RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 MTG1Q9BT17 334 aaPredicted RBP22.94■■□□□ 1.26
PDZRN3-202ENST00000308537 MEIS2O14770 477 aa22.93■■□□□ 1.26
PDZRN3-202ENST00000308537 MMP3P08254 477 aa22.93■■□□□ 1.26
PDZRN3-202ENST00000308537 MYL3P08590 195 aa22.93■■□□□ 1.26
PDZRN3-202ENST00000308537 TRAF1Q13077 416 aa22.93■■□□□ 1.26
PDZRN3-202ENST00000308537 NFXL1Q6ZNB6 911 aa22.93■■□□□ 1.26
PDZRN3-202ENST00000308537 DHX32Q7L7V1 743 aaKnown RBP22.93■■□□□ 1.26
PDZRN3-202ENST00000308537 FANCBQ8NB91 859 aa22.93■■□□□ 1.26
PDZRN3-202ENST00000308537 PPP1R13LQ8WUF5 828 aa22.93■■□□□ 1.26
PDZRN3-202ENST00000308537 KAT2BQ92831 832 aa22.93■■□□□ 1.26
PDZRN3-202ENST00000308537 GPKOWQ92917 476 aaPredicted RBP eCLIP22.93■■□□□ 1.26
PDZRN3-202ENST00000308537 NOC4LQ9BVI4 516 aaKnown RBP22.93■■□□□ 1.26
PDZRN3-202ENST00000308537 PPP1R12CQ9BZL4 782 aa22.93■■□□□ 1.26
PDZRN3-202ENST00000308537 SLC12A7Q9Y666 1083 aa22.93■■□□□ 1.26
PDZRN3-202ENST00000308537 DOCK5Q9H7D0 1870 aa22.92■■□□□ 1.26
PDZRN3-202ENST00000308537 GH1P01241 217 aa22.92■■□□□ 1.26
PDZRN3-202ENST00000308537 CALM1P0DP23 149 aa22.92■■□□□ 1.26
PDZRN3-202ENST00000308537 CALM2P0DP24 149 aa22.92■■□□□ 1.26
PDZRN3-202ENST00000308537 CALM3P0DP25 149 aa22.92■■□□□ 1.26
PDZRN3-202ENST00000308537 HOXD8P13378 290 aaPredicted RBP22.92■■□□□ 1.26
PDZRN3-202ENST00000308537 CYP2C18P33260 490 aa22.92■■□□□ 1.26
PDZRN3-202ENST00000308537 HSPA4P34932 840 aa22.92■■□□□ 1.26
PDZRN3-202ENST00000308537 GNAQP50148 359 aa22.92■■□□□ 1.26
PDZRN3-202ENST00000308537 MRPS9P82933 396 aaKnown RBP22.92■■□□□ 1.26
PDZRN3-202ENST00000308537 SP2Q02086 613 aa22.92■■□□□ 1.26
PDZRN3-202ENST00000308537 NBPF20Q3BBV1 942 aa22.92■■□□□ 1.26
PDZRN3-202ENST00000308537 RASIP1Q5U651 963 aa22.92■■□□□ 1.26
PDZRN3-202ENST00000308537 MICU3Q86XE3 530 aa22.92■■□□□ 1.26
PDZRN3-202ENST00000308537 RRP36Q96EU6 259 aaKnown RBP22.92■■□□□ 1.26
PDZRN3-202ENST00000308537 ZFP91Q96JP5 570 aaPredicted RBP22.92■■□□□ 1.26
PDZRN3-202ENST00000308537 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.92■■□□□ 1.26
PDZRN3-202ENST00000308537 WNT8AQ9H1J5 351 aa22.92■■□□□ 1.26
PDZRN3-202ENST00000308537 FAM217BQ9NTX9 383 aaPredicted RBP22.92■■□□□ 1.26
PDZRN3-202ENST00000308537 TRMT13Q9NUP7 481 aaKnown RBP22.92■■□□□ 1.26
PDZRN3-202ENST00000308537 CNTNAP5Q8WYK1 1306 aa22.91■■□□□ 1.26
PDZRN3-202ENST00000308537 PIK3CDO00329 1044 aa22.91■■□□□ 1.26
PDZRN3-202ENST00000308537 TLR3O15455 904 aaKnown RBP22.91■■□□□ 1.26
PDZRN3-202ENST00000308537 CSF2RAP15509 400 aa22.91■■□□□ 1.26
PDZRN3-202ENST00000308537 USP17L6PQ6QN14 398 aa22.91■■□□□ 1.26
PDZRN3-202ENST00000308537 FCHSD1Q86WN1 690 aa22.91■■□□□ 1.26
PDZRN3-202ENST00000308537 CTAGE1Q96RT6 745 aa22.91■■□□□ 1.26
PDZRN3-202ENST00000308537 SCN5AQ14524 2016 aa22.91■■□□□ 1.26
PDZRN3-202ENST00000308537 hCG_1642624A0A1W2PR95 340 aa22.9■■□□□ 1.26
PDZRN3-202ENST00000308537 KPNA6O60684 536 aa22.9■■□□□ 1.26
PDZRN3-202ENST00000308537 MYCLP12524 364 aaPredicted RBP22.9■■□□□ 1.26
PDZRN3-202ENST00000308537 CPA1P15085 419 aa22.9■■□□□ 1.26
PDZRN3-202ENST00000308537 SEMA3FQ13275 785 aa22.9■■□□□ 1.26
PDZRN3-202ENST00000308537 TMEM240Q5SV17 173 aa22.9■■□□□ 1.26
PDZRN3-202ENST00000308537 BCAS3Q9H6U6 928 aa22.9■■□□□ 1.26
PDZRN3-202ENST00000308537 MTMR10Q9NXD2 777 aa22.9■■□□□ 1.26
PDZRN3-202ENST00000308537 SNX14Q9Y5W7 946 aa22.9■■□□□ 1.26
PDZRN3-202ENST00000308537 MRVI1Q9Y6F6 885 aa22.9■■□□□ 1.26
PDZRN3-202ENST00000308537 TANC1Q9C0D5 1861 aa22.9■■□□□ 1.26
PDZRN3-202ENST00000308537 TRIP12Q14669 1992 aaPredicted RBP22.89■■□□□ 1.26
PDZRN3-202ENST00000308537 MYSM1Q5VVJ2 828 aa22.89■■□□□ 1.25
PDZRN3-202ENST00000308537 FAM109BQ6ICB4 259 aaPredicted RBP22.89■■□□□ 1.25
PDZRN3-202ENST00000308537 NFRKBQ6P4R8 1299 aa22.89■■□□□ 1.25
PDZRN3-202ENST00000308537 DEFB123Q8N688 67 aa22.89■■□□□ 1.25
PDZRN3-202ENST00000308537 TET1Q8NFU7 2136 aa22.89■■□□□ 1.25
PDZRN3-202ENST00000308537 INPP4AQ96PE3 977 aaPredicted RBP22.89■■□□□ 1.25
PDZRN3-202ENST00000308537 HIPK3Q9H422 1215 aa22.89■■□□□ 1.25
PDZRN3-202ENST00000308537 UBA1P22314 1058 aaKnown RBP22.88■■□□□ 1.25
PDZRN3-202ENST00000308537 KRT32Q14532 448 aa22.88■■□□□ 1.25
PDZRN3-202ENST00000308537 BRDTQ58F21 947 aaPredicted RBP22.88■■□□□ 1.25
PDZRN3-202ENST00000308537 TYW1BQ6NUM6 668 aa22.88■■□□□ 1.25
PDZRN3-202ENST00000308537 CYP2C9P11712 490 aa22.87■■□□□ 1.25
PDZRN3-202ENST00000308537 CDC27P30260 824 aa22.87■■□□□ 1.25
PDZRN3-202ENST00000308537 CCND2P30279 289 aa22.87■■□□□ 1.25
PDZRN3-202ENST00000308537 ICAM3P32942 547 aa22.87■■□□□ 1.25
PDZRN3-202ENST00000308537 SMAD3P84022 425 aaKnown RBP22.87■■□□□ 1.25
PDZRN3-202ENST00000308537 PPIGQ13427 754 aaKnown RBP eCLIP22.87■■□□□ 1.25
PDZRN3-202ENST00000308537 HSDL1Q3SXM5 330 aa22.87■■□□□ 1.25
PDZRN3-202ENST00000308537 CELF3Q5SZQ8 465 aaKnown RBP22.87■■□□□ 1.25
PDZRN3-202ENST00000308537 SESTD1Q86VW0 696 aa22.87■■□□□ 1.25
PDZRN3-202ENST00000308537 CCDC82Q8N4S0 544 aa22.87■■□□□ 1.25
PDZRN3-202ENST00000308537 PPTC7Q8NI37 304 aa22.87■■□□□ 1.25
PDZRN3-202ENST00000308537 RNPC3Q96LT9 517 aaKnown RBP22.87■■□□□ 1.25
PDZRN3-202ENST00000308537 AGXT2Q9BYV1 514 aa22.87■■□□□ 1.25
PDZRN3-202ENST00000308537 HAS3O00219 553 aa22.86■■□□□ 1.25
PDZRN3-202ENST00000308537 F2P00734 622 aa22.86■■□□□ 1.25
PDZRN3-202ENST00000308537 CENPBP07199 599 aaPredicted RBP22.86■■□□□ 1.25
PDZRN3-202ENST00000308537 ACRP10323 421 aa22.86■■□□□ 1.25
PDZRN3-202ENST00000308537 TGFB3P10600 412 aa22.86■■□□□ 1.25
PDZRN3-202ENST00000308537 PTPN11Q06124 597 aaPredicted RBP22.86■■□□□ 1.25
PDZRN3-202ENST00000308537 LAMC2Q13753 1193 aa22.86■■□□□ 1.25
PDZRN3-202ENST00000308537 FBXL16Q8N461 479 aa22.86■■□□□ 1.25
PDZRN3-202ENST00000308537 TMEM199Q8N511 208 aa22.86■■□□□ 1.25
PDZRN3-202ENST00000308537 IL23AQ9NPF7 189 aa22.86■■□□□ 1.25
PDZRN3-202ENST00000308537 SEC63Q9UGP8 760 aaKnown RBP22.86■■□□□ 1.25
PDZRN3-202ENST00000308537 GGPS1O95749 300 aa22.85■■□□□ 1.25
PDZRN3-202ENST00000308537 NEFLP07196 543 aa22.85■■□□□ 1.25
PDZRN3-202ENST00000308537 RCAN1P53805 252 aa22.85■■□□□ 1.25
PDZRN3-202ENST00000308537 CCL23P55773 120 aa22.85■■□□□ 1.25
PDZRN3-202ENST00000308537 WWC2Q6AWC2 1192 aa22.85■■□□□ 1.25
PDZRN3-202ENST00000308537 KCNV1Q6PIU1 500 aa22.85■■□□□ 1.25
PDZRN3-202ENST00000308537 ZNF365Q70YC5 407 aa22.85■■□□□ 1.25
PDZRN3-202ENST00000308537 GUCD1Q96NT3 240 aa22.85■■□□□ 1.25
PDZRN3-202ENST00000308537 NID2Q14112 1375 aa22.85■■□□□ 1.25
PDZRN3-202ENST00000308537 CHD9Q3L8U1 2897 aa22.85■■□□□ 1.25
PDZRN3-202ENST00000308537 GBF1Q92538 1859 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms