RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 TEX33O43247 280 aa15.9■□□□□ 0.14
VRK3-201ENST00000316763 PPP1R11O60927 126 aaPredicted RBP15.9■□□□□ 0.14
VRK3-201ENST00000316763 NAPAP54920 295 aa15.9■□□□□ 0.14
VRK3-201ENST00000316763 FKBP1BP68106 108 aa15.9■□□□□ 0.14
VRK3-201ENST00000316763 VGLL4Q14135 290 aa15.9■□□□□ 0.14
VRK3-201ENST00000316763 KARSQ15046 597 aaKnown RBP15.9■□□□□ 0.14
VRK3-201ENST00000316763 LDLRAD1Q5T700 205 aa15.9■□□□□ 0.14
VRK3-201ENST00000316763 SCYL3Q8IZE3 742 aa15.9■□□□□ 0.14
VRK3-201ENST00000316763 SPICE1Q8N0Z3 855 aa15.9■□□□□ 0.14
VRK3-201ENST00000316763 NELFBQ8WX92 580 aa15.9■□□□□ 0.14
VRK3-201ENST00000316763 CCDC51Q96ER9 411 aa15.9■□□□□ 0.14
VRK3-201ENST00000316763 CCSER1Q9C0I3 900 aa15.9■□□□□ 0.14
VRK3-201ENST00000316763 ITIH6Q6UXX5 1313 aa15.9■□□□□ 0.14
VRK3-201ENST00000316763 PBX1P40424 430 aa15.89■□□□□ 0.13
VRK3-201ENST00000316763 STIM1Q13586 685 aa15.89■□□□□ 0.13
VRK3-201ENST00000316763 NOL9Q5SY16 702 aaKnown RBP15.89■□□□□ 0.13
VRK3-201ENST00000316763 PPP1R18Q6NYC8 613 aa15.89■□□□□ 0.13
VRK3-201ENST00000316763 CCDC84Q86UT8 332 aaPredicted RBP15.89■□□□□ 0.13
VRK3-201ENST00000316763 CNGA4Q8IV77 575 aa15.89■□□□□ 0.13
VRK3-201ENST00000316763 ANKRD13AQ8IZ07 590 aa15.89■□□□□ 0.13
VRK3-201ENST00000316763 CLMNQ96JQ2 1002 aa15.89■□□□□ 0.13
VRK3-201ENST00000316763 MTRQ99707 1265 aa15.89■□□□□ 0.13
VRK3-201ENST00000316763 KIAA1683Q9H0B3 1180 aa15.89■□□□□ 0.13
VRK3-201ENST00000316763 CUEDC2Q9H467 287 aa15.89■□□□□ 0.13
VRK3-201ENST00000316763 MAGEF1Q9HAY2 307 aa15.89■□□□□ 0.13
VRK3-201ENST00000316763 PLA2G6O60733 806 aa15.88■□□□□ 0.13
VRK3-201ENST00000316763 CASQ1P31415 396 aa15.88■□□□□ 0.13
VRK3-201ENST00000316763 RBL2Q08999 1139 aa15.88■□□□□ 0.13
VRK3-201ENST00000316763 KCNB1Q14721 858 aa15.88■□□□□ 0.13
VRK3-201ENST00000316763 NONOQ15233 471 aaKnown RBP eCLIP15.88■□□□□ 0.13
VRK3-201ENST00000316763 ELF2Q15723 593 aa15.88■□□□□ 0.13
VRK3-201ENST00000316763 CCDC47Q96A33 483 aaKnown RBP15.88■□□□□ 0.13
VRK3-201ENST00000316763 AK8Q96MA6 479 aa15.88■□□□□ 0.13
VRK3-201ENST00000316763 PICK1Q9NRD5 415 aa15.88■□□□□ 0.13
VRK3-201ENST00000316763 OGFRQ9NZT2 677 aa15.88■□□□□ 0.13
VRK3-201ENST00000316763 CSADQ9Y600 493 aa15.88■□□□□ 0.13
VRK3-201ENST00000316763 SNCAIPQ9Y6H5 919 aa15.88■□□□□ 0.13
VRK3-201ENST00000316763 SMCO2A6NFE2 343 aa15.88■□□□□ 0.13
VRK3-201ENST00000316763 LRRC10BA6NIK2 292 aa15.88■□□□□ 0.13
VRK3-201ENST00000316763 N4BP3O15049 544 aa15.88■□□□□ 0.13
VRK3-201ENST00000316763 URI1O94763 535 aaPredicted RBP15.88■□□□□ 0.13
VRK3-201ENST00000316763 CCDC175P0C221 793 aa15.88■□□□□ 0.13
VRK3-201ENST00000316763 ORC2Q13416 577 aaPredicted RBP15.88■□□□□ 0.13
VRK3-201ENST00000316763 TRIM14Q14142 442 aa15.88■□□□□ 0.13
VRK3-201ENST00000316763 QRICH1Q2TAL8 776 aa15.88■□□□□ 0.13
VRK3-201ENST00000316763 SYDE2Q5VT97 1194 aa15.88■□□□□ 0.13
VRK3-201ENST00000316763 SMAP1Q8IYB5 467 aaPredicted RBP15.88■□□□□ 0.13
VRK3-201ENST00000316763 MNS1Q8NEH6 495 aa15.88■□□□□ 0.13
VRK3-201ENST00000316763 PHIPQ8WWQ0 1821 aa15.88■□□□□ 0.13
VRK3-201ENST00000316763 GTPBP4Q9BZE4 634 aaKnown RBP15.88■□□□□ 0.13
VRK3-201ENST00000316763 TMEM60Q9H2L4 133 aa15.88■□□□□ 0.13
VRK3-201ENST00000316763 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.88■□□□□ 0.13
VRK3-201ENST00000316763 V9GYY5 206 aaPredicted RBP15.88■□□□□ 0.13
VRK3-201ENST00000316763 PTPRAP18433 802 aa15.87■□□□□ 0.13
VRK3-201ENST00000316763 CDC25AP30304 524 aa15.87■□□□□ 0.13
VRK3-201ENST00000316763 STAT2P52630 851 aa15.87■□□□□ 0.13
VRK3-201ENST00000316763 GNG11P61952 73 aa15.87■□□□□ 0.13
VRK3-201ENST00000316763 CBX1P83916 185 aa15.87■□□□□ 0.13
VRK3-201ENST00000316763 KRT31Q15323 416 aa15.87■□□□□ 0.13
VRK3-201ENST00000316763 CDC37Q16543 378 aaPredicted RBP15.87■□□□□ 0.13
VRK3-201ENST00000316763 FAM83BQ5T0W9 1011 aa15.87■□□□□ 0.13
VRK3-201ENST00000316763 TOGARAM2Q6ZUX3 1019 aa15.87■□□□□ 0.13
VRK3-201ENST00000316763 LPAR1Q92633 364 aa15.87■□□□□ 0.13
VRK3-201ENST00000316763 COA7Q96BR5 231 aa15.87■□□□□ 0.13
VRK3-201ENST00000316763 WDR18Q9BV38 432 aa15.87■□□□□ 0.13
VRK3-201ENST00000316763 ELP3Q9H9T3 547 aa15.87■□□□□ 0.13
VRK3-201ENST00000316763 KCNJ18B7U540 433 aa15.86■□□□□ 0.13
VRK3-201ENST00000316763 MFAP3LO75121 409 aa15.86■□□□□ 0.13
VRK3-201ENST00000316763 OR52Z1P0C646 297 aa15.86■□□□□ 0.13
VRK3-201ENST00000316763 COPB1P53618 953 aaKnown RBP15.86■□□□□ 0.13
VRK3-201ENST00000316763 KCNJ12Q14500 433 aa15.86■□□□□ 0.13
VRK3-201ENST00000316763 TCP11X2Q5H9J9 407 aa15.86■□□□□ 0.13
VRK3-201ENST00000316763 CPLX3Q8WVH0 158 aa15.86■□□□□ 0.13
VRK3-201ENST00000316763 UNCXA6NJT0 531 aa15.86■□□□□ 0.13
VRK3-201ENST00000316763 CCT6AP40227 531 aaKnown RBP15.86■□□□□ 0.13
VRK3-201ENST00000316763 PRCPP42785 496 aa15.86■□□□□ 0.13
VRK3-201ENST00000316763 ZYXQ15942 572 aaKnown RBP15.86■□□□□ 0.13
VRK3-201ENST00000316763 NEK8Q86SG6 692 aa15.86■□□□□ 0.13
VRK3-201ENST00000316763 CNKSR2Q8WXI2 1034 aa15.86■□□□□ 0.13
VRK3-201ENST00000316763 PRR12Q9ULL5 1215 aa15.86■□□□□ 0.13
VRK3-201ENST00000316763 ZHX2Q9Y6X8 837 aa15.86■□□□□ 0.13
VRK3-201ENST00000316763 TMEM88BA6NKF7 163 aa15.85■□□□□ 0.13
VRK3-201ENST00000316763 CCNT1O60563 726 aaKnown RBP15.85■□□□□ 0.13
VRK3-201ENST00000316763 HUNKP57058 714 aa15.85■□□□□ 0.13
VRK3-201ENST00000316763 SAPCD2Q86UD0 394 aa15.85■□□□□ 0.13
VRK3-201ENST00000316763 CABP7Q86V35 215 aa15.85■□□□□ 0.13
VRK3-201ENST00000316763 ADSSL1Q8N142 457 aa15.85■□□□□ 0.13
VRK3-201ENST00000316763 CHURC1Q8WUH1 139 aa15.85■□□□□ 0.13
VRK3-201ENST00000316763 UBXN4Q92575 508 aa15.85■□□□□ 0.13
VRK3-201ENST00000316763 SLC10A4Q96EP9 437 aa15.85■□□□□ 0.13
VRK3-201ENST00000316763 RIC8AQ9NPQ8 531 aa15.85■□□□□ 0.13
VRK3-201ENST00000316763 KBTBD4Q9NVX7 518 aa15.85■□□□□ 0.13
VRK3-201ENST00000316763 GDAQ9Y2T3 454 aa15.85■□□□□ 0.13
VRK3-201ENST00000316763 SPDYE4A6NLX3 237 aa15.84■□□□□ 0.13
VRK3-201ENST00000316763 PSMA7O14818 248 aa15.84■□□□□ 0.13
VRK3-201ENST00000316763 RHOBTB3O94955 611 aa15.84■□□□□ 0.13
VRK3-201ENST00000316763 CASP14P31944 242 aa15.84■□□□□ 0.13
VRK3-201ENST00000316763 IKQ13123 557 aaPredicted RBP15.84■□□□□ 0.13
VRK3-201ENST00000316763 LETM2Q2VYF4 491 aa15.84■□□□□ 0.13
VRK3-201ENST00000316763 KMT5BQ4FZB7 885 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms