RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 SNRNP48Q6IEG0 339 aaKnown RBP10.29□□□□□ -0.76
TMEM39A-201ENST00000319172 AGBL3Q8NEM8 1001 aa10.29□□□□□ -0.76
TMEM39A-201ENST00000319172 ZBTB9Q96C00 473 aa10.29□□□□□ -0.76
TMEM39A-201ENST00000319172 OTUD5Q96G74 571 aa10.29□□□□□ -0.76
TMEM39A-201ENST00000319172 FAM163AQ96GL9 167 aaPredicted RBP10.29□□□□□ -0.76
TMEM39A-201ENST00000319172 MAP7D2Q96T17 732 aa10.29□□□□□ -0.76
TMEM39A-201ENST00000319172 ABCB11O95342 1321 aa10.29□□□□□ -0.76
TMEM39A-201ENST00000319172 VEGFAP15692 232 aaPredicted RBP10.29□□□□□ -0.76
TMEM39A-201ENST00000319172 SHMT1P34896 483 aa10.29□□□□□ -0.76
TMEM39A-201ENST00000319172 TRIM14Q14142 442 aa10.29□□□□□ -0.76
TMEM39A-201ENST00000319172 TMCO3Q6UWJ1 677 aa10.29□□□□□ -0.76
TMEM39A-201ENST00000319172 CYP26C1Q6V0L0 522 aa10.29□□□□□ -0.76
TMEM39A-201ENST00000319172 DDX12PQ92771 950 aa10.29□□□□□ -0.76
TMEM39A-201ENST00000319172 CAPZA3Q96KX2 299 aa10.29□□□□□ -0.76
TMEM39A-201ENST00000319172 WDR11Q9BZH6 1224 aa10.29□□□□□ -0.76
TMEM39A-201ENST00000319172 PDGFDQ9GZP0 370 aaPredicted RBP10.29□□□□□ -0.76
TMEM39A-201ENST00000319172 SUGCTQ9HAC7 445 aa10.29□□□□□ -0.76
TMEM39A-201ENST00000319172 ARMCX3Q9UH62 379 aaPredicted RBP10.29□□□□□ -0.76
TMEM39A-201ENST00000319172 KCTD2Q14681 263 aa10.29□□□□□ -0.76
TMEM39A-201ENST00000319172 PTPAQ15257 358 aa10.29□□□□□ -0.76
TMEM39A-201ENST00000319172 EARS2Q5JPH6 523 aaKnown RBP10.29□□□□□ -0.76
TMEM39A-201ENST00000319172 APOBEC3FQ8IUX4 373 aaKnown RBP10.29□□□□□ -0.76
TMEM39A-201ENST00000319172 FNBP1Q96RU3 617 aa10.29□□□□□ -0.76
TMEM39A-201ENST00000319172 ZMYND12Q9H0C1 365 aa10.29□□□□□ -0.76
TMEM39A-201ENST00000319172 RPAP3Q9H6T3 665 aaPredicted RBP10.29□□□□□ -0.76
TMEM39A-201ENST00000319172 RNF146Q9NTX7 359 aa10.29□□□□□ -0.76
TMEM39A-201ENST00000319172 CTAGE9A4FU28 777 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 POTEFA5A3E0 1075 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 POTEB2H3BUK9 544 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 ONECUT3O60422 494 aaPredicted RBP10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 CCDC172P0C7W6 258 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 POTEIP0CG38 1075 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 CASP14P31944 242 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 UTP14CQ5TAP6 766 aaKnown RBP10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 PPP1R18Q6NYC8 613 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 POTEGQ6S5H5 508 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 POTEEQ6S8J3 1075 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 ILDR1Q86SU0 546 aaPredicted RBP10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 EHBP1Q8NDI1 1231 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 HACL1Q9UJ83 578 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 TACC1O75410 805 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 DNM2P50570 870 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 TYW1BQ6NUM6 668 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 C15orf52Q6ZUT6 534 aaKnown RBP10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 OTUD6AQ7L8S5 288 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 TMTC1Q8IUR5 882 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 ENGASEQ8NFI3 743 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 VCPKMTQ9H867 229 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 KDM3BQ7LBC6 1761 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 CLIC2O15247 247 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 XRCC5P13010 732 aaKnown RBP10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 TAL1P17542 331 aaPredicted RBP10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 OR8K1Q8NGG5 319 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 HPS3Q969F9 1004 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 AKT1S1Q96B36 256 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 IL17RAQ96F46 866 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 DHTKD1Q96HY7 919 aaPredicted RBP10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 MAP3K14Q99558 947 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 BEGAINQ9BUH8 593 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 IMPG2Q9BZV3 1241 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 PNMA2Q9UL42 364 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 SCN11AQ9UI33 1791 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 SLU7O95391 586 aaKnown RBP10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 NR2F2P24468 414 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 PRCPP42785 496 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 TGFB2P61812 414 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 STRN3Q13033 797 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 DPH6Q7L8W6 267 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 TRERF1Q96PN7 1200 aa10.28□□□□□ -0.76
TMEM39A-201ENST00000319172 LRRC37A3O60309 1634 aa10.27□□□□□ -0.76
TMEM39A-201ENST00000319172 CCNE1P24864 410 aa10.27□□□□□ -0.76
TMEM39A-201ENST00000319172 ZNF771Q7L3S4 317 aaPredicted RBP10.27□□□□□ -0.76
TMEM39A-201ENST00000319172 ARMC9Q7Z3E5 817 aa10.27□□□□□ -0.76
TMEM39A-201ENST00000319172 CCDC127Q96BQ5 260 aa10.27□□□□□ -0.76
TMEM39A-201ENST00000319172 SLC10A4Q96EP9 437 aa10.27□□□□□ -0.76
TMEM39A-201ENST00000319172 NUP58Q9BVL2 599 aa10.27□□□□□ -0.76
TMEM39A-201ENST00000319172 LSM14BQ9BX40 385 aaKnown RBP10.27□□□□□ -0.76
TMEM39A-201ENST00000319172 CENPHQ9H3R5 247 aa10.27□□□□□ -0.76
TMEM39A-201ENST00000319172 ARHGAP44Q17R89 818 aa10.27□□□□□ -0.77
TMEM39A-201ENST00000319172 METTL13Q8N6R0 699 aa10.27□□□□□ -0.77
TMEM39A-201ENST00000319172 ZKSCAN4Q969J2 545 aaPredicted RBP10.27□□□□□ -0.77
TMEM39A-201ENST00000319172 NACC1Q96RE7 527 aa10.27□□□□□ -0.77
TMEM39A-201ENST00000319172 RWDD2AQ9UIY3 292 aa10.27□□□□□ -0.77
TMEM39A-201ENST00000319172 RIOK3O14730 519 aaKnown RBP10.27□□□□□ -0.77
TMEM39A-201ENST00000319172 PRPF6O94906 941 aaKnown RBP10.27□□□□□ -0.77
TMEM39A-201ENST00000319172 RDXP35241 583 aaKnown RBP10.27□□□□□ -0.77
TMEM39A-201ENST00000319172 RGS22Q8NE09 1264 aa10.27□□□□□ -0.77
TMEM39A-201ENST00000319172 ZNF384Q8TF68 577 aa10.27□□□□□ -0.77
TMEM39A-201ENST00000319172 TSC1Q92574 1164 aa10.27□□□□□ -0.77
TMEM39A-201ENST00000319172 EMILIN3Q9NT22 766 aa10.27□□□□□ -0.77
TMEM39A-201ENST00000319172 SEPT9Q9UHD8 586 aaPredicted RBP10.27□□□□□ -0.77
TMEM39A-201ENST00000319172 EXOC7Q9UPT5 735 aa10.27□□□□□ -0.77
TMEM39A-201ENST00000319172 GAKO14976 1311 aa10.27□□□□□ -0.77
TMEM39A-201ENST00000319172 BANK1Q8NDB2 785 aa10.26□□□□□ -0.77
TMEM39A-201ENST00000319172 FBXO41Q8TF61 875 aa10.26□□□□□ -0.77
TMEM39A-201ENST00000319172 TRPC6Q9Y210 931 aa10.26□□□□□ -0.77
TMEM39A-201ENST00000319172 TMEM110-MUSTN1A8MSY1 372 aa10.26□□□□□ -0.77
TMEM39A-201ENST00000319172 CYTH3O43739 400 aa10.26□□□□□ -0.77
TMEM39A-201ENST00000319172 MYL1P05976 194 aa10.26□□□□□ -0.77
TMEM39A-201ENST00000319172 INPP5BP32019 993 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms