.44□□□□□ -1.06
IFT88-201ENST00000319980 DALRD3Q5D0E6 543 aaKnown RBP8.44□□□□□ -1.06
IFT88-201ENST00000319980 FKBP1CQ5VVH2 108 aa8.44□□□□□ -1.06
IFT88-201ENST00000319980 MCTP2Q6DN12 878 aa8.44□□□□□ -1.06
IFT88-201ENST00000319980 CIAPIN1Q6FI81 312 aa8.44□□□□□ -1.06
IFT88-201ENST00000319980 RAD9BQ6WBX8 426 aa8.44□□□□□ -1.06
IFT88-201ENST00000319980 FAM83AQ86UY5 434 aa8.44□□□□□ -1.06
IFT88-201ENST00000319980 GLIS3Q8NEA6 775 aa8.44□□□□□ -1.06
IFT88-201ENST00000319980 TBC1D5Q92609 795 aa8.44□□□□□ -1.06
IFT88-201ENST00000319980 CNOT6LQ96LI5 555 aaKnown RBP8.44□□□□□ -1.06
IFT88-201ENST00000319980 NAA15Q9BXJ9 866 aaKnown RBP8.44□□□□□ -1.06
IFT88-201ENST00000319980 GTPBP4Q9BZE4 634 aaKnown RBP8.44□□□□□ -1.06
IFT88-201ENST00000319980 TAOK3Q9H2K8 898 aa8.44□□□□□ -1.06
IFT88-201ENST00000319980 MYOZ2Q9NPC6 264 aa8.44□□□□□ -1.06
IFT88-201ENST00000319980 BMP2KQ9NSY1 1161 aaPredicted RBP8.44□□□□□ -1.06
IFT88-201ENST00000319980 ABHD10Q9NUJ1 306 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms